MGE detailed information
MGE type: IScluster/Tn MGE length: 16385 bp
Accession: NZ_CP020337 Location: 343..16727 Organism: Shigella flexneri 4c strain 1602 Replicon: plasmid unnamed1
Accession: NZ_CP020337 Location: 343..16727 Organism: Shigella flexneri 4c strain 1602 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS654_RS25265 (BS654_25435) | 253..612 | + | 360 | Protein_1 | IS21 family transposase IS100 | Transposase |
| BS654_RS25270 (BS654_25440) | 594..1393 | - | 800 | Protein_2 | AraC family invasion system transcriptional regulator VirF | - |
| BS654_RS25275 (BS654_25445) | 1820..2221 | + | 402 | Protein_3 | integrase core domain-containing protein | - |
| BS654_RS25280 (BS654_25450) | 2403..2669 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| BS654_RS25285 (BS654_25455) | 2859..3556 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| BS654_RS25290 (BS654_25460) | 3817..5013 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| BS654_RS25295 (BS654_25465) | 5349..7040 | + | 1692 | WP_000597733.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| BS654_RS25300 (BS654_25470) | 7092..8300 | + | 1209 | Protein_8 | IS3 family transposase | - |
| BS654_RS25305 (BS654_25475) | 8343..8866 | - | 524 | Protein_9 | IS3 family transposase ISSfl11 | Transposase |
| BS654_RS25310 (BS654_25480) | 8934..9416 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| BS654_RS25315 (BS654_25485) | 9407..9709 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| BS654_RS25325 (BS654_25495) | 9981..10253 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| BS654_RS25330 (BS654_25500) | 10234..11442 | + | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| BS654_RS28570 | 11614..11742 | + | 129 | Protein_14 | IS5/IS1182 family transposase | - |
| BS654_RS25340 (BS654_25510) | 11891..13345 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| BS654_RS25345 (BS654_25515) | 13749..14368 | + | 620 | Protein_16 | IS1 family transposase IS1X2 | Transposase |
| BS654_RS25350 (BS654_25520) | 14418..15627 | + | 1210 | Protein_17 | IS3 family transposase | - |
| BS654_RS25355 (BS654_25525) | 15671..16081 | + | 411 | Protein_18 | IS66 family transposase ISEc47 | Transposase |
| BS654_RS25360 (BS654_25530) | 16113..16727 | + | 615 | Protein_19 | IS21 family transposase ISEc10 | Transposase |
| BS654_RS25365 (BS654_25535) | 16896..20990 | - | 4095 | WP_001034121.1 | serine protease autotransporter toxin SepA | - |
| BS654_RS25375 (BS654_25545) | 21392..21580 | + | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|