MGE detailed information
MGE type: Prophage MGE length: 53052 bp
Accession: NZ_CP017516 Location: 1924263..1977314 Organism: Mannheimia haemolytica strain 23217 Replicon: chromosome
Accession: NZ_CP017516 Location: 1924263..1977314 Organism: Mannheimia haemolytica strain 23217 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG560_RS09505 () | 1919296..1921455 | - | 2160 | WP_006249915.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| BG560_RS09510 () | 1921573..1922439 | + | 867 | WP_006252139.1 | ABC transporter substrate-binding protein | - |
| BG560_RS09515 () | 1922450..1923436 | + | 987 | WP_006252138.1 | iron ABC transporter permease | - |
| BG560_RS09520 () | 1923436..1924242 | + | 807 | WP_006249912.1 | ABC transporter ATP-binding protein | - |
| BG560_RS09525 () | 1924263..1924901 | - | 639 | WP_015587131.1 | phosphoribosylglycinamide formyltransferase | - |
| BG560_RS09530 () | 1925008..1927206 | - | 2199 | Protein_1836 | TonB-dependent receptor | - |
| BG560_RS09535 () | 1927260..1928096 | - | 837 | WP_006249910.1 | ChaN family lipoprotein | - |
| BG560_RS09545 () | 1928357..1929397 | + | 1041 | WP_020824074.1 | IS481 family transposase | - |
| BG560_RS09550 () | 1929470..1929769 | - | 300 | WP_006247810.1 | XRE family transcriptional regulator | - |
| BG560_RS09555 () | 1929741..1930130 | - | 390 | WP_006247811.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BG560_RS09560 () | 1930274..1930567 | + | 294 | WP_006247812.1 | hypothetical protein | - |
| BG560_RS09565 () | 1930837..1931877 | - | 1041 | WP_020824074.1 | IS481 family transposase | - |
| BG560_RS13270 () | 1931981..1932139 | - | 159 | WP_006247809.1 | hypothetical protein | - |
| BG560_RS09575 () | 1932149..1939282 | - | 7134 | WP_020824195.1 | DUF1983 domain-containing protein | - |
| BG560_RS09580 () | 1939285..1939875 | - | 591 | WP_020824196.1 | tail assembly protein | - |
| BG560_RS09585 () | 1940144..1940875 | - | 732 | WP_020824197.1 | C40 family peptidase | - |
| BG560_RS09590 () | 1940879..1941595 | - | 717 | WP_020824198.1 | phage minor tail protein L | - |
| BG560_RS09595 () | 1941595..1941924 | - | 330 | WP_020824199.1 | phage tail protein | - |
| BG560_RS09600 () | 1941924..1945475 | - | 3552 | WP_020824200.1 | phage tail tape measure protein | - |
| BG560_RS09605 () | 1945529..1945756 | - | 228 | WP_020824201.1 | hypothetical protein | - |
| BG560_RS09610 () | 1945819..1946049 | - | 231 | WP_006249183.1 | DUF4035 domain-containing protein | - |
| BG560_RS09615 () | 1946094..1946495 | - | 402 | WP_006249184.1 | hypothetical protein | - |
| BG560_RS09620 () | 1946579..1947220 | - | 642 | WP_006249185.1 | hypothetical protein | - |
| BG560_RS09625 () | 1947248..1947640 | - | 393 | WP_020824205.1 | phage tail protein | - |
| BG560_RS09630 () | 1947637..1948161 | - | 525 | WP_020824206.1 | phage tail protein | - |
| BG560_RS09635 () | 1948165..1948467 | - | 303 | WP_020824207.1 | phage tail protein | - |
| BG560_RS09640 () | 1948460..1948783 | - | 324 | WP_020824208.1 | DUF2190 family protein | - |
| BG560_RS13275 () | 1948796..1948957 | - | 162 | WP_158497199.1 | hypothetical protein | - |
| BG560_RS09645 () | 1949036..1950997 | - | 1962 | WP_020824209.1 | Clp protease ClpP | - |
| BG560_RS09650 () | 1951401..1952597 | - | 1197 | WP_020824210.1 | hypothetical protein | - |
| BG560_RS09655 () | 1952601..1954112 | - | 1512 | WP_020824211.1 | phage portal protein | - |
| BG560_RS09660 () | 1954112..1954336 | - | 225 | WP_015484701.1 | hypothetical protein | - |
| BG560_RS09665 () | 1954333..1956444 | - | 2112 | WP_020824212.1 | phage terminase large subunit family protein | - |
| BG560_RS09670 () | 1956444..1956923 | - | 480 | WP_020824213.1 | DUF1441 family protein | - |
| BG560_RS13280 () | 1957193..1957426 | - | 234 | WP_020824118.1 | hypothetical protein | - |
| BG560_RS09680 () | 1957392..1957721 | - | 330 | WP_020824214.1 | DUF2570 domain-containing protein | - |
| BG560_RS09685 () | 1957722..1958315 | - | 594 | WP_061888656.1 | glycoside hydrolase family 19 protein | - |
| BG560_RS09690 () | 1958305..1958658 | - | 354 | WP_020824216.1 | phage holin, lambda family | - |
| BG560_RS13285 () | 1958801..1958971 | - | 171 | WP_006250096.1 | hypothetical protein | - |
| BG560_RS09700 () | 1958997..1959182 | - | 186 | WP_006251707.1 | hypothetical protein | - |
| BG560_RS09710 () | 1959691..1959885 | + | 195 | WP_006251708.1 | hypothetical protein | - |
| BG560_RS09715 () | 1959853..1960293 | - | 441 | WP_006252752.1 | hypothetical protein | - |
| BG560_RS09720 () | 1960283..1960642 | - | 360 | WP_020824218.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BG560_RS09725 () | 1960635..1961663 | - | 1029 | WP_020824219.1 | DUF968 domain-containing protein | - |
| BG560_RS09730 () | 1961790..1962383 | - | 594 | WP_061888639.1 | adenine methyltransferase | - |
| BG560_RS09735 () | 1962394..1963440 | - | 1047 | WP_020824125.1 | conserved phage C-terminal domain-containing protein | - |
| BG560_RS09740 () | 1963437..1964276 | - | 840 | WP_006252350.1 | Rha family transcriptional regulator | - |
| BG560_RS09745 () | 1964452..1964712 | - | 261 | WP_006252483.1 | hypothetical protein | - |
| BG560_RS09750 () | 1964733..1964933 | - | 201 | WP_006248825.1 | helix-turn-helix domain-containing protein | - |
| BG560_RS09755 () | 1965064..1965747 | + | 684 | WP_006252485.1 | helix-turn-helix transcriptional regulator | - |
| BG560_RS09760 () | 1965822..1966202 | + | 381 | WP_006248823.1 | hypothetical protein | - |
| BG560_RS09765 () | 1966207..1966692 | + | 486 | WP_006252741.1 | hypothetical protein | - |
| BG560_RS09770 () | 1966823..1967005 | + | 183 | WP_006250075.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BG560_RS09775 () | 1967044..1967463 | + | 420 | WP_006250984.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BG560_RS09780 () | 1967530..1967835 | - | 306 | WP_006250985.1 | HigA family addiction module antidote protein | - |
| BG560_RS09785 () | 1967844..1968119 | - | 276 | WP_006250986.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BG560_RS09790 () | 1968409..1968639 | + | 231 | WP_006250987.1 | hypothetical protein | - |
| BG560_RS09795 () | 1969118..1969441 | - | 324 | WP_006250988.1 | hypothetical protein | - |
| BG560_RS09800 () | 1969634..1969819 | + | 186 | WP_020824222.1 | hypothetical protein | - |
| BG560_RS13290 () | 1969803..1969967 | + | 165 | WP_020824223.1 | hypothetical protein | - |
| BG560_RS09805 () | 1969973..1970431 | + | 459 | WP_006253113.1 | single-stranded DNA-binding protein | - |
| BG560_RS09810 () | 1970467..1970826 | + | 360 | WP_006250991.1 | hypothetical protein | - |
| BG560_RS09815 () | 1970898..1971701 | + | 804 | WP_020824224.1 | DUF2303 family protein | - |
| BG560_RS09820 () | 1971795..1972229 | + | 435 | WP_020824225.1 | hypothetical protein | - |
| BG560_RS09825 () | 1972239..1972727 | + | 489 | WP_020824226.1 | DUF551 domain-containing protein | - |
| BG560_RS09830 () | 1972748..1972957 | + | 210 | WP_020824227.1 | hypothetical protein | - |
| BG560_RS09835 () | 1973104..1973229 | + | 126 | WP_006248807.1 | Com family DNA-binding transcriptional regulator | - |
| BG560_RS09840 () | 1973276..1974118 | + | 843 | WP_020824228.1 | hypothetical protein | - |
| BG560_RS09845 () | 1974181..1974564 | + | 384 | WP_020824134.1 | hypothetical protein | - |
| BG560_RS09850 () | 1974614..1974889 | + | 276 | WP_020824229.1 | DUF4224 domain-containing protein | - |
| BG560_RS09855 () | 1974849..1975904 | + | 1056 | WP_006251368.1 | tyrosine-type recombinase/integrase | - |
| BG560_RS09860 () | 1976052..1977314 | - | 1263 | WP_006249908.1 | serine hydroxymethyltransferase | - |
| BG560_RS09865 () | 1977590..1977811 | - | 222 | WP_006249906.1 | hypothetical protein | - |
| BG560_RS09870 () | 1977899..1978930 | - | 1032 | WP_006252134.1 | methionine synthase | - |
| BG560_RS09875 () | 1979018..1979995 | - | 978 | WP_006252133.1 | DUF1852 family protein | - |
| BG560_RS09880 () | 1980134..1981018 | - | 885 | WP_006252132.1 | NAD(+) kinase | - |
| BG560_RS09885 () | 1981028..1982062 | - | 1035 | WP_006252131.1 | rRNA methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|