MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 49090 bp
Accession: NZ_CP018965 Location: 2186326..2235415 Organism: Escherichia coli strain Ecol_517 Replicon: chromosome
Accession: NZ_CP018965 Location: 2186326..2235415 Organism: Escherichia coli strain Ecol_517 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE959_RS12340 () | 2181879..2182643 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| BE959_RS12345 () | 2182894..2184393 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| BE959_RS12350 () | 2184393..2185445 | + | 1053 | WP_000943057.1 | glycolate oxidase subunit GlcE | - |
| BE959_RS12355 () | 2185456..2186679 | + | 1224 | WP_001194666.1 | glycolate oxidase subunit GlcF | - |
| BE959_RS12360 () | 2186684..2187088 | + | 405 | WP_000853256.1 | protein GlcG | - |
| BE959_RS12365 () | 2187110..2189281 | + | 2172 | WP_000084077.1 | malate synthase G | - |
| BE959_RS12370 () | 2189637..2191319 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| BE959_RS12380 () | 2191805..2192350 | + | 546 | Protein_2019 | Accessory colonization factor AcfD | - |
| BE959_RS12385 () | 2192350..2192553 | + | 204 | Protein_2020 | type II secretion system protein GspJ | - |
| BE959_RS12390 () | 2192556..2193533 | + | 978 | WP_000633220.1 | Putative type II secretion system protein K | VF |
| BE959_RS12395 () | 2193530..2194708 | + | 1179 | WP_000094970.1 | Type II secretion system protein L | VF |
| BE959_RS12400 () | 2194710..2195246 | + | 537 | WP_000942786.1 | Type II secretion system protein M | VF |
| BE959_RS12405 () | 2195661..2195987 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BE959_RS12410 () | 2195984..2196247 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| BE959_RS12415 () | 2196319..2197185 | - | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| BE959_RS12420 () | 2197270..2197467 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| BE959_RS12425 () | 2197479..2197967 | - | 489 | WP_000761676.1 | hypothetical protein | - |
| BE959_RS12430 () | 2197964..2198341 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| BE959_RS12435 () | 2198388..2198762 | - | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BE959_RS12440 () | 2198842..2199063 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| BE959_RS12445 () | 2199126..2199602 | - | 477 | WP_001366855.1 | RadC family protein | - |
| BE959_RS12450 () | 2199618..2200097 | - | 480 | WP_000844100.1 | antirestriction protein | - |
| BE959_RS12455 () | 2200179..2200997 | - | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| BE959_RS12460 () | 2201087..2201320 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| BE959_RS12465 () | 2201326..2202003 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| BE959_RS12470 () | 2202151..2202831 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| BE959_RS12475 () | 2203034..2203918 | - | 885 | WP_000010402.1 | 50S ribosome-binding GTPase | - |
| BE959_RS12480 () | 2204103..2205233 | + | 1131 | WP_000147745.1 | hypothetical protein | - |
| BE959_RS12500 () | 2206752..2207483 | + | 732 | WP_001075482.1 | inovirus Gp2 family protein | - |
| BE959_RS12510 () | 2207907..2208611 | - | 705 | WP_001389195.1 | toll/interleukin-1 receptor domain-containing protein | - |
| BE959_RS12515 () | 2210189..2210755 | + | 567 | WP_001126801.1 | inovirus-type Gp2 protein | - |
| BE959_RS12520 () | 2211013..2211573 | + | 561 | WP_000991581.1 | hypothetical protein | - |
| BE959_RS12525 () | 2211642..2211872 | + | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| BE959_RS12535 () | 2212140..2212640 | + | 501 | WP_001167446.1 | hypothetical protein | - |
| BE959_RS12540 () | 2212729..2212914 | + | 186 | WP_001389193.1 | hypothetical protein | - |
| BE959_RS12545 () | 2212892..2214571 | + | 1680 | Protein_2047 | hypothetical protein | VF |
| BE959_RS12550 () | 2214535..2215380 | + | 846 | WP_000439135.1 | hypothetical protein | VF |
| BE959_RS12555 () | 2215340..2216214 | - | 875 | Protein_2049 | IS66 family transposase ISEc49 | Transposase |
| BE959_RS12560 () | 2216221..2216613 | - | 393 | WP_000950652.1 | IS66 family transposase ISEc49 | Transposase |
| BE959_RS12565 () | 2216600..2216929 | - | 330 | WP_000042910.1 | IS66 family transposase ISEc49 | Transposase |
| BE959_RS12570 () | 2217059..2217731 | + | 673 | Protein_2052 | IS3 family transposase ISEc48 | Transposase |
| BE959_RS26075 () | 2217768..2217923 | - | 156 | Protein_2053 | integrase | - |
| BE959_RS12580 () | 2218131..2223089 | + | 4959 | WP_000877066.1 | NERD domain-containing protein | - |
| BE959_RS12585 () | 2223089..2224636 | + | 1548 | WP_001294844.1 | hypothetical protein | - |
| BE959_RS26080 () | 2224851..2226041 | + | 1191 | Protein_2056 | IS3 family transposase | - |
| BE959_RS12610 () | 2226188..2226484 | - | 297 | Protein_2057 | transposase | - |
| BE959_RS26545 () | 2226464..2226562 | - | 99 | WP_000745631.1 | IS3 family transposase ISRaq1 | Transposase |
| BE959_RS26550 () | 2226645..2226747 | + | 103 | Protein_2059 | integrase | - |
| BE959_RS12620 () | 2227002..2227931 | + | 930 | WP_001328257.1 | DNA (cytosine-5-)-methyltransferase | - |
| BE959_RS12625 () | 2227912..2228868 | - | 957 | WP_000301136.1 | hypothetical protein | - |
| BE959_RS12630 () | 2229127..2230355 | + | 1229 | WP_166426901.1 | IS3 family transposase IS2 | Transposase |
| BE959_RS12640 () | 2230612..2231031 | + | 420 | WP_000422706.1 | IS66 family transposase ISEc23 | Transposase |
| BE959_RS12645 () | 2231028..2231378 | + | 351 | WP_000624710.1 | IS66 family transposase ISEc47 | Transposase |
| BE959_RS12650 () | 2231409..2232170 | + | 762 | Protein_2065 | IS66 family transposase ISEc23 | Transposase |
| BE959_RS12655 () | 2232399..2233631 | - | 1233 | WP_001389184.1 | MFS transporter | - |
| BE959_RS12660 () | 2233646..2234023 | - | 378 | WP_001389183.1 | RidA family protein | - |
| BE959_RS12665 () | 2234045..2235004 | - | 960 | WP_000765976.1 | sugar phosphate isomerase/epimerase | - |
| BE959_RS12670 () | 2235190..2235852 | + | 663 | WP_000836532.1 | PAS domain-containing protein | - |
| BE959_RS26380 () | 2235964..2236065 | - | 102 | Protein_2070 | transposase domain-containing protein | - |
| BE959_RS12685 () | 2236785..2237705 | + | 921 | WP_000107666.1 | aminoimidazole riboside kinase | - |
| BE959_RS12690 () | 2237873..2239390 | + | 1518 | WP_000277208.1 | carbohydrate porin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|