MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 95502 bp
Accession: NZ_CP019630 Location: 4027008..4122509 Organism: Labrenzia aggregata strain RMAR6-6 Replicon: chromosome
Accession: NZ_CP019630 Location: 4027008..4122509 Organism: Labrenzia aggregata strain RMAR6-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B0E33_RS18515 () | 4022962..4026786 | + | 3825 | WP_077292007.1 | SIR2 family protein | - |
| B0E33_RS18520 () | 4027471..4028316 | + | 846 | Protein_3667 | IS3 family transposase | - |
| B0E33_RS18525 () | 4028475..4029722 | - | 1248 | WP_208997888.1 | cation:dicarboxylase symporter family transporter | - |
| B0E33_RS18530 () | 4029926..4031083 | - | 1158 | WP_077292009.1 | pyridoxal-phosphate dependent enzyme | - |
| B0E33_RS18535 () | 4031085..4031483 | - | 399 | WP_077293435.1 | hypothetical protein | - |
| B0E33_RS18540 () | 4031606..4032232 | + | 627 | WP_206051375.1 | PAS domain-containing protein | - |
| B0E33_RS18545 () | 4032261..4032986 | - | 726 | WP_077292011.1 | carboxylesterase family protein | - |
| B0E33_RS18555 () | 4033248..4034117 | - | 870 | WP_208997664.1 | esterase family protein | - |
| B0E33_RS18560 () | 4034219..4034977 | - | 759 | WP_167579563.1 | alpha/beta fold hydrolase | - |
| B0E33_RS18565 () | 4035071..4035979 | - | 909 | WP_077292014.1 | LysR family transcriptional regulator | - |
| B0E33_RS18570 () | 4036113..4036625 | + | 513 | WP_077292015.1 | TRAP transporter small permease | - |
| B0E33_RS18575 () | 4036622..4037932 | + | 1311 | WP_077292016.1 | TRAP transporter large permease | - |
| B0E33_RS18580 () | 4037964..4039082 | + | 1119 | WP_077292017.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| B0E33_RS18585 () | 4039196..4039459 | - | 264 | Protein_3679 | IS3 family transposase ISXau3 | Transposase |
| B0E33_RS18600 () | 4040681..4041946 | + | 1266 | WP_077292020.1 | MFS transporter | - |
| B0E33_RS18605 () | 4042448..4043830 | - | 1383 | WP_077292021.1 | PLP-dependent aminotransferase family protein | - |
| B0E33_RS18610 () | 4043946..4044341 | + | 396 | WP_077292022.1 | RidA family protein | - |
| B0E33_RS18615 () | 4044344..4045357 | + | 1014 | WP_156912532.1 | threonine/serine dehydratase | - |
| B0E33_RS18620 () | 4045350..4046276 | + | 927 | WP_077292024.1 | dihydrodipicolinate synthase family protein | - |
| B0E33_RS18625 () | 4046329..4047240 | + | 912 | WP_077292025.1 | transporter substrate-binding domain-containing protein | - |
| B0E33_RS18630 () | 4047338..4048069 | + | 732 | WP_077292026.1 | amino acid ABC transporter permease | - |
| B0E33_RS18635 () | 4048075..4048767 | + | 693 | WP_077292027.1 | ABC transporter permease subunit | - |
| B0E33_RS18640 () | 4048809..4049570 | + | 762 | WP_077293439.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| B0E33_RS18645 () | 4050882..4051985 | + | 1104 | WP_077292028.1 | GntR family transcriptional regulator | - |
| B0E33_RS18650 () | 4052065..4053336 | + | 1272 | WP_077292029.1 | Gfo/Idh/MocA family oxidoreductase | - |
| B0E33_RS18655 () | 4053333..4054883 | + | 1551 | WP_077292030.1 | hypothetical protein | - |
| B0E33_RS18660 () | 4054906..4056168 | + | 1263 | WP_077292031.1 | ABC transporter substrate-binding protein | - |
| B0E33_RS18665 () | 4056217..4057170 | + | 954 | WP_156912433.1 | sugar ABC transporter permease | - |
| B0E33_RS18670 () | 4057167..4057997 | + | 831 | WP_077292033.1 | carbohydrate ABC transporter permease | - |
| B0E33_RS18675 () | 4058001..4059014 | + | 1014 | WP_077292034.1 | Maltose/maltodextrin import ATP-binding protein MalK | VF |
| B0E33_RS18680 () | 4059020..4060006 | + | 987 | WP_077293441.1 | carbohydrate kinase family protein | - |
| B0E33_RS18685 () | 4060003..4061385 | + | 1383 | WP_167579564.1 | sulfatase | - |
| B0E33_RS18690 () | 4061628..4062143 | + | 516 | WP_077292036.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| B0E33_RS18695 () | 4062140..4062763 | + | 624 | WP_156912434.1 | hypothetical protein | - |
| B0E33_RS18705 () | 4063111..4063761 | - | 651 | WP_077292039.1 | DNA oxidative demethylase AlkB | - |
| B0E33_RS18710 () | 4063763..4064395 | - | 633 | WP_077292040.1 | hypothetical protein | - |
| B0E33_RS18715 () | 4064654..4065769 | - | 1116 | WP_077292041.1 | hypothetical protein | - |
| B0E33_RS18720 () | 4065772..4066992 | - | 1221 | WP_077292042.1 | hypothetical protein | - |
| B0E33_RS18725 () | 4067144..4067902 | - | 759 | WP_077292043.1 | Dihydroanticapsin 7-dehydrogenase | VF |
| B0E33_RS18730 () | 4068109..4069164 | - | 1056 | WP_077292044.1 | Bifunctional transcriptional activator/DNA repair enzyme Ada | VF |
| B0E33_RS18735 () | 4069272..4069991 | - | 720 | WP_077293443.1 | 2OG-Fe(II) oxygenase | - |
| B0E33_RS18740 () | 4070464..4070709 | - | 246 | WP_156912435.1 | hypothetical protein | - |
| B0E33_RS18745 () | 4071054..4071947 | - | 894 | WP_077292046.1 | LysR family transcriptional regulator | - |
| B0E33_RS18750 () | 4072047..4072427 | + | 381 | WP_077292047.1 | ectoine synthase | - |
| B0E33_RS18760 () | 4072620..4074029 | + | 1410 | WP_077292049.1 | Glutamyl-tRNA(Gln) amidotransferase subunit A | VF |
| B0E33_RS18765 () | 4074212..4074946 | + | 735 | WP_206051376.1 | transporter substrate-binding domain-containing protein | - |
| B0E33_RS18770 () | 4075019..4076518 | + | 1500 | WP_077292051.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| B0E33_RS18775 () | 4076691..4077374 | - | 684 | WP_077293445.1 | cyclase family protein | - |
| B0E33_RS18780 () | 4077607..4078542 | - | 936 | WP_077292052.1 | Hydrogen peroxide-inducible genes activator | VF |
| B0E33_RS18785 () | 4078643..4079215 | + | 573 | WP_077292053.1 | phosphonopyruvate decarboxylase | - |
| B0E33_RS18790 () | 4079221..4079808 | + | 588 | WP_077293447.1 | aldehyde dehydrogenase | - |
| B0E33_RS18795 () | 4079817..4081295 | + | 1479 | WP_077292054.1 | aldehyde dehydrogenase | - |
| B0E33_RS18800 () | 4081451..4082176 | + | 726 | WP_077292055.1 | Transcriptional activator protein LuxR | VF |
| B0E33_RS18805 () | 4082265..4082903 | + | 639 | WP_077292056.1 | Acyl-homoserine-lactone synthase | VF |
| B0E33_RS18810 () | 4083365..4083733 | + | 369 | WP_077292057.1 | DUF2285 domain-containing protein | - |
| B0E33_RS18815 () | 4083752..4084024 | - | 273 | WP_077292058.1 | DUF2285 domain-containing protein | - |
| B0E33_RS18820 () | 4084138..4084377 | + | 240 | WP_077292059.1 | helix-turn-helix domain-containing protein | - |
| B0E33_RS18825 () | 4084611..4085615 | - | 1005 | WP_156912534.1 | transcriptional regulator FtrA | - |
| B0E33_RS18830 () | 4085697..4086095 | + | 399 | WP_077292061.1 | rhodanese-like domain-containing protein | - |
| B0E33_RS18835 () | 4086167..4086490 | - | 324 | WP_077293449.1 | hypothetical protein | - |
| B0E33_RS18840 () | 4086718..4088211 | + | 1494 | WP_077292062.1 | IS607 family transposase ISTko2 | Transposase |
| B0E33_RS18845 () | 4088211..4089089 | + | 879 | WP_077292063.1 | ParB N-terminal domain-containing protein | - |
| B0E33_RS18850 () | 4089097..4090005 | + | 909 | WP_077292064.1 | ParB N-terminal domain-containing protein | - |
| B0E33_RS18855 () | 4090298..4091212 | + | 915 | WP_167579654.1 | thermonuclease family protein | - |
| B0E33_RS18860 () | 4091240..4092211 | - | 972 | WP_077292066.1 | SH3 domain-containing protein | - |
| B0E33_RS18865 () | 4092846..4093853 | + | 1008 | WP_156912437.1 | MarR family transcriptional regulator | - |
| B0E33_RS18870 () | 4093847..4094611 | + | 765 | WP_077292068.1 | hypothetical protein | - |
| B0E33_RS31210 () | 4094608..4094967 | + | 360 | WP_206051379.1 | hypothetical protein | - |
| B0E33_RS18880 () | 4094977..4095432 | + | 456 | WP_077292069.1 | hypothetical protein | - |
| B0E33_RS31300 () | 4096417..4098180 | - | 1764 | Protein_3735 | ATP-binding protein | - |
| B0E33_RS18890 () | 4098440..4099669 | - | 1230 | WP_208997889.1 | nuclease PIN | - |
| B0E33_RS18895 () | 4099891..4101648 | - | 1758 | WP_077293451.1 | SIR2 family protein | - |
| B0E33_RS18900 () | 4102159..4103196 | - | 1038 | WP_077293453.1 | endonuclease/exonuclease/phosphatase family protein | - |
| B0E33_RS18905 () | 4103676..4104224 | + | 549 | WP_077292071.1 | antirestriction protein ArdA | - |
| B0E33_RS18910 () | 4104353..4106065 | + | 1713 | WP_077292072.1 | ParB/RepB/Spo0J family partition protein | - |
| B0E33_RS18915 () | 4106784..4107110 | + | 327 | WP_077293455.1 | DUF736 domain-containing protein | - |
| B0E33_RS18920 () | 4107345..4107557 | + | 213 | WP_077292073.1 | helix-turn-helix domain-containing protein | - |
| B0E33_RS18925 () | 4107550..4108032 | + | 483 | WP_167579565.1 | DUF2840 domain-containing protein | - |
| B0E33_RS18930 () | 4108029..4108532 | + | 504 | WP_077292075.1 | S26 family signal peptidase | - |
| B0E33_RS18935 () | 4108783..4110783 | + | 2001 | WP_077292076.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| B0E33_RS18940 () | 4110792..4112111 | - | 1320 | WP_077292077.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| B0E33_RS18945 () | 4112108..4112458 | - | 351 | WP_077292078.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| B0E33_RS18950 () | 4112904..4114931 | + | 2028 | WP_077292079.1 | Conjugal transfer protein TraG | VF |
| B0E33_RS18955 () | 4114942..4115451 | + | 510 | WP_156912438.1 | CopG family transcriptional regulator | - |
| B0E33_RS18960 () | 4115489..4116424 | + | 936 | WP_156912535.1 | Type IV secretion system protein PtlH | VF |
| B0E33_RS18965 () | 4116440..4116769 | + | 330 | WP_077292082.1 | TrbC/VirB2 family protein | - |
| B0E33_RS18970 () | 4116769..4117026 | + | 258 | WP_077292083.1 | VirB3 family type IV secretion system protein | - |
| B0E33_RS18975 () | 4117020..4119467 | + | 2448 | WP_077292084.1 | conjugal transfer protein TrbE | - |
| B0E33_RS18980 () | 4119467..4120177 | + | 711 | WP_167579566.1 | P-type conjugative transfer protein TrbJ | - |
| B0E33_RS18985 () | 4120279..4121610 | + | 1332 | WP_077292086.1 | P-type conjugative transfer protein TrbL | - |
| B0E33_RS18990 () | 4121621..4122319 | + | 699 | WP_077292087.1 | conjugal transfer protein TrbF | - |
| B0E33_RS18995 () | 4122319..4123356 | + | 1038 | WP_206051382.1 | P-type conjugative transfer protein TrbG | - |
| B0E33_RS19000 () | 4123353..4124648 | + | 1296 | WP_077292088.1 | TrbI/VirB10 family protein | - |
| B0E33_RS19005 () | 4124645..4124902 | + | 258 | WP_077292089.1 | DUF2274 domain-containing protein | - |
| B0E33_RS19010 () | 4124905..4125213 | + | 309 | WP_077292090.1 | DUF736 domain-containing protein | - |
| B0E33_RS19015 () | 4125536..4126996 | - | 1461 | WP_077292091.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|