MGE detailed information
MGE type: Genomic_island MGE length: 21202 bp
Accession: NZ_CP019399 Location: 2420193..2441394 Organism: Pseudomonas chlororaphis strain R47 Replicon: chromosome
Accession: NZ_CP019399 Location: 2420193..2441394 Organism: Pseudomonas chlororaphis strain R47 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PchlR47_RS10905 () | 2415565..2416578 | + | 1014 | WP_124302308.1 | AraC family transcriptional regulator | - |
| PchlR47_RS10910 () | 2416602..2417231 | - | 630 | WP_038631322.1 | HAD family phosphatase | - |
| PchlR47_RS10915 () | 2417381..2417995 | - | 615 | WP_110177251.1 | hypothetical protein | - |
| PchlR47_RS10920 () | 2418297..2420069 | - | 1773 | WP_016704865.1 | acyl-CoA dehydrogenase C-terminal domain-containing protein | - |
| PchlR47_RS10925 () | 2420193..2421815 | - | 1623 | WP_038580397.1 | acyl-CoA synthetase | - |
| PchlR47_RS10930 () | 2421998..2423887 | + | 1890 | WP_124301292.1 | PAS domain S-box protein | - |
| PchlR47_RS10935 () | 2423884..2424519 | + | 636 | WP_124301293.1 | Response regulator protein TodT | VF |
| PchlR47_RS10940 () | 2424613..2425377 | + | 765 | WP_051423542.1 | hypothetical protein | - |
| PchlR47_RS10945 () | 2426123..2426524 | - | 402 | WP_092418556.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PchlR47_RS10950 () | 2426560..2426742 | - | 183 | WP_124301294.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PchlR47_RS10955 () | 2427107..2427388 | - | 282 | WP_053268620.1 | hypothetical protein | - |
| PchlR47_RS10960 () | 2428314..2428601 | + | 288 | WP_124314865.1 | hypothetical protein | - |
| PchlR47_RS10965 () | 2428646..2429776 | + | 1131 | WP_124301296.1 | hypothetical protein | - |
| PchlR47_RS10970 () | 2429994..2431316 | - | 1323 | WP_124301297.1 | hypothetical protein | - |
| PchlR47_RS10975 () | 2431533..2432381 | - | 849 | WP_124303534.1 | DUF2726 domain-containing protein | - |
| PchlR47_RS10980 () | 2432723..2433271 | - | 549 | WP_124301299.1 | hypothetical protein | - |
| PchlR47_RS10985 () | 2433631..2434284 | + | 654 | WP_009048161.1 | peroxiredoxin | - |
| PchlR47_RS10990 () | 2434349..2434546 | - | 198 | WP_124301300.1 | hypothetical protein | - |
| PchlR47_RS10995 () | 2434757..2435308 | + | 552 | WP_038631355.1 | GNAT family N-acetyltransferase | - |
| PchlR47_RS11000 () | 2435369..2436079 | - | 711 | WP_009048163.1 | aquaporin family protein | - |
| PchlR47_RS11005 () | 2436147..2437202 | - | 1056 | WP_124301301.1 | methyltransferase domain-containing protein | - |
| PchlR47_RS11010 () | 2437219..2438121 | - | 903 | WP_124301302.1 | methyltransferase type 11 | - |
| PchlR47_RS11015 () | 2438133..2439407 | - | 1275 | WP_029527356.1 | radical SAM protein | - |
| PchlR47_RS11020 () | 2439492..2440697 | - | 1206 | WP_124301303.1 | permease | - |
| PchlR47_RS11025 () | 2440897..2441394 | + | 498 | WP_009048168.1 | MarR family transcriptional regulator | - |
| PchlR47_RS11030 () | 2441592..2442260 | + | 669 | WP_053268631.1 | ABC transporter ATP-binding protein | - |
| PchlR47_RS11035 () | 2442262..2444742 | + | 2481 | WP_124302309.1 | FtsX-like permease family protein | - |
| PchlR47_RS11040 () | 2444732..2445820 | + | 1089 | WP_124301304.1 | iron ABC transporter permease | - |
| PchlR47_RS32485 () | 2446024..2446161 | + | 138 | WP_016705072.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|