MGE detailed information
MGE type: Prophage MGE length: 52180 bp
Accession: NZ_CP020106 Location: 5087443..5139622 Organism: Escherichia coli strain 13E0780 Replicon: chromosome
Accession: NZ_CP020106 Location: 5087443..5139622 Organism: Escherichia coli strain 13E0780 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC780_RS27460 () | 5083294..5084709 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| EC780_RS27465 () | 5084792..5085775 | + | 984 | WP_000235516.1 | quinone oxidoreductase | - |
| EC780_RS27470 () | 5085941..5086183 | - | 243 | WP_000891402.1 | envelope stress response protein PspG | - |
| EC780_RS27475 () | 5086317..5087354 | - | 1038 | WP_000543841.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| EC780_RS27480 () | 5087443..5088540 | + | 1098 | WP_000332258.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EC780_RS27485 () | 5088602..5088850 | + | 249 | WP_001217547.1 | DinI-like family protein | - |
| EC780_RS29455 () | 5088987..5089070 | + | 84 | Protein_5025 | YkgJ family cysteine cluster protein | - |
| EC780_RS27490 () | 5089096..5089686 | - | 591 | WP_001132160.1 | hypothetical protein | VF |
| EC780_RS27495 () | 5089868..5090518 | + | 651 | WP_001144078.1 | hypothetical protein | VF |
| EC780_RS27500 () | 5090670..5091092 | - | 423 | WP_000442133.1 | hypothetical protein | VF |
| EC780_RS27505 () | 5091253..5091522 | - | 270 | WP_001023455.1 | phage tail fiber C-terminal domain-containing protein | - |
| EC780_RS27510 () | 5091524..5092828 | - | 1305 | WP_074390343.1 | ISNCY family transposase KIS | Transposase |
| EC780_RS27515 () | 5092893..5093492 | - | 600 | WP_047661541.1 | hypothetical protein | VF |
| EC780_RS27520 () | 5093559..5096957 | - | 3399 | WP_080029488.1 | host specificity protein J | - |
| EC780_RS27525 () | 5097193..5097825 | - | 633 | WP_123123568.1 | tail assembly protein | - |
| EC780_RS27530 () | 5097771..5098514 | - | 744 | WP_053895436.1 | C40 family peptidase | - |
| EC780_RS27535 () | 5098525..5099223 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| EC780_RS27540 () | 5099223..5099552 | - | 330 | WP_000847304.1 | phage tail protein | - |
| EC780_RS27545 () | 5099549..5102128 | - | 2580 | WP_047661462.1 | phage tail tape measure protein | - |
| EC780_RS27550 () | 5102109..5102522 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| EC780_RS27555 () | 5102549..5102980 | - | 432 | WP_000479116.1 | phage minor tail protein G | - |
| EC780_RS27560 () | 5102994..5103746 | - | 753 | WP_000235110.1 | phage tail protein | - |
| EC780_RS27565 () | 5103754..5104149 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| EC780_RS27570 () | 5104146..5104679 | - | 534 | WP_000974985.1 | phage tail protein | - |
| EC780_RS27575 () | 5104695..5105048 | - | 354 | WP_001204560.1 | tail attachment protein | - |
| EC780_RS27580 () | 5105041..5105424 | - | 384 | WP_080029489.1 | DNA-packaging protein FI | - |
| EC780_RS27585 () | 5105476..5106504 | - | 1029 | WP_000522623.1 | major capsid protein | - |
| EC780_RS27590 () | 5106562..5106909 | - | 348 | WP_000256821.1 | head decoration protein | - |
| EC780_RS27595 () | 5106946..5108451 | - | 1506 | WP_001253987.1 | S49 family peptidase | - |
| EC780_RS27600 () | 5108441..5110033 | - | 1593 | WP_001397759.1 | phage portal protein | - |
| EC780_RS27605 () | 5110030..5110236 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| EC780_RS27610 () | 5110220..5112148 | - | 1929 | WP_032314862.1 | phage terminase large subunit family protein | - |
| EC780_RS27615 () | 5112120..5112629 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| EC780_RS27620 () | 5113021..5113245 | + | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| EC780_RS27625 () | 5113327..5113641 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| EC780_RS29460 () | 5114168..5114353 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| EC780_RS29465 () | 5114576..5114722 | - | 147 | WP_000539795.1 | hypothetical protein | - |
| EC780_RS27640 () | 5114722..5115291 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| EC780_RS27645 () | 5115562..5116095 | - | 534 | WP_000992167.1 | lysozyme | - |
| EC780_RS27650 () | 5116146..5116489 | - | 344 | Protein_5058 | YdfR family protein | - |
| EC780_RS27655 () | 5116494..5116709 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| EC780_RS27665 () | 5117148..5118998 | - | 1851 | WP_064482927.1 | DUF1737 domain-containing protein | - |
| EC780_RS27685 () | 5119795..5120190 | - | 396 | Protein_5061 | site-specific DNA-methyltransferase | - |
| EC780_RS27690 () | 5120177..5120329 | - | 153 | WP_000917759.1 | hypothetical protein | - |
| EC780_RS27695 () | 5120545..5120925 | - | 381 | WP_001204806.1 | antitermination protein Q | - |
| EC780_RS27700 () | 5120943..5121932 | - | 990 | WP_001443262.1 | DUF968 domain-containing protein | - |
| EC780_RS27705 () | 5121942..5122457 | - | 516 | WP_001223333.1 | hypothetical protein | - |
| EC780_RS27710 () | 5122473..5123288 | - | 816 | WP_032314711.1 | KilA-N domain-containing protein | - |
| EC780_RS27715 () | 5123440..5123835 | - | 396 | WP_000767110.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EC780_RS27720 () | 5123832..5124158 | - | 327 | WP_000210151.1 | LexA family transcriptional regulator | - |
| EC780_RS27725 () | 5124155..5124808 | - | 654 | WP_001355692.1 | phage N-6-adenine-methyltransferase | - |
| EC780_RS29695 () | 5124903..5125895 | - | 993 | WP_000054957.1 | hypothetical protein | - |
| EC780_RS27735 () | 5125852..5126064 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| EC780_RS27740 () | 5126240..5126791 | - | 552 | WP_000515867.1 | hypothetical protein | - |
| EC780_RS27745 () | 5126835..5127035 | - | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| EC780_RS27750 () | 5127126..5127800 | + | 675 | WP_000859461.1 | LexA family transcriptional regulator | - |
| EC780_RS27765 () | 5128467..5128829 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| EC780_RS27770 () | 5128895..5129719 | + | 825 | WP_000081299.1 | DUF2303 family protein | - |
| EC780_RS27775 () | 5129847..5130371 | + | 525 | WP_000008182.1 | 5'-deoxynucleotidase | - |
| EC780_RS27780 () | 5130480..5131345 | + | 866 | Protein_5078 | hypothetical protein | - |
| EC780_RS27785 () | 5131386..5131667 | + | 282 | WP_001093922.1 | pyocin activator PrtN family protein | - |
| EC780_RS27790 () | 5131859..5132893 | - | 1035 | WP_001128527.1 | hypothetical protein | - |
| EC780_RS29700 () | 5133032..5133205 | - | 174 | WP_000390070.1 | hypothetical protein | - |
| EC780_RS27795 () | 5133245..5133631 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| EC780_RS27800 () | 5133661..5134233 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| EC780_RS27805 () | 5134468..5134590 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| EC780_RS27810 () | 5134953..5135938 | - | 986 | Protein_5085 | DUF2713 domain-containing protein | - |
| EC780_RS27820 () | 5136256..5136771 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| EC780_RS27825 () | 5136813..5137022 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| EC780_RS27830 () | 5137138..5138463 | - | 1326 | WP_001299473.1 | MATE family efflux transporter DinF | - |
| EC780_RS27835 () | 5138536..5139144 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| EC780_RS27840 () | 5139254..5139622 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| EC780_RS27845 () | 5139793..5142216 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| EC780_RS27850 () | 5142371..5143243 | - | 873 | WP_032314710.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| EC780_RS27855 () | 5143256..5143753 | - | 498 | WP_001297295.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|