MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP019243 Location: 4181696..4202377 Organism: Escherichia coli strain Combat2C1 Replicon: chromosome
Accession: NZ_CP019243 Location: 4181696..4202377 Organism: Escherichia coli strain Combat2C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI82_RS21335 () | 4177811..4178236 | - | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
| BWI82_RS21340 () | 4178241..4179725 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| BWI82_RS21345 () | 4179748..4180251 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| BWI82_RS21350 () | 4180957..4181475 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| BWI82_RS21355 () | 4181696..4183678 | + | 1983 | WP_000053624.1 | Actin cross-linking toxin VgrG1 | VF |
| BWI82_RS21360 () | 4183785..4184831 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| BWI82_RS21365 () | 4184824..4186263 | + | 1440 | WP_148116735.1 | DUF4150 domain-containing protein | - |
| BWI82_RS21370 () | 4186238..4186528 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| BWI82_RS21375 () | 4186786..4187550 | + | 765 | Protein_3911 | ISAs1 family transposase | - |
| BWI82_RS21380 () | 4187779..4188282 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| BWI82_RS21385 () | 4188376..4188864 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| BWI82_RS21390 () | 4188890..4189084 | + | 195 | Protein_3914 | ISAs1 family transposase | - |
| BWI82_RS21395 () | 4189135..4189905 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| BWI82_RS21400 () | 4190086..4190532 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| BWI82_RS21405 () | 4190575..4193019 | - | 2445 | WP_000973131.1 | Acyl-coenzyme A dehydrogenase | VF |
| BWI82_RS21410 () | 4193259..4193837 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| BWI82_RS21415 () | 4194042..4194809 | + | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| BWI82_RS21420 () | 4194780..4195520 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| BWI82_RS21425 () | 4195832..4196581 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| BWI82_RS21430 () | 4196757..4197254 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| BWI82_RS21435 () | 4197574..4199286 | - | 1713 | Protein_3923 | Flagellar biosynthesis protein FlhA | VF |
| BWI82_RS21440 () | 4199258..4200043 | + | 786 | WP_000207578.1 | Chemotaxis protein LafU | VF |
| BWI82_RS21445 () | 4200114..4201169 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| BWI82_RS21450 () | 4201221..4201514 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| BWI82_RS21455 () | 4201517..4201915 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| BWI82_RS21460 () | 4201925..4202377 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| BWI82_RS21465 () | 4202567..4203706 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| BWI82_RS21470 () | 4203703..4204317 | + | 615 | WP_000602124.1 | peptide chain release factor H | - |
| BWI82_RS21475 () | 4204374..4205831 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| BWI82_RS21480 () | 4206092..4206550 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - () | 4207146..4207226 | + | 81 | NuclAT_4 | - | - |
| - () | 4207146..4207226 | + | 81 | NuclAT_4 | - | - |
| - () | 4207146..4207226 | + | 81 | NuclAT_4 | - | - |
| - () | 4207146..4207226 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|