MGE detailed information
MGE type: IScluster/Tn MGE length: 43361 bp
Accession: NZ_CP020337 Location: 22172..65532 Organism: Shigella flexneri 4c strain 1602 Replicon: plasmid unnamed1
Accession: NZ_CP020337 Location: 22172..65532 Organism: Shigella flexneri 4c strain 1602 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS654_RS25375 (BS654_25545) | 21392..21580 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| BS654_RS25380 (BS654_25550) | 21590..22788 | + | 1199 | WP_094081567.1 | IS91 family transposase | - |
| BS654_RS25385 (BS654_25555) | 23001..23809 | + | 809 | WP_094096897.1 | IS5 family transposase ISSfl7 | Transposase |
| BS654_RS25390 (BS654_25565) | 23924..24955 | + | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| BS654_RS25395 (BS654_25575) | 25149..25839 | + | 691 | Protein_25 | IS1 family transposase | - |
| BS654_RS25400 (BS654_25580) | 25856..26035 | - | 180 | Protein_26 | transposase | - |
| BS654_RS25405 (BS654_25585) | 26364..28061 | + | 1698 | WP_064203851.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| BS654_RS25410 (BS654_25590) | 28489..30213 | + | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| BS654_RS25415 (BS654_25595) | 30265..31473 | + | 1209 | Protein_29 | IS3 family transposase | - |
| BS654_RS28575 (BS654_25600) | 31517..31729 | - | 213 | Protein_30 | DDE-type integrase/transposase/recombinase | - |
| BS654_RS25425 (BS654_25605) | 32004..32279 | + | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| BS654_RS25430 (BS654_25610) | 32477..33841 | + | 1365 | WP_000051931.1 | MFS transporter | - |
| BS654_RS25435 (BS654_25615) | 33891..34100 | + | 210 | Protein_33 | peptidoglycan-binding protein | - |
| BS654_RS25440 (BS654_25620) | 34194..34385 | - | 192 | Protein_34 | IS21 family transposase IS100 | Transposase |
| BS654_RS25445 (BS654_25625) | 34426..34923 | - | 498 | Protein_35 | IS66 family transposase ISEc47 | Transposase |
| BS654_RS25450 (BS654_25630) | 35026..36234 | - | 1209 | Protein_36 | IS3 family transposase | - |
| BS654_RS25455 (BS654_25635) | 36414..37148 | + | 735 | Protein_37 | IS21 family transposase IS100kyp | Transposase |
| BS654_RS25465 (BS654_25645) | 38712..38984 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| BS654_RS25475 (BS654_25650) | 39151..39270 | - | 120 | Protein_40 | IS66 family transposase ISCro1 | Transposase |
| BS654_RS25480 (BS654_25655) | 39387..41084 | - | 1698 | WP_024259347.1 | hypothetical protein | VF |
| BS654_RS25485 | 41160..41309 | + | 150 | Protein_42 | IS1 family transposase | - |
| BS654_RS25490 (BS654_25660) | 41413..42825 | - | 1413 | WP_001026857.1 | hypothetical protein | VF |
| BS654_RS28110 | 43275..43337 | + | 63 | Protein_44 | IS66 family transposase ISCro1 | Transposase |
| BS654_RS25495 (BS654_25665) | 43358..43579 | - | 222 | Protein_45 | IS66 family transposase ISCro1 | Transposase |
| BS654_RS25500 (BS654_25670) | 43722..43915 | - | 194 | Protein_46 | HNH endonuclease | - |
| BS654_RS25510 (BS654_25680) | 45119..45592 | - | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| BS654_RS25515 (BS654_25685) | 45697..46925 | + | 1229 | WP_167389526.1 | IS3 family transposase IS2 | Transposase |
| BS654_RS25520 (BS654_25690) | 47179..48375 | + | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| BS654_RS25525 (BS654_25695) | 48370..48794 | - | 425 | Protein_51 | hypothetical protein | - |
| BS654_RS25530 (BS654_25700) | 49022..49660 | - | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| BS654_RS25535 | 49645..49788 | - | 144 | Protein_53 | DUF3440 domain-containing protein | - |
| BS654_RS25550 (BS654_25715) | 52392..52673 | + | 282 | Protein_56 | IS4 family transposase ISSfl1 | Transposase |
| BS654_RS25555 (BS654_25720) | 52846..53331 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| BS654_RS25560 (BS654_25725) | 53319..53603 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| BS654_RS28580 | 54505..54669 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| BS654_RS25580 (BS654_25745) | 54923..56524 | - | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS25585 (BS654_25750) | 56521..56871 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS25590 (BS654_25755) | 56868..57542 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS25595 (BS654_25760) | 58114..59568 | + | 1455 | WP_015683184.1 | hypothetical protein | VF |
| BS654_RS25605 (BS654_25770) | 59906..60970 | + | 1065 | Protein_64 | IS3 family transposase IS600 | Transposase |
| BS654_RS25610 | 61011..61814 | + | 804 | Protein_65 | IS3 family transposase ISKpn38 | Transposase |
| BS654_RS29245 | 61929..62270 | + | 342 | Protein_66 | IS21 family transposase ISEc62 | Transposase |
| BS654_RS25615 (BS654_25785) | 62253..63090 | + | 838 | Protein_67 | IS21 family transposase ISEc62 | Transposase |
| BS654_RS25620 (BS654_25790) | 63140..64336 | - | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| BS654_RS25625 (BS654_25795) | 64528..65532 | - | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| BS654_RS29250 | 65879..66688 | + | 810 | Protein_70 | IS110 family transposase | - |
| BS654_RS25635 (BS654_25805) | 66885..67664 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| BS654_RS25640 (BS654_25810) | 68611..69540 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| BS654_RS25645 (BS654_25815) | 69757..69993 | - | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|