MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94139 bp
Accession: NZ_CP018852 Location: 1..94139 Organism: Xanthomonas citri pv. citri strain LJ207-7 Replicon: plasmid pLJ207-7.2
Accession: NZ_CP018852 Location: 1..94139 Organism: Xanthomonas citri pv. citri strain LJ207-7 Replicon: plasmid pLJ207-7.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI315_RS24400 () | 137..409 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| BI315_RS24405 () | 700..1050 | + | 351 | WP_015462612.1 | hypothetical protein | - |
| BI315_RS26690 () | 1249..1590 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| BI315_RS24415 () | 1849..3423 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| BI315_RS24420 () | 3437..6412 | + | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| BI315_RS24425 () | 6466..6792 | - | 327 | WP_173667216.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BI315_RS24430 () | 6789..7007 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| BI315_RS24435 () | 7144..7530 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| BI315_RS24440 () | 7607..8026 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| BI315_RS24445 () | 8152..9030 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| BI315_RS24450 () | 9041..10063 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| BI315_RS24455 () | 10074..11294 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| BI315_RS24460 () | 11296..12078 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| BI315_RS24465 () | 12103..12777 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| BI315_RS24470 () | 12774..13640 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| BI315_RS24475 () | 13642..14022 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| BI315_RS24480 () | 14015..14227 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| BI315_RS24485 () | 14275..14943 | - | 669 | WP_040156235.1 | hypothetical protein | - |
| BI315_RS24490 () | 14940..17573 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| BI315_RS24495 () | 17596..17895 | - | 300 | WP_040156233.1 | VirB3 family type IV secretion system protein | - |
| BI315_RS24500 () | 17892..18269 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| BI315_RS24505 () | 18290..18580 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| BI315_RS26595 () | 18893..19108 | + | 216 | WP_155400515.1 | hypothetical protein | - |
| BI315_RS25545 () | 19273..20359 | - | 1087 | Protein_23 | IS3 family transposase ISXac2 | Transposase |
| BI315_RS24530 () | 20474..20710 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| BI315_RS24535 () | 20714..21043 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| BI315_RS24540 () | 21095..22126 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| BI315_RS24545 () | 22140..22907 | - | 768 | WP_011052998.1 | ParA family protein | - |
| BI315_RS24555 () | 23711..24937 | - | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| BI315_RS24560 () | 25217..26404 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| BI315_RS24565 () | 26411..26674 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| BI315_RS24570 () | 26699..27100 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BI315_RS24575 () | 27097..27357 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BI315_RS24580 () | 27548..28120 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| BI315_RS24585 () | 28227..29150 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| BI315_RS24590 () | 29364..29603 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| BI315_RS24595 () | 29603..30022 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BI315_RS24600 () | 30027..33002 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BI315_RS26295 () | 33021..33203 | + | 183 | Protein_38 | UPF0149 family protein | - |
| BI315_RS24615 () | 33277..34491 | + | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| BI315_RS24620 () | 34510..35079 | + | 570 | Protein_40 | UPF0149 family protein | - |
| BI315_RS24625 () | 35124..35330 | + | 207 | Protein_41 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| BI315_RS24630 () | 35497..35801 | - | 305 | Protein_42 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| BI315_RS24635 () | 35785..36387 | - | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| BI315_RS24640 () | 36593..36850 | + | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| BI315_RS24645 () | 36850..37182 | + | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BI315_RS26300 () | 37205..37456 | + | 252 | WP_125459571.1 | hypothetical protein | - |
| BI315_RS24650 () | 37453..37665 | + | 213 | WP_011052947.1 | hypothetical protein | - |
| BI315_RS24655 () | 37655..38191 | + | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| BI315_RS26600 () | 38481..38702 | + | 222 | WP_011052944.1 | hypothetical protein | - |
| BI315_RS24670 () | 38948..42532 | + | 3585 | WP_075155153.1 | TAL effector repeat-containing protein | - |
| BI315_RS24675 () | 42631..42777 | - | 147 | Protein_51 | transposase | - |
| BI315_RS24680 () | 42822..43520 | - | 699 | WP_058958626.1 | UPF0149 family protein | - |
| BI315_RS24685 () | 43539..46514 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BI315_RS24690 () | 46519..46938 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BI315_RS24695 () | 46938..47177 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| BI315_RS24700 () | 47391..48314 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| BI315_RS24705 () | 48358..48540 | + | 183 | Protein_57 | helix-turn-helix domain-containing protein | - |
| BI315_RS24710 () | 48671..49087 | - | 417 | WP_087962480.1 | transposase | - |
| BI315_RS26310 () | 49141..49347 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| BI315_RS24715 () | 49397..49726 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| BI315_RS24720 () | 49873..50472 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| BI315_RS24725 () | 50799..51248 | + | 450 | WP_015462602.1 | hypothetical protein | - |
| BI315_RS24730 () | 51245..51850 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| BI315_RS24735 () | 51847..52389 | + | 543 | WP_011052965.1 | hypothetical protein | - |
| BI315_RS24740 () | 52469..52813 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| BI315_RS24745 () | 52856..54133 | - | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| BI315_RS24750 () | 54266..57256 | - | 2991 | WP_011052967.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| BI315_RS24755 () | 57264..58538 | - | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| BI315_RS24760 () | 58730..59785 | + | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| BI315_RS24765 () | 59918..60994 | + | 1077 | WP_040107542.1 | hypothetical protein | - |
| BI315_RS24780 () | 62353..65643 | + | 3291 | WP_075155154.1 | TAL effector repeat-containing protein | - |
| BI315_RS24785 () | 66009..67229 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| BI315_RS24790 () | 67477..67791 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| BI315_RS24795 () | 67936..68259 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| BI315_RS24800 () | 68256..68882 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| BI315_RS24805 () | 69338..69646 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| BI315_RS24810 () | 69643..69852 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| BI315_RS24815 () | 70247..70600 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| BI315_RS24820 () | 70649..71358 | - | 710 | Protein_79 | plasmid stabilization protein | - |
| BI315_RS24825 () | 71355..71801 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| BI315_RS24830 () | 72149..72544 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| BI315_RS26605 () | 72544..72717 | + | 174 | WP_011052974.1 | hypothetical protein | - |
| BI315_RS24835 () | 72859..73131 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| BI315_RS24840 () | 73244..73489 | + | 246 | Protein_84 | IS3 family transposase | - |
| BI315_RS24845 () | 73548..73925 | + | 378 | WP_004666662.1 | hypothetical protein | - |
| BI315_RS24850 () | 74086..74481 | - | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| BI315_RS24855 () | 74478..74729 | - | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| BI315_RS24860 () | 74909..75538 | + | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| BI315_RS26610 () | 76640..76804 | - | 165 | WP_155400514.1 | hypothetical protein | - |
| BI315_RS24885 () | 77444..78265 | + | 822 | WP_011052929.1 | hypothetical protein | - |
| BI315_RS24890 () | 78900..79649 | + | 750 | WP_125460140.1 | DNA-binding protein | - |
| BI315_RS24895 () | 79725..80354 | + | 630 | WP_015463817.1 | AAA family ATPase | - |
| BI315_RS24900 () | 80351..80587 | + | 237 | WP_015463816.1 | hypothetical protein | - |
| BI315_RS24920 () | 83612..87061 | + | 3450 | WP_075155156.1 | TAL effector repeat-containing protein | - |
| BI315_RS24925 () | 87427..88647 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| BI315_RS24930 () | 88895..89209 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| BI315_RS24935 () | 89354..89677 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| BI315_RS24940 () | 89674..90300 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| BI315_RS24945 () | 90756..91064 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| BI315_RS24950 () | 91061..91270 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| BI315_RS24955 () | 91665..92018 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| BI315_RS24960 () | 92067..92776 | - | 710 | Protein_103 | plasmid stabilization protein | - |
| BI315_RS24965 () | 92773..93219 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| BI315_RS24970 () | 93566..93961 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| BI315_RS26615 () | 93961..94134 | + | 174 | WP_011052974.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|