MGE detailed information
MGE type: Prophage MGE length: 61423 bp
Accession: NZ_CP020409 Location: 2869613..2931035 Organism: Yersinia sp. FDAARGOS_228 Replicon: chromosome
Accession: NZ_CP020409 Location: 2869613..2931035 Organism: Yersinia sp. FDAARGOS_228 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J67_RS13085 () | 2864691..2866073 | + | 1383 | WP_005183025.1 | ATP-dependent RNA helicase DbpA | - |
| A6J67_RS13090 () | 2866180..2866500 | + | 321 | WP_042569943.1 | YebG family protein | - |
| A6J67_RS13095 () | 2866540..2866848 | + | 309 | WP_042569942.1 | N(4)-acetylcytidine aminohydrolase | - |
| A6J67_RS13100 () | 2866938..2867309 | + | 372 | WP_172668583.1 | protein YebF | - |
| A6J67_RS13105 () | 2867544..2869598 | + | 2055 | WP_042569940.1 | prolyl oligopeptidase family serine peptidase | - |
| A6J67_RS13110 () | 2869613..2870272 | - | 660 | WP_005183018.1 | exodeoxyribonuclease X | - |
| A6J67_RS13115 () | 2870795..2871751 | + | 957 | WP_032905818.1 | prolyl aminopeptidase | - |
| A6J67_RS13120 () | 2871805..2872035 | - | 231 | WP_005183015.1 | DNA polymerase III subunit theta | - |
| A6J67_RS13125 () | 2872426..2872929 | + | 504 | WP_005183013.1 | non-heme ferritin | - |
| A6J67_RS13130 () | 2873318..2873704 | + | 387 | WP_005183010.1 | CopC domain-containing protein YobA | - |
| A6J67_RS13135 () | 2873706..2874590 | + | 885 | WP_050297378.1 | copper homeostasis membrane protein CopD | - |
| A6J67_RS13140 () | 2874687..2875028 | + | 342 | WP_005183006.1 | YebY family protein | - |
| - () | 2875214..2875297 | + | 84 | - | - | Toxin Detail |
| - () | 2875214..2875301 | - | 88 | - | - | Antitoxin Detail |
| A6J67_RS13145 () | 2875376..2876458 | - | 1083 | WP_080608185.1 | Chaperone protein DnaJ 2 ; Integrase | Integrase |
| A6J67_RS13150 () | 2876433..2876699 | - | 267 | WP_025378521.1 | excisionase | - |
| A6J67_RS13155 () | 2876772..2877284 | - | 513 | WP_080608186.1 | siphovirus Gp157 family protein | - |
| A6J67_RS13160 () | 2877281..2879374 | - | 2094 | WP_080608187.1 | hypothetical protein | - |
| A6J67_RS13165 () | 2879451..2879765 | - | 315 | WP_125461923.1 | hypothetical protein | - |
| A6J67_RS13170 () | 2879864..2880094 | - | 231 | WP_080608189.1 | hypothetical protein | - |
| A6J67_RS13175 () | 2880312..2880647 | - | 336 | WP_080608190.1 | hypothetical protein | - |
| A6J67_RS23305 () | 2880661..2880834 | - | 174 | WP_105877047.1 | DUF1482 family protein | - |
| A6J67_RS13180 () | 2880874..2881110 | - | 237 | WP_080608191.1 | hypothetical protein | - |
| A6J67_RS13185 () | 2881232..2881456 | - | 225 | WP_080608192.1 | hypothetical protein | - |
| A6J67_RS13190 () | 2881631..2882023 | - | 393 | WP_080608193.1 | helix-turn-helix domain-containing protein | - |
| A6J67_RS13195 () | 2882105..2882302 | + | 198 | WP_080608194.1 | helix-turn-helix domain-containing protein | - |
| A6J67_RS13200 () | 2882343..2882783 | + | 441 | WP_080608195.1 | tRNA-(guanine-N1)-methyltransferase | - |
| A6J67_RS13205 () | 2882797..2883048 | + | 252 | WP_080608196.1 | hypothetical protein | - |
| A6J67_RS13210 () | 2883041..2883229 | + | 189 | WP_080608197.1 | hypothetical protein | - |
| A6J67_RS13215 () | 2883242..2884276 | + | 1035 | WP_080608198.1 | hypothetical protein | - |
| A6J67_RS13220 () | 2884305..2884712 | + | 408 | WP_080608486.1 | replication protein | - |
| A6J67_RS13225 () | 2884727..2885227 | + | 501 | WP_080608199.1 | hypothetical protein | - |
| A6J67_RS13230 () | 2885224..2887389 | + | 2166 | WP_080608200.1 | DNA cytosine methyltransferase | - |
| A6J67_RS13235 () | 2887536..2887718 | + | 183 | WP_080608201.1 | hypothetical protein | - |
| A6J67_RS13245 () | 2887793..2888386 | + | 594 | WP_080608202.1 | DUF1367 family protein | - |
| A6J67_RS13250 () | 2888395..2888679 | + | 285 | WP_080608203.1 | DUF1364 domain-containing protein | - |
| A6J67_RS13255 () | 2888688..2889113 | + | 426 | WP_080608487.1 | antitermination protein Q | - |
| A6J67_RS13260 () | 2889886..2890764 | + | 879 | WP_050297974.1 | triacylglycerol lipase | - |
| A6J67_RS13265 () | 2890961..2891080 | + | 120 | WP_080608204.1 | HNH endonuclease | - |
| A6J67_RS13270 () | 2891071..2891193 | + | 123 | Protein_2503 | ogr/Delta-like zinc finger family protein | - |
| A6J67_RS13275 () | 2891317..2891643 | + | 327 | WP_050297973.1 | acid-activated periplasmic chaperone HdeA | - |
| A6J67_RS13285 () | 2892147..2892434 | - | 288 | WP_050297972.1 | DUF1883 domain-containing protein | - |
| A6J67_RS13290 () | 2892809..2893126 | + | 318 | WP_050287950.1 | hypothetical protein | - |
| A6J67_RS13295 () | 2893110..2893616 | + | 507 | WP_080608205.1 | lysozyme | - |
| A6J67_RS13300 () | 2893601..2893936 | + | 336 | WP_050297037.1 | DUF2570 domain-containing protein | - |
| A6J67_RS13305 () | 2894212..2894532 | - | 321 | WP_050089496.1 | hypothetical protein | - |
| A6J67_RS13310 () | 2894825..2895151 | + | 327 | WP_080608206.1 | hypothetical protein | - |
| A6J67_RS13315 () | 2895320..2895922 | + | 603 | WP_080608207.1 | hypothetical protein | - |
| A6J67_RS13320 () | 2895922..2897403 | + | 1482 | WP_080608208.1 | terminase | - |
| A6J67_RS13325 () | 2897448..2898890 | + | 1443 | WP_080608488.1 | DUF1073 domain-containing protein | - |
| A6J67_RS13330 () | 2898892..2899791 | + | 900 | WP_080608209.1 | phage head morphogenesis protein | - |
| A6J67_RS13335 () | 2899828..2900571 | + | 744 | WP_105165836.1 | hypothetical protein | - |
| A6J67_RS13340 () | 2900623..2901972 | + | 1350 | WP_080608211.1 | DUF2213 domain-containing protein | - |
| A6J67_RS13345 () | 2901973..2902401 | + | 429 | WP_050287253.1 | hypothetical protein | - |
| A6J67_RS13350 () | 2902412..2903494 | + | 1083 | WP_080608212.1 | hypothetical protein | - |
| A6J67_RS13355 () | 2903505..2903789 | + | 285 | WP_080608213.1 | hypothetical protein | - |
| A6J67_RS13360 () | 2903792..2904172 | + | 381 | WP_080608214.1 | hypothetical protein | - |
| A6J67_RS13365 () | 2904172..2904483 | + | 312 | WP_080608215.1 | hypothetical protein | - |
| A6J67_RS13370 () | 2904480..2904830 | + | 351 | WP_080608216.1 | hypothetical protein | - |
| A6J67_RS13375 () | 2904832..2905200 | + | 369 | WP_080608217.1 | hypothetical protein | - |
| A6J67_RS13380 () | 2905197..2905580 | + | 384 | WP_080608218.1 | hypothetical protein | - |
| A6J67_RS13385 () | 2905605..2906354 | + | 750 | WP_080608219.1 | Ig domain-containing protein | - |
| A6J67_RS13390 () | 2906494..2907183 | + | 690 | WP_080608220.1 | hypothetical protein | - |
| A6J67_RS13395 () | 2907176..2910928 | + | 3753 | WP_080608221.1 | tape measure protein | - |
| A6J67_RS13400 () | 2910925..2911398 | + | 474 | WP_080608222.1 | hypothetical protein | - |
| A6J67_RS13405 () | 2911398..2911868 | + | 471 | WP_080608223.1 | DUF1833 family protein | - |
| A6J67_RS13410 () | 2911904..2912296 | + | 393 | WP_080608224.1 | C40 family peptidase | - |
| A6J67_RS13415 () | 2912283..2914778 | + | 2496 | WP_080608225.1 | phage tail protein | - |
| A6J67_RS13420 () | 2914837..2917248 | + | 2412 | WP_080608226.1 | tail fiber domain-containing protein | - |
| A6J67_RS13425 () | 2917359..2918576 | - | 1218 | WP_080608227.1 | hypothetical protein | - |
| A6J67_RS13430 () | 2918929..2919555 | + | 627 | WP_080608228.1 | hypothetical protein | - |
| A6J67_RS13435 () | 2919954..2920925 | + | 972 | WP_080608229.1 | reverse transcriptase family protein | - |
| A6J67_RS13440 () | 2920922..2922250 | + | 1329 | WP_080608230.1 | ATP-binding protein | - |
| A6J67_RS13445 () | 2922318..2922545 | + | 228 | WP_080608231.1 | hypothetical protein | - |
| A6J67_RS13450 () | 2922695..2923234 | - | 540 | WP_080608232.1 | hypothetical protein | - |
| A6J67_RS13455 () | 2923329..2923679 | - | 351 | WP_080608233.1 | hypothetical protein | - |
| A6J67_RS13460 () | 2924112..2924339 | + | 228 | Protein_2540 | integrase | - |
| A6J67_RS13465 () | 2924793..2925539 | + | 747 | WP_080608234.1 | alpha/beta hydrolase | - |
| A6J67_RS13470 () | 2926167..2926355 | - | 189 | Protein_2542 | tyrosine-type recombinase/integrase | - |
| A6J67_RS13485 () | 2926810..2927268 | + | 459 | WP_050297751.1 | IS200-IS605 family transposase IS1541B | Transposase |
| A6J67_RS13490 () | 2927468..2927992 | - | 525 | WP_050297750.1 | hypothetical protein | - |
| A6J67_RS13495 () | 2928367..2928888 | + | 522 | WP_050297749.1 | GNAT family N-acetyltransferase | - |
| A6J67_RS13500 () | 2929194..2930606 | + | 1413 | WP_050088376.1 | hypothetical protein | - |
| A6J67_RS23490 () | 2930827..2931035 | - | 209 | Protein_2547 | integrase | - |
| A6J67_RS23495 () | 2931203..2931319 | - | 117 | WP_161597802.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| A6J67_RS13510 () | 2931429..2931866 | - | 438 | WP_005183002.1 | universal stress protein UspF | - |
| A6J67_RS13515 () | 2932296..2932472 | - | 177 | WP_032905817.1 | GhoT/OrtT family toxin | - |
| A6J67_RS13520 () | 2932819..2934078 | - | 1260 | WP_005182999.1 | mechanosensitive ion channel | - |
| A6J67_RS13525 () | 2934401..2935273 | + | 873 | WP_050297747.1 | 23S rRNA pseudouridine(2604) synthase RluF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|