MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70194 bp
Accession: NZ_CP020984 Location: 1..70194 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 Replicon: plasmid pA
Accession: NZ_CP020984 Location: 1..70194 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6990P_RS23075 () | 609..1427 | + | 819 | WP_039587854.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23080 () | 2130..2339 | + | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6990P_RS23085 () | 2424..3428 | + | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| XcfCFBP6990P_RS23090 () | 3502..3822 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XcfCFBP6990P_RS23095 () | 3858..4091 | + | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6990P_RS23100 () | 4158..6728 | + | 2571 | WP_039570074.1 | DUF853 family protein | - |
| XcfCFBP6990P_RS23105 () | 6747..7520 | + | 774 | WP_039570072.1 | conjugal transfer protein | - |
| XcfCFBP6990P_RS23715 () | 7517..7870 | + | 354 | WP_127446653.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23110 () | 8088..9566 | + | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6990P_RS23115 () | 9573..10283 | + | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| XcfCFBP6990P_RS23120 () | 10310..11302 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6990P_RS23125 () | 11318..12670 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6990P_RS23130 () | 12843..13049 | + | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23135 () | 13060..13299 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23140 () | 13372..13620 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23145 () | 13622..14452 | + | 831 | Protein_15 | DNA topoisomerase III | - |
| XcfCFBP6990P_RS23155 () | 14851..16170 | + | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6990P_RS23160 () | 16297..17589 | + | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23165 () | 17741..18271 | + | 531 | Protein_18 | DNA topoisomerase III | - |
| XcfCFBP6990P_RS23170 () | 18341..18478 | + | 138 | Protein_19 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6990P_RS23175 () | 18553..19107 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6990P_RS23180 () | 19121..19537 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6990P_RS23185 () | 19534..19788 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6990P_RS23190 () | 20000..20593 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6990P_RS23195 () | 20590..23619 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XcfCFBP6990P_RS23200 () | 23652..24610 | + | 959 | Protein_25 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6990P_RS23205 () | 24700..24948 | + | 249 | WP_042826723.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23220 () | 26232..27284 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP6990P_RS24050 () | 27419..27523 | - | 105 | Protein_28 | type III secretion system effector protein | - |
| XcfCFBP6990P_RS23230 () | 28206..29120 | + | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23235 () | 29113..29970 | + | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcfCFBP6990P_RS23240 () | 30149..30610 | + | 462 | WP_039731445.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23245 () | 30651..30887 | + | 237 | Protein_32 | hypothetical protein | - |
| XcfCFBP6990P_RS23250 () | 30891..31217 | + | 327 | WP_033481858.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23255 () | 31240..31839 | + | 600 | WP_022557725.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23260 () | 31876..32484 | - | 609 | WP_040965625.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23275 () | 33806..34129 | + | 324 | WP_022557721.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23280 () | 34689..34964 | + | 276 | WP_022557719.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23285 () | 35543..35941 | + | 399 | WP_039731964.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23290 () | 36068..36394 | + | 327 | Protein_39 | hypothetical protein | - |
| XcfCFBP6990P_RS23295 () | 36506..40522 | - | 4017 | WP_099802904.1 | TAL effector repeat-containing protein | - |
| XcfCFBP6990P_RS23305 () | 40779..41051 | + | 273 | Protein_41 | hypothetical protein | - |
| XcfCFBP6990P_RS23310 () | 41103..41330 | + | 228 | WP_022557753.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23315 () | 41558..41902 | + | 345 | WP_022557752.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23320 () | 42014..42598 | + | 585 | WP_022557751.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23325 () | 42952..43773 | + | 822 | WP_099802905.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23720 () | 44381..44719 | - | 339 | WP_099859120.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23330 () | 44791..45426 | + | 636 | WP_039572177.1 | AAA family ATPase | - |
| XcfCFBP6990P_RS23335 () | 45423..45758 | + | 336 | WP_039572180.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23340 () | 46002..46466 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XcfCFBP6990P_RS23345 () | 46471..47067 | + | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| XcfCFBP6990P_RS23350 () | 47060..47650 | + | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6990P_RS23355 () | 48261..50891 | + | 2631 | WP_039572187.1 | hypothetical protein | Relaxase |
| XcfCFBP6990P_RS24055 () | 51675..52947 | + | 1273 | Protein_53 | Conjugal transfer protein TraG | VF |
| XcfCFBP6990P_RS23365 () | 52944..53435 | + | 492 | WP_017171863.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23370 () | 53468..54007 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6990P_RS23375 () | 54173..54484 | - | 312 | WP_099802907.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23380 () | 54516..55742 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6990P_RS23385 () | 56124..56570 | + | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XcfCFBP6990P_RS23390 () | 56713..57102 | + | 390 | WP_039587855.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23395 () | 57678..58496 | + | 819 | WP_039587854.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23400 () | 59199..59408 | + | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6990P_RS23405 () | 59493..60497 | + | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| XcfCFBP6990P_RS23410 () | 60572..60892 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XcfCFBP6990P_RS23415 () | 60928..61161 | + | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6990P_RS23420 () | 61228..63798 | + | 2571 | WP_039570074.1 | DUF853 family protein | - |
| XcfCFBP6990P_RS23425 () | 63817..64590 | + | 774 | WP_039570072.1 | conjugal transfer protein | - |
| XcfCFBP6990P_RS23725 () | 64587..64940 | + | 354 | WP_127446653.1 | hypothetical protein | - |
| XcfCFBP6990P_RS23430 () | 65158..66636 | + | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6990P_RS23435 () | 66643..67351 | + | 709 | Protein_69 | conjugal transfer protein TrbF | - |
| XcfCFBP6990P_RS23440 () | 67378..68369 | + | 992 | Protein_70 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6990P_RS23445 () | 68385..69737 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6990P_RS23450 () | 69910..70116 | + | 207 | WP_017164026.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|