MGE detailed information
MGE type: Conjugative plasmid MGE length: 148529 bp
Accession: NZ_CP019561 Location: 1..148529 Organism: Escherichia coli strain KSC1031 Replicon: plasmid pMRGN1031
Accession: NZ_CP019561 Location: 1..148529 Organism: Escherichia coli strain KSC1031 Replicon: plasmid pMRGN1031
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZY78_RS24125 () | 232..579 | - | 348 | WP_087548951.1 | hypothetical protein | - |
| BZY78_RS24130 () | 692..1678 | + | 987 | Protein_1 | Outer membrane usher protein YehB | VF |
| BZY78_RS24135 () | 1694..2749 | + | 1056 | Protein_2 | fimbrial protein | - |
| BZY78_RS24145 () | 2802..3506 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BZY78_RS24150 () | 3782..4726 | - | 945 | Protein_4 | IS110 family transposase IS5708 | Transposase |
| BZY78_RS24160 () | 4794..5498 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BZY78_RS24170 () | 5754..6107 | + | 354 | Protein_6 | RNA 3'-terminal phosphate cyclase | - |
| BZY78_RS24175 () | 6150..8855 | - | 2706 | WP_016240421.1 | HTH-type transcriptional regulator MalT | VF |
| BZY78_RS24180 () | 9184..9881 | + | 698 | Protein_8 | IS1 family transposase IS1R | Transposase |
| BZY78_RS24185 () | 9978..10187 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| BZY78_RS24190 () | 10139..10375 | + | 237 | WP_197689385.1 | hypothetical protein | - |
| BZY78_RS24200 () | 10426..11123 | + | 698 | Protein_11 | IS1 family transposase IS1G | Transposase |
| BZY78_RS24205 () | 11321..11764 | + | 444 | WP_197689384.1 | Type-1 fimbrial protein, A chain | VF |
| BZY78_RS24210 () | 11974..12671 | + | 698 | Protein_13 | IS1 family transposase IS1X3 | Transposase |
| BZY78_RS24215 () | 12735..14258 | - | 1524 | WP_087548941.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| BZY78_RS24220 () | 14693..15920 | - | 1228 | Protein_15 | IS3 family transposase IS2 | Transposase |
| BZY78_RS24225 () | 16015..16431 | - | 417 | WP_087548942.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BZY78_RS24230 () | 16428..16658 | - | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BZY78_RS24235 () | 16939..17199 | + | 261 | WP_032280099.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| BZY78_RS24240 () | 17234..17482 | + | 249 | WP_071787159.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BZY78_RS24245 () | 17707..18141 | - | 435 | WP_058799199.1 | copper resistance system metallochaperone PcoE | - |
| BZY78_RS24250 () | 18359..19759 | - | 1401 | WP_087548943.1 | copper resistance membrane spanning protein PcoS | - |
| BZY78_RS24255 () | 19756..20436 | - | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| BZY78_RS24260 () | 20491..21420 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| BZY78_RS24265 () | 21425..21805 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| BZY78_RS24270 () | 21845..22735 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| BZY78_RS24275 () | 22741..24105 | - | 1365 | Protein_26 | multicopper oxidase PcoA | - |
| BZY78_RS24280 () | 24160..25272 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| BZY78_RS24285 () | 25443..25907 | - | 465 | Protein_28 | multicopper oxidase PcoA | - |
| BZY78_RS24290 () | 26142..26591 | + | 450 | WP_001023231.1 | hypothetical protein | - |
| BZY78_RS24295 () | 26866..27603 | + | 738 | WP_000287499.1 | Murein DD-endopeptidase MepM | VF |
| BZY78_RS24300 () | 27637..27834 | - | 198 | WP_000843496.1 | DUF2933 domain-containing protein | - |
| BZY78_RS24305 () | 27875..30352 | - | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| BZY78_RS24310 () | 30449..30889 | - | 441 | WP_000758221.1 | hypothetical protein | - |
| BZY78_RS24315 () | 30976..34122 | - | 3147 | WP_011251357.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| BZY78_RS24320 () | 34133..35425 | - | 1293 | WP_001381488.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| BZY78_RS24325 () | 35539..35892 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| BZY78_RS24330 () | 35920..37305 | - | 1386 | WP_022630604.1 | Cation efflux system protein CusC | VF |
| BZY78_RS24340 () | 37495..38175 | + | 681 | WP_000697965.1 | Transcriptional regulatory protein CusR | VF |
| BZY78_RS24345 () | 38168..39643 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| BZY78_RS24350 () | 39894..40325 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| BZY78_RS24355 () | 40469..40819 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| BZY78_RS24360 () | 41207..42115 | - | 909 | WP_001372261.1 | HNH endonuclease | - |
| BZY78_RS24365 () | 42753..43727 | + | 975 | WP_011251353.1 | sensor domain-containing diguanylate cyclase | - |
| BZY78_RS24370 () | 44164..44370 | + | 207 | Protein_44 | hypothetical protein | - |
| BZY78_RS24375 () | 44726..45334 | + | 609 | WP_001375052.1 | hypothetical protein | - |
| BZY78_RS24380 () | 45402..46184 | + | 783 | WP_011251351.1 | site-specific integrase | - |
| BZY78_RS24385 () | 46415..47992 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| BZY78_RS24390 () | 48302..48862 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| BZY78_RS24395 () | 48866..51832 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BZY78_RS24400 () | 51890..52132 | + | 243 | WP_000844627.1 | transposase | - |
| BZY78_RS24405 () | 52164..52814 | - | 651 | WP_063091327.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BZY78_RS24410 () | 52920..54119 | + | 1200 | WP_077519757.1 | Tetracycline resistance protein, class C | ARG |
| BZY78_RS24415 () | 54151..55035 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| BZY78_RS24420 () | 55173..55580 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| BZY78_RS24425 () | 55569..57320 | + | 1752 | Protein_55 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BZY78_RS24430 () | 57456..57731 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| BZY78_RS24435 () | 57725..58369 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| BZY78_RS24440 () | 58598..59569 | + | 972 | WP_011251350.1 | stable plasmid inheritance protein A | - |
| BZY78_RS24445 () | 59574..59966 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| BZY78_RS24450 () | 59971..61242 | - | 1272 | WP_011251349.1 | Y-family DNA polymerase | - |
| BZY78_RS24455 () | 61242..61679 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BZY78_RS24460 () | 61676..61924 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| BZY78_RS24470 () | 62342..63243 | + | 902 | Protein_63 | DUF1281 domain-containing protein | - |
| BZY78_RS24475 () | 63240..63551 | + | 312 | WP_032260789.1 | hypothetical protein | - |
| BZY78_RS24480 () | 63627..64310 | + | 684 | WP_000086148.1 | DNA methylase | - |
| BZY78_RS24485 () | 64311..64532 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| BZY78_RS24490 () | 64546..64980 | + | 435 | WP_011251364.1 | DUF1380 family protein | - |
| BZY78_RS25740 () | 65026..65802 | + | 777 | WP_011251365.1 | hypothetical protein | - |
| BZY78_RS24505 () | 66337..66639 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| BZY78_RS24510 () | 66686..67108 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| BZY78_RS24515 () | 67105..67296 | + | 192 | WP_047402326.1 | hypothetical protein | - |
| BZY78_RS24530 () | 68331..68561 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| BZY78_RS24535 () | 68613..69974 | + | 1362 | WP_000170724.1 | DUF3560 domain-containing protein | - |
| BZY78_RS24540 () | 70022..70585 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| BZY78_RS24545 () | 70611..70820 | + | 210 | WP_032151920.1 | hypothetical protein | - |
| BZY78_RS25745 () | 71231..71437 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| BZY78_RS24570 () | 71463..72002 | + | 540 | WP_000290838.1 | single-stranded DNA-binding protein | - |
| BZY78_RS24575 () | 72065..72298 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| BZY78_RS24580 () | 72364..74322 | + | 1959 | WP_047402320.1 | ParB/RepB/Spo0J family partition protein | - |
| BZY78_RS24585 () | 74377..74811 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| BZY78_RS24590 () | 74808..75527 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| BZY78_RS25605 () | 75539..75727 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 75539..75763 | + | 225 | NuclAT_0 | - | - |
| - () | 75539..75763 | + | 225 | NuclAT_0 | - | - |
| - () | 75539..75763 | + | 225 | NuclAT_0 | - | - |
| - () | 75539..75763 | + | 225 | NuclAT_0 | - | - |
| BZY78_RS24595 () | 75807..75965 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| BZY78_RS24615 () | 77010..78014 | - | 1005 | WP_024257664.1 | IS110 family transposase IS1663 | Transposase |
| BZY78_RS24620 () | 78265..78552 | + | 288 | WP_000107548.1 | hypothetical protein | - |
| BZY78_RS24625 () | 78671..79492 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| BZY78_RS24630 () | 79789..80391 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| BZY78_RS24635 () | 80712..81095 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| BZY78_RS24640 () | 81282..81971 | + | 690 | WP_047402313.1 | conjugal transfer transcriptional regulator TraJ | - |
| BZY78_RS24645 () | 82070..82465 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| BZY78_RS24650 () | 82498..82860 | + | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| BZY78_RS24655 () | 82865..83176 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| BZY78_RS24660 () | 83198..83764 | + | 567 | WP_042973370.1 | type IV conjugative transfer system protein TraE | - |
| BZY78_RS24665 () | 83775..84479 | + | 705 | WP_149010242.1 | type-F conjugative transfer system secretin TraK | - |
| BZY78_RS24670 () | 84479..85906 | + | 1428 | WP_047402310.1 | conjugal transfer protein TraB | - |
| BZY78_RS24675 () | 85896..86483 | + | 588 | WP_000002772.1 | conjugal transfer protein TraP | - |
| BZY78_RS24680 () | 86422..86790 | + | 369 | WP_072022774.1 | conjugal transfer protein TrbD | - |
| BZY78_RS24685 () | 86787..87302 | + | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BZY78_RS24690 () | 87437..87658 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| BZY78_RS24695 () | 87818..90445 | + | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| BZY78_RS24700 () | 90442..90828 | + | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| BZY78_RS24705 () | 90825..91457 | + | 633 | WP_042047196.1 | type-F conjugative transfer system protein TraW | - |
| BZY78_RS24710 () | 91454..92446 | + | 993 | WP_042047198.1 | conjugal transfer pilus assembly protein TraU | - |
| BZY78_RS24715 () | 92455..93093 | + | 639 | WP_042047200.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BZY78_RS24720 () | 93090..94898 | + | 1809 | WP_047402305.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BZY78_RS24725 () | 94925..95182 | + | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| BZY78_RS24730 () | 95175..95918 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BZY78_RS24735 () | 95932..96273 | + | 342 | WP_047402303.1 | conjugal transfer protein TrbA | - |
| BZY78_RS24740 () | 96254..96589 | - | 336 | WP_000415571.1 | hypothetical protein | - |
| BZY78_RS24745 () | 96670..96954 | + | 285 | WP_000624105.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BZY78_RS24750 () | 96941..97495 | + | 555 | WP_047402299.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BZY78_RS24755 () | 97425..97799 | + | 375 | WP_071788165.1 | P-type conjugative transfer protein TrbJ | - |
| BZY78_RS24760 () | 97753..98145 | + | 393 | WP_047402297.1 | F-type conjugal transfer protein TrbF | - |
| BZY78_RS24765 () | 98132..99505 | + | 1374 | WP_113444820.1 | conjugal transfer protein TraH | - |
| BZY78_RS24770 () | 99502..102327 | + | 2826 | WP_087548944.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BZY78_RS24775 () | 102324..102833 | + | 510 | WP_000628100.1 | conjugal transfer entry exclusion protein TraS | - |
| BZY78_RS24780 () | 102847..103578 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| BZY78_RS24785 () | 103830..105983 | + | 2154 | WP_061341537.1 | type IV conjugative transfer system coupling protein TraD | - |
| BZY78_RS24790 () | 105983..111253 | + | 5271 | WP_047402288.1 | Multifunctional conjugation protein TraI | Relaxase |
| BZY78_RS24795 () | 111273..112016 | + | 744 | WP_033812872.1 | conjugal transfer pilus acetylase TraX | - |
| BZY78_RS24800 () | 112071..112631 | + | 561 | WP_087548945.1 | fertility inhibition protein FinO | - |
| BZY78_RS25750 () | 112762..112902 | + | 141 | WP_170921528.1 | hypothetical protein | - |
| BZY78_RS24805 () | 113102..113563 | + | 462 | WP_001233868.1 | thermonuclease family protein | - |
| BZY78_RS24810 () | 113609..113818 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| BZY78_RS24815 () | 113856..114446 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| BZY78_RS24820 () | 114686..114940 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| BZY78_RS24830 () | 115178..115252 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| BZY78_RS24835 () | 115245..116102 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| BZY78_RS24850 () | 117067..117318 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BZY78_RS24855 () | 117315..117602 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BZY78_RS24870 () | 121046..124948 | + | 3903 | WP_001045657.1 | Serine protease EspP | VF |
| BZY78_RS24875 () | 125258..125560 | + | 303 | Protein_134 | IS3 family transposase ISEc31 | Transposase |
| BZY78_RS24880 () | 125573..126724 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| BZY78_RS24885 () | 126792..127049 | - | 258 | Protein_136 | IS3 family transposase IS911 | Transposase |
| BZY78_RS25610 () | 127145..127360 | + | 216 | Protein_137 | helix-turn-helix transcriptional regulator | - |
| BZY78_RS25615 () | 127328..127522 | - | 195 | Protein_138 | IS91 family transposase | - |
| BZY78_RS24895 () | 127690..131823 | + | 4134 | WP_087548948.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| BZY78_RS24900 () | 131932..132383 | + | 452 | Protein_140 | peptide deformylase | - |
| BZY78_RS24905 () | 132370..132636 | - | 267 | Protein_141 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BZY78_RS24910 () | 132676..133763 | - | 1088 | Protein_142 | IS66 family transposase ISEc8 | Transposase |
| BZY78_RS24915 () | 133798..134529 | - | 732 | Protein_143 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| BZY78_RS24920 () | 134593..135375 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| BZY78_RS24925 () | 135372..136394 | - | 1023 | WP_042048531.1 | IS21 family transposase IS100kyp | Transposase |
| BZY78_RS24930 () | 136480..138723 | - | 2244 | Protein_146 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| BZY78_RS24935 () | 138704..139327 | - | 624 | WP_000904945.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| BZY78_RS24940 () | 139449..139760 | + | 312 | Protein_148 | IS66 family insertion sequence element accessory protein TnpB | - |
| BZY78_RS24945 () | 139780..141351 | + | 1572 | WP_087548950.1 | IS66 family transposase ISCro1 | Transposase |
| BZY78_RS24950 () | 141437..142011 | + | 575 | Protein_150 | hypothetical protein | - |
| BZY78_RS24955 () | 142029..142376 | - | 348 | WP_087548951.1 | hypothetical protein | - |
| BZY78_RS24960 () | 142489..143475 | + | 987 | Protein_152 | Outer membrane usher protein YehB | VF |
| BZY78_RS24965 () | 143491..144546 | + | 1056 | Protein_153 | fimbrial protein | - |
| BZY78_RS24975 () | 144599..145303 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BZY78_RS24980 () | 145579..146523 | - | 945 | Protein_155 | IS110 family transposase IS5708 | Transposase |
| BZY78_RS24990 () | 146591..147295 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BZY78_RS25000 () | 147551..147904 | + | 354 | Protein_157 | RNA 3'-terminal phosphate cyclase | - |
| BZY78_RS25005 () | 147947..148528 | - | 582 | Protein_158 | HTH-type transcriptional regulator MalT | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|