MGE detailed information
MGE type: Mobilizable plasmid MGE length: 39633 bp
Accession: NZ_CP020541 Location: 1..39633 Organism: Sphingobium herbicidovorans strain MH Replicon: plasmid pSHV2
Accession: NZ_CP020541 Location: 1..39633 Organism: Sphingobium herbicidovorans strain MH Replicon: plasmid pSHV2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6S01_RS20525 () | 1839..2234 | - | 396 | WP_081570631.1 | TetR/AcrR family transcriptional regulator | - |
| B6S01_RS20535 () | 2998..3378 | + | 381 | WP_051908312.1 | hypothetical protein | - |
| B6S01_RS20540 () | 3531..4745 | + | 1215 | WP_037466972.1 | phospholipase A | - |
| B6S01_RS20545 () | 4752..5363 | - | 612 | WP_051908308.1 | Phenazine biosynthesis protein PhzD1 | VF |
| B6S01_RS20550 () | 5587..5880 | - | 294 | Protein_5 | hypothetical protein | - |
| B6S01_RS20555 () | 6063..6359 | + | 297 | WP_037466905.1 | WGR domain-containing protein | - |
| B6S01_RS20560 () | 6377..7606 | - | 1230 | WP_081570634.1 | cobyric acid synthase | - |
| B6S01_RS20565 () | 8418..8747 | + | 330 | WP_037466903.1 | hypothetical protein | - |
| B6S01_RS20570 () | 9008..9256 | + | 249 | WP_007682496.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| B6S01_RS20575 () | 9253..9642 | + | 390 | WP_007682494.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| B6S01_RS20580 () | 9642..9947 | + | 306 | WP_007682492.1 | hypothetical protein | - |
| B6S01_RS20585 () | 9944..10342 | + | 399 | WP_037466900.1 | hypothetical protein | - |
| B6S01_RS20590 () | 10389..11303 | + | 915 | WP_081570639.1 | tyrosine-type recombinase/integrase | - |
| B6S01_RS20595 () | 11367..12463 | + | 1097 | Protein_14 | IS630 family transposase ISBj5 | Transposase |
| B6S01_RS20600 () | 12509..13810 | - | 1302 | WP_169802873.1 | IS701 family transposase ISBj6_B | Transposase |
| B6S01_RS20605 () | 14092..14817 | - | 726 | WP_157704848.1 | putative HTH-type transcriptional regulator YfiR | VF |
| B6S01_RS20610 () | 14849..16318 | - | 1470 | WP_017183071.1 | Outer membrane protein OprM | VF |
| B6S01_RS20615 () | 16321..19503 | - | 3183 | WP_037466956.1 | Multidrug resistance protein MexB | VF |
| B6S01_RS20620 () | 19510..20661 | - | 1152 | WP_026002373.1 | Toluene efflux pump periplasmic linker protein TtgA | VF |
| B6S01_RS20625 () | 20738..21371 | + | 634 | Protein_20 | TetR/AcrR family transcriptional regulator | - |
| B6S01_RS20630 () | 21523..21783 | + | 261 | WP_081570636.1 | hypothetical protein | - |
| B6S01_RS20635 () | 21813..22043 | - | 231 | WP_007684557.1 | hypothetical protein | - |
| B6S01_RS20640 () | 22148..22468 | - | 321 | WP_021246202.1 | type II toxin-antitoxin system YafQ family toxin | - |
| B6S01_RS20645 () | 22437..22718 | - | 282 | WP_007684554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| B6S01_RS21225 () | 22802..22981 | + | 180 | WP_157704849.1 | hypothetical protein | - |
| B6S01_RS20650 () | 23133..23776 | + | 644 | Protein_26 | transcription elongation protein SprT | - |
| B6S01_RS20655 () | 23846..24481 | + | 636 | WP_017183076.1 | AAA family ATPase | - |
| B6S01_RS20660 () | 24507..24773 | + | 267 | WP_017183077.1 | hypothetical protein | - |
| B6S01_RS20665 () | 24826..25716 | - | 891 | WP_017183078.1 | replication initiation protein | - |
| B6S01_RS20675 () | 26700..27071 | - | 372 | WP_156103373.1 | hypothetical protein | - |
| B6S01_RS20680 () | 27068..27571 | - | 504 | WP_145206920.1 | hypothetical protein | - |
| B6S01_RS20685 () | 27594..29251 | - | 1658 | Protein_32 | type IV secretory system conjugative DNA transfer family protein | - |
| B6S01_RS20690 () | 29254..29538 | - | 285 | WP_037466934.1 | antitoxin VbhA family protein | - |
| B6S01_RS20695 () | 29531..29809 | - | 279 | WP_037466931.1 | hypothetical protein | - |
| B6S01_RS20700 () | 29802..30356 | - | 555 | WP_037466930.1 | AAA family ATPase | - |
| B6S01_RS20705 () | 30349..30585 | - | 237 | WP_037466988.1 | conjugal transfer protein TraD | - |
| B6S01_RS20710 () | 30623..30931 | - | 309 | WP_037466927.1 | conjugal transfer protein TraD | - |
| B6S01_RS20715 () | 30924..31175 | - | 252 | WP_037466924.1 | hypothetical protein | - |
| B6S01_RS20720 () | 31346..34465 | + | 3120 | WP_037466985.1 | Mobilization protein A | Relaxase |
| B6S01_RS20725 () | 34476..35180 | + | 705 | WP_081570638.1 | hypothetical protein | - |
| B6S01_RS20730 () | 35187..35822 | + | 636 | WP_037466918.1 | GNAT family N-acetyltransferase | - |
| B6S01_RS20735 () | 35968..36360 | + | 393 | WP_051908325.1 | MarR family transcriptional regulator | - |
| B6S01_RS20740 () | 36357..38333 | + | 1977 | WP_051908322.1 | FUSC family protein | - |
| B6S01_RS20745 () | 38330..38539 | + | 210 | WP_037466980.1 | DUF1656 domain-containing protein | - |
| B6S01_RS20750 () | 38543..39451 | + | 909 | WP_051908320.1 | HlyD family secretion protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|