MGE detailed information
MGE type: Genomic_island MGE length: 67159 bp
Accession: NZ_CP019051 Location: 2218887..2286045 Organism: Escherichia coli strain CRE1540 Replicon: chromosome
Accession: NZ_CP019051 Location: 2218887..2286045 Organism: Escherichia coli strain CRE1540 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVL39_RS11325 () | 2213929..2214492 | + | 564 | WP_001115137.1 | type II secretion system minor pseudopilin GspH | - |
| BVL39_RS11330 () | 2214489..2214860 | + | 372 | WP_000820098.1 | type II secretion system minor pseudopilin GspI | - |
| BVL39_RS11335 () | 2214857..2215456 | + | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| BVL39_RS11340 () | 2215459..2216436 | + | 978 | WP_000633222.1 | type II secretion system minor pseudopilin GspK | - |
| BVL39_RS11345 () | 2216433..2217611 | + | 1179 | WP_000094974.1 | type II secretion system protein GspL | - |
| BVL39_RS11350 () | 2217613..2218149 | + | 537 | WP_000942786.1 | GspM family type II secretion system protein YghD | - |
| BVL39_RS11360 () | 2218564..2218890 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BVL39_RS11365 () | 2218887..2219150 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| BVL39_RS11370 () | 2219222..2220088 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| BVL39_RS11375 () | 2220173..2220370 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| BVL39_RS11380 () | 2220382..2220873 | - | 492 | WP_023155722.1 | hypothetical protein | - |
| BVL39_RS11385 () | 2220870..2221247 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| BVL39_RS11390 () | 2221294..2221668 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| BVL39_RS11395 () | 2221748..2221969 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| BVL39_RS11400 () | 2222038..2222514 | - | 477 | WP_001186715.1 | RadC family protein | - |
| BVL39_RS11410 () | 2222530..2223015 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| BVL39_RS11415 () | 2223107..2223925 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| BVL39_RS11420 () | 2224016..2224225 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| BVL39_RS11425 () | 2224255..2224932 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| BVL39_RS11430 () | 2225051..2225935 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| BVL39_RS11435 () | 2226042..2226974 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| BVL39_RS11440 () | 2226971..2227780 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| BVL39_RS11455 () | 2229531..2230262 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| BVL39_RS11460 () | 2230356..2231013 | - | 658 | Protein_2055 | transposase | - |
| BVL39_RS11465 () | 2231447..2233051 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| BVL39_RS11470 () | 2234648..2235214 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| BVL39_RS29190 () | 2235334..2235483 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| BVL39_RS28870 () | 2235498..2236070 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| BVL39_RS11480 () | 2236139..2236375 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| BVL39_RS11490 () | 2236644..2237192 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| BVL39_RS11495 () | 2237211..2237459 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| BVL39_RS11500 () | 2237528..2237719 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| BVL39_RS11510 () | 2238122..2238813 | - | 692 | Protein_2064 | IS1 family transposase | - |
| BVL39_RS11515 () | 2238873..2239049 | + | 177 | Protein_2065 | transketolase family protein | - |
| BVL39_RS11520 () | 2239312..2239425 | + | 114 | WP_131501864.1 | transposase | - |
| BVL39_RS11530 () | 2240276..2240842 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| BVL39_RS11540 () | 2241083..2241898 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| BVL39_RS11545 () | 2241959..2242762 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| BVL39_RS11550 () | 2242762..2243598 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| BVL39_RS11560 () | 2243904..2244146 | + | 243 | WP_000844627.1 | transposase | - |
| BVL39_RS11565 () | 2244178..2244828 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BVL39_RS11570 () | 2244934..2246133 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| BVL39_RS11575 () | 2246100..2246288 | - | 189 | Protein_2074 | IS91 family transposase | - |
| BVL39_RS11580 () | 2246400..2246705 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| BVL39_RS11585 () | 2246733..2247947 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| BVL39_RS29195 () | 2248164..2248610 | - | 447 | Protein_2077 | DUF3363 domain-containing protein | - |
| BVL39_RS11595 () | 2249079..2249735 | - | 657 | Protein_2078 | IS91-like element ISVsa3 family transposase | - |
| BVL39_RS11600 () | 2249669..2249947 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| BVL39_RS11615 () | 2250370..2250684 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| BVL39_RS11620 () | 2250891..2251154 | + | 264 | Protein_2081 | Pap fimbrial major pilin protein | VF |
| BVL39_RS11630 () | 2251605..2252837 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| BVL39_RS11635 () | 2252988..2254149 | - | 1162 | Protein_2083 | IS3 family transposase IS3 | Transposase |
| BVL39_RS11640 () | 2254317..2255297 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| BVL39_RS11645 () | 2255294..2256238 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| BVL39_RS11650 () | 2256241..2257323 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| BVL39_RS11660 () | 2257790..2258056 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| BVL39_RS11665 () | 2258356..2258870 | - | 515 | Protein_2088 | ISL3 family transposase ISEc38 | Transposase |
| BVL39_RS11675 () | 2259478..2262891 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| BVL39_RS11680 () | 2262955..2264589 | + | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| BVL39_RS11685 () | 2264586..2265728 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| BVL39_RS11690 () | 2265737..2267359 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| BVL39_RS11695 () | 2267359..2268255 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| BVL39_RS11700 () | 2268478..2268707 | - | 230 | Protein_2094 | integrase | - |
| BVL39_RS11705 () | 2268886..2269623 | + | 738 | WP_001398114.1 | porin family protein | - |
| BVL39_RS11710 () | 2270043..2270939 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| BVL39_RS11715 () | 2270988..2272067 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| BVL39_RS11720 () | 2272114..2273685 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| BVL39_RS11725 () | 2273682..2273948 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| BVL39_RS11730 () | 2274088..2274285 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| BVL39_RS11740 () | 2274338..2276011 | + | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| BVL39_RS11745 () | 2276155..2277189 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| BVL39_RS11755 () | 2277239..2277600 | + | 362 | Protein_2103 | IS1 family transposase IS1A | Transposase |
| BVL39_RS29200 () | 2277589..2277876 | + | 288 | Protein_2104 | integrase core domain-containing protein | - |
| BVL39_RS11765 () | 2278454..2279848 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| BVL39_RS11770 () | 2280043..2281476 | - | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| BVL39_RS11775 () | 2281473..2282750 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| BVL39_RS11780 () | 2282813..2284939 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| BVL39_RS11785 () | 2285035..2286045 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| BVL39_RS11790 () | 2286195..2287379 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| BVL39_RS11800 () | 2287737..2288444 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| BVL39_RS29435 () | 2288597..2288680 | + | 84 | WP_211180506.1 | protein YqgH | - |
| BVL39_RS11810 () | 2288842..2290977 | + | 2136 | WP_000839745.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|