MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46551 bp
Accession: NZ_CP019999 Location: 53323..99873 Organism: Dehalococcoides mccartyi strain KBTCE1 Replicon: chromosome
Accession: NZ_CP019999 Location: 53323..99873 Organism: Dehalococcoides mccartyi strain KBTCE1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1772_RS00260 () | 49881..52355 | + | 2475 | WP_011308690.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| B1772_RS00265 () | 52745..54139 | + | 1395 | WP_011308691.1 | DNA repair protein RadA | - |
| B1772_RS00270 () | 54126..54809 | + | 684 | WP_078986731.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | VF |
| B1772_RS00275 () | 54815..55288 | + | 474 | WP_011928579.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| B1772_RS00280 () | 55292..56665 | + | 1374 | WP_078986732.1 | cysteine--tRNA ligase | - |
| B1772_RS00285 () | 56933..57784 | + | 852 | WP_078987056.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B1772_RS00290 () | 57996..58517 | + | 522 | WP_078986733.1 | NYN domain-containing protein | - |
| B1772_RS00295 () | 58651..59808 | - | 1158 | WP_078986734.1 | hypothetical protein | - |
| B1772_RS07515 () | 60021..60176 | - | 156 | WP_154021692.1 | hypothetical protein | - |
| B1772_RS00300 () | 60369..60914 | - | 546 | WP_011928608.1 | AAA family ATPase | - |
| B1772_RS00305 () | 60918..61244 | - | 327 | WP_011928609.1 | hypothetical protein | - |
| B1772_RS00310 () | 61245..61823 | - | 579 | WP_078986735.1 | hypothetical protein | - |
| B1772_RS00315 () | 61816..62046 | - | 231 | WP_042377457.1 | hypothetical protein | - |
| B1772_RS00320 () | 62046..62342 | - | 297 | WP_058316897.1 | hypothetical protein | - |
| B1772_RS00325 () | 62342..63934 | - | 1593 | WP_078986736.1 | hypothetical protein | - |
| B1772_RS00330 () | 64011..64346 | - | 336 | WP_011928612.1 | hypothetical protein | - |
| B1772_RS00335 () | 64402..64794 | - | 393 | WP_011928613.1 | single-stranded DNA-binding protein | - |
| B1772_RS00340 () | 64835..65077 | - | 243 | WP_153300901.1 | hypothetical protein | - |
| B1772_RS00345 () | 65258..65890 | + | 633 | WP_078986738.1 | LexA family transcriptional regulator | - |
| B1772_RS00350 () | 66041..66523 | + | 483 | WP_078986739.1 | hypothetical protein | - |
| B1772_RS00355 () | 66547..67320 | + | 774 | WP_058316892.1 | hypothetical protein | - |
| B1772_RS00360 () | 67442..67780 | + | 339 | WP_058316891.1 | hypothetical protein | Toxin Detail |
| B1772_RS00365 () | 67773..68870 | + | 1098 | WP_058316890.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| B1772_RS00370 () | 69434..69742 | - | 309 | WP_011308733.1 | rubrerythrin | - |
| B1772_RS00375 () | 69931..71076 | - | 1146 | WP_061977017.1 | NTP transferase domain-containing protein | - |
| B1772_RS00380 () | 71077..71766 | - | 690 | WP_078986740.1 | hypothetical protein | - |
| B1772_RS00385 () | 71789..75001 | - | 3213 | WP_078986741.1 | molybdopterin-dependent oxidoreductase | - |
| B1772_RS00390 () | 74994..76175 | - | 1182 | WP_078986742.1 | polysulfide reductase NrfD | - |
| B1772_RS00395 () | 76196..77134 | - | 939 | WP_011308738.1 | 4Fe-4S dicluster domain-containing protein | - |
| B1772_RS00400 () | 77615..78601 | + | 987 | WP_011308739.1 | Iron-sulfur cluster carrier protein | VF |
| B1772_RS00405 () | 78719..79084 | - | 366 | WP_011308740.1 | hypothetical protein | - |
| B1772_RS00410 () | 79230..80069 | - | 840 | WP_011308741.1 | DegV family protein | - |
| B1772_RS00415 () | 80268..81572 | + | 1305 | WP_012984070.1 | LemA family protein | - |
| B1772_RS00420 () | 81635..83554 | + | 1920 | WP_078987057.1 | endonuclease/exonuclease/phosphatase family protein | - |
| B1772_RS00425 () | 83622..84104 | - | 483 | WP_011308744.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| B1772_RS00430 () | 84107..85687 | - | 1581 | WP_077997826.1 | nickel-dependent hydrogenase large subunit | - |
| B1772_RS00435 () | 85718..86782 | - | 1065 | WP_011308746.1 | hydrogenase small subunit | - |
| B1772_RS00440 () | 86835..87638 | - | 804 | WP_011308747.1 | 4Fe-4S dicluster domain-containing protein | - |
| B1772_RS00445 () | 88316..89389 | - | 1074 | WP_011308748.1 | ABC transporter permease | - |
| B1772_RS00450 () | 89386..90444 | - | 1059 | WP_012984073.1 | ABC transporter permease | - |
| B1772_RS00455 () | 90441..91307 | - | 867 | WP_078986743.1 | Fluoroquinolones export ATP-binding protein | VF |
| B1772_RS00460 () | 91319..91957 | - | 639 | WP_078986744.1 | TetR/AcrR family transcriptional regulator | - |
| B1772_RS00465 () | 92137..92679 | - | 543 | WP_011308752.1 | DJ-1/PfpI family protein | - |
| B1772_RS00470 () | 92973..94721 | + | 1749 | WP_015407389.1 | sodium-extruding oxaloacetate decarboxylase subunit alpha | - |
| B1772_RS00475 () | 94714..96210 | + | 1497 | WP_015407390.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| B1772_RS00480 () | 96207..96494 | - | 288 | WP_011308755.1 | 2TM domain-containing protein | - |
| B1772_RS00485 () | 96625..98427 | - | 1803 | WP_078986745.1 | 4Fe-4S binding protein | - |
| B1772_RS00490 () | 98969..100000 | + | 1032 | WP_012984080.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| B1772_RS00495 () | 100015..101139 | + | 1125 | WP_015406783.1 | anthranilate phosphoribosyltransferase | - |
| B1772_RS00500 () | 101227..104415 | - | 3189 | WP_015406784.1 | PAS domain S-box protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|