MGE detailed information
MGE type: Genomic_island MGE length: 54586 bp
Accession: NZ_CP019944 Location: 4183668..4238253 Organism: Escherichia coli strain DSM 103246 Replicon: chromosome
Accession: NZ_CP019944 Location: 4183668..4238253 Organism: Escherichia coli strain DSM 103246 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Eco28_RS21425 () | 4178855..4179874 | + | 1020 | WP_000671481.1 | nucleoside hydrolase | - |
| Eco28_RS21430 () | 4179938..4180651 | + | 714 | WP_001094740.1 | MgtC/SapB family protein | - |
| Eco28_RS21435 () | 4180808..4182181 | - | 1374 | Protein_3961 | IS4 family transposase | - |
| Eco28_RS21440 () | 4182227..4183236 | - | 1010 | Protein_3962 | IS256 family transposase | - |
| Eco28_RS21445 () | 4183668..4183946 | + | 279 | WP_000849708.1 | DUF5339 domain-containing protein | - |
| Eco28_RS21450 () | 4184284..4185315 | - | 1032 | WP_001033555.1 | isoaspartyl peptidase/L-asparaginase | - |
| Eco28_RS21460 () | 4185839..4186285 | - | 447 | WP_001333102.1 | maturase | - |
| Eco28_RS28665 () | 4186750..4186878 | + | 129 | Protein_3966 | transposase | - |
| Eco28_RS21470 () | 4186931..4188292 | - | 1362 | WP_000598813.1 | C4-dicarboxylate transporter DcuC | - |
| Eco28_RS21475 () | 4188289..4189545 | - | 1257 | WP_000355772.1 | peptidase T | - |
| Eco28_RS21480 () | 4190411..4191811 | + | 1401 | WP_065749833.1 | aspartate ammonia-lyase | - |
| Eco28_RS21485 () | 4191976..4193301 | + | 1326 | WP_072132100.1 | anaerobic C4-dicarboxylate transporter | - |
| Eco28_RS21490 () | 4193789..4194835 | + | 1047 | WP_001012364.1 | L-asparaginase 2 | - |
| Eco28_RS21495 () | 4195429..4196154 | - | 726 | WP_001067029.1 | two-component system response regulator DcuR | - |
| Eco28_RS21510 () | 4198672..4198838 | - | 167 | Protein_3974 | transposase domain-containing protein | - |
| Eco28_RS21515 () | 4199077..4199640 | - | 564 | WP_000282090.1 | inovirus-type Gp2 protein | - |
| Eco28_RS21525 () | 4200610..4202043 | - | 1434 | WP_000335705.1 | DUF3987 domain-containing protein | - |
| Eco28_RS21530 () | 4202292..4202519 | - | 228 | WP_000120395.1 | DUF3987 domain-containing protein | - |
| Eco28_RS21535 () | 4202625..4202852 | - | 228 | WP_000266639.1 | AlpA family phage regulatory protein | - |
| Eco28_RS21540 () | 4203544..4205175 | + | 1632 | WP_024198293.1 | hypothetical protein | - |
| Eco28_RS21545 () | 4205262..4205858 | - | 597 | WP_024233400.1 | hypothetical protein | - |
| Eco28_RS21555 () | 4206359..4207612 | - | 1254 | WP_000893255.1 | glutamate-5-semialdehyde dehydrogenase | - |
| Eco28_RS21560 () | 4207624..4208727 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| Eco28_RS21565 () | 4209015..4210070 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| Eco28_RS21570 () | 4210109..4210510 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| Eco28_RS21575 () | 4210568..4211812 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4211228..4211308 | - | 81 | NuclAT_13 | - | - |
| - () | 4211228..4211308 | - | 81 | NuclAT_13 | - | - |
| - () | 4211228..4211308 | - | 81 | NuclAT_13 | - | - |
| - () | 4211228..4211308 | - | 81 | NuclAT_13 | - | - |
| Eco28_RS21580 () | 4211904..4212362 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| Eco28_RS21585 () | 4212623..4214080 | + | 1458 | WP_001293010.1 | cytosol nonspecific dipeptidase | - |
| Eco28_RS21590 () | 4214137..4214658 | - | 522 | Protein_3988 | peptide chain release factor H | - |
| Eco28_RS21595 () | 4214657..4214860 | - | 204 | Protein_3989 | RNA ligase RtcB family protein | - |
| Eco28_RS21600 () | 4215106..4215558 | - | 453 | WP_021576988.1 | GNAT family N-acetyltransferase | - |
| Eco28_RS21605 () | 4215555..4216610 | - | 1056 | WP_001226161.1 | DNA polymerase IV | - |
| Eco28_RS21610 () | 4216681..4217466 | - | 786 | WP_000207555.1 | Chemotaxis protein LafU | VF |
| Eco28_RS21615 () | 4217438..4219150 | + | 1713 | Protein_3993 | Flagellar biosynthesis protein FlhA | VF |
| Eco28_RS21620 () | 4219383..4219778 | - | 396 | Protein_3994 | REP-associated tyrosine transposase RayT | - |
| Eco28_RS28490 () | 4221118..4221216 | - | 99 | Protein_3996 | transposase | - |
| Eco28_RS21630 () | 4221392..4222141 | - | 750 | WP_000056850.1 | Murein DD-endopeptidase MepH | VF |
| Eco28_RS21635 () | 4222351..4222611 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| Eco28_RS21640 () | 4222614..4222892 | + | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| Eco28_RS21645 () | 4223048..4223788 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| Eco28_RS21650 () | 4223759..4224526 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| Eco28_RS21655 () | 4224732..4225310 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| Eco28_RS21660 () | 4225550..4227994 | + | 2445 | WP_021576986.1 | Acyl-coenzyme A dehydrogenase | VF |
| Eco28_RS21665 () | 4228037..4228483 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| Eco28_RS21670 () | 4228664..4229434 | + | 771 | WP_021576985.1 | 2-oxoglutaramate amidase | - |
| Eco28_RS21675 () | 4229486..4229860 | - | 375 | Protein_4006 | ISAs1 family transposase | - |
| Eco28_RS21685 () | 4230132..4230809 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| Eco28_RS21690 () | 4230809..4231156 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| Eco28_RS21695 () | 4231176..4232747 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| Eco28_RS21700 () | 4232871..4233794 | - | 924 | WP_133302424.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| Eco28_RS21705 () | 4233866..4238253 | - | 4388 | Protein_4011 | hypothetical protein | VF |
| Eco28_RS21710 () | 4238329..4240470 | - | 2142 | WP_001695454.1 | type VI secretion system tip protein VgrG | - |
| Eco28_RS21720 () | 4240680..4241198 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| Eco28_RS21725 () | 4241895..4242395 | + | 501 | WP_000037397.1 | type VI secretion system contractile sheath small subunit | - |
| Eco28_RS21730 () | 4242430..4242654 | + | 225 | WP_000123970.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|