MGE detailed information
MGE type: Prophage MGE length: 78127 bp
Accession: NZ_CP017490 Location: 1893263..1971389 Organism: Mannheimia haemolytica strain 39107 Replicon: chromosome
Accession: NZ_CP017490 Location: 1893263..1971389 Organism: Mannheimia haemolytica strain 39107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG549_RS09310 () | 1888583..1889167 | + | 585 | WP_006252152.1 | LPS export ABC transporter periplasmic protein LptC | - |
| BG549_RS09315 () | 1889191..1889697 | + | 507 | WP_006252151.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| BG549_RS09320 () | 1889709..1890434 | + | 726 | WP_006249940.1 | LPS export ABC transporter ATP-binding protein | - |
| BG549_RS09325 () | 1890476..1890988 | + | 513 | WP_006249939.1 | PTS sugar transporter subunit IIA | - |
| BG549_RS09330 () | 1891001..1891864 | + | 864 | WP_006252150.1 | RNase adapter RapZ | - |
| BG549_RS09335 () | 1891947..1893131 | + | 1185 | WP_006249937.1 | FAD-dependent monooxygenase | - |
| BG549_RS09340 () | 1893263..1893847 | + | 585 | WP_006249936.1 | hypothetical protein | - |
| BG549_RS09345 () | 1893914..1894528 | + | 615 | WP_115359522.1 | lipoprotein Hlp | - |
| BG549_RS09350 () | 1894608..1895543 | - | 936 | WP_006249934.1 | permease-like cell division protein FtsX | - |
| BG549_RS09355 () | 1895553..1896206 | - | 654 | WP_006249933.1 | Cell division ATP-binding protein FtsE | VF |
| BG549_RS09360 () | 1896199..1897695 | - | 1497 | WP_006249932.1 | signal recognition particle-docking protein FtsY | - |
| BG549_RS09365 () | 1897774..1898364 | + | 591 | WP_006249931.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BG549_RS09370 () | 1898448..1898759 | + | 312 | WP_006252147.1 | HI1450 family dsDNA-mimic protein | - |
| BG549_RS09375 () | 1898781..1899293 | + | 513 | WP_006252146.1 | 4-hydroxyphenylacetate 3-monooxygenase, reductase component | - |
| BG549_RS09380 () | 1899411..1900283 | + | 873 | WP_006249928.1 | SAM-dependent methyltransferase TehB | - |
| BG549_RS09385 () | 1900421..1901458 | + | 1038 | WP_006249927.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| BG549_RS09390 () | 1901536..1901814 | + | 279 | WP_006249926.1 | DUF1294 domain-containing protein | - |
| BG549_RS09395 () | 1901957..1903384 | + | 1428 | WP_006249925.1 | aspartate ammonia-lyase | - |
| BG549_RS09400 () | 1903459..1905477 | - | 2019 | WP_006252143.1 | DNA helicase Rep | - |
| BG549_RS09405 () | 1905725..1906840 | + | 1116 | WP_006249922.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| BG549_RS09410 () | 1906827..1907690 | + | 864 | WP_006249921.1 | spermidine/putrescine ABC transporter permease PotB | - |
| BG549_RS09415 () | 1907690..1908457 | + | 768 | WP_147009493.1 | spermidine/putrescine ABC transporter permease PotC | - |
| BG549_RS09420 () | 1908648..1909571 | + | 924 | WP_006249919.1 | oligopeptide ABC transporter permease OppB | - |
| BG549_RS09425 () | 1909586..1910485 | + | 900 | WP_006249918.1 | oligopeptide ABC transporter permease OppC | - |
| BG549_RS09430 () | 1910495..1912090 | + | 1596 | WP_006249917.1 | putative ABC transporter ATP-binding protein YejF | VF |
| BG549_RS09435 () | 1912270..1912665 | + | 396 | WP_006249916.1 | hypothetical protein | - |
| BG549_RS09440 () | 1912875..1915034 | - | 2160 | WP_006249915.1 | putative hemoglobin and hemoglobin-haptoglobin-binding protein 2 | VF |
| BG549_RS09445 () | 1915152..1916018 | + | 867 | WP_006252139.1 | Hemin-binding periplasmic protein HmuT | VF |
| BG549_RS09450 () | 1916029..1917015 | + | 987 | WP_006252138.1 | Hemin transport system permease protein HmuU | VF |
| BG549_RS09455 () | 1917015..1917821 | + | 807 | WP_006249912.1 | Hemin import ATP-binding protein HmuV | VF |
| BG549_RS09460 () | 1917842..1918480 | - | 639 | WP_015587131.1 | phosphoribosylglycinamide formyltransferase | - |
| BG549_RS09465 () | 1918587..1920785 | - | 2199 | Protein_1823 | putative TonB-dependent receptor | VF |
| BG549_RS09470 () | 1920839..1921675 | - | 837 | WP_006249910.1 | ChaN family lipoprotein | - |
| BG549_RS09480 () | 1921936..1922976 | + | 1041 | WP_020824044.1 | IS481 family transposase ISShes15 | Transposase |
| BG549_RS09485 () | 1923246..1923539 | - | 294 | WP_006247812.1 | hypothetical protein | - |
| BG549_RS09490 () | 1923683..1924072 | + | 390 | WP_006247811.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BG549_RS09495 () | 1924044..1924343 | + | 300 | WP_006247810.1 | XRE family transcriptional regulator | - |
| BG549_RS09500 () | 1924416..1925456 | - | 1041 | WP_020824044.1 | IS481 family transposase ISShes15 | Transposase |
| BG549_RS13330 () | 1925560..1925718 | - | 159 | WP_006247809.1 | hypothetical protein | - |
| BG549_RS09510 () | 1925728..1932861 | - | 7134 | WP_020824195.1 | DUF1983 domain-containing protein | - |
| BG549_RS09515 () | 1932864..1933454 | - | 591 | WP_020824196.1 | tail assembly protein | - |
| BG549_RS09520 () | 1933723..1934454 | - | 732 | WP_020824197.1 | C40 family peptidase | - |
| BG549_RS09525 () | 1934458..1935174 | - | 717 | WP_020824198.1 | phage minor tail protein L | - |
| BG549_RS09530 () | 1935174..1935503 | - | 330 | WP_020824199.1 | phage tail protein | - |
| BG549_RS09535 () | 1935503..1939054 | - | 3552 | WP_020824200.1 | phage tail tape measure protein | - |
| BG549_RS09540 () | 1939108..1939335 | - | 228 | WP_020824201.1 | hypothetical protein | - |
| BG549_RS09545 () | 1939398..1939628 | - | 231 | WP_020824202.1 | DUF4035 domain-containing protein | - |
| BG549_RS09550 () | 1939673..1940074 | - | 402 | WP_020824203.1 | hypothetical protein | - |
| BG549_RS09555 () | 1940157..1940798 | - | 642 | WP_020824204.1 | hypothetical protein | - |
| BG549_RS09560 () | 1940826..1941218 | - | 393 | WP_020824205.1 | phage tail protein | - |
| BG549_RS09565 () | 1941215..1941739 | - | 525 | WP_020824206.1 | phage tail protein | - |
| BG549_RS09570 () | 1941743..1942045 | - | 303 | WP_020824207.1 | phage tail protein | - |
| BG549_RS09575 () | 1942038..1942361 | - | 324 | WP_020824208.1 | DUF2190 family protein | - |
| BG549_RS13335 () | 1942374..1942535 | - | 162 | WP_158497199.1 | hypothetical protein | - |
| BG549_RS09580 () | 1942614..1944575 | - | 1962 | WP_020824209.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| BG549_RS09585 () | 1944979..1946175 | - | 1197 | WP_020824210.1 | hypothetical protein | - |
| BG549_RS09590 () | 1946179..1947690 | - | 1512 | WP_142789512.1 | phage portal protein | - |
| BG549_RS09595 () | 1947690..1947914 | - | 225 | WP_015484701.1 | hypothetical protein | - |
| BG549_RS09600 () | 1947911..1950022 | - | 2112 | WP_142778020.1 | phage terminase large subunit family protein | - |
| BG549_RS09605 () | 1950022..1950501 | - | 480 | WP_020824213.1 | DUF1441 family protein | - |
| BG549_RS13340 () | 1950771..1951004 | - | 234 | WP_020824118.1 | hypothetical protein | - |
| BG549_RS09615 () | 1950970..1951299 | - | 330 | WP_020824214.1 | DUF2570 domain-containing protein | - |
| BG549_RS09620 () | 1951300..1951893 | - | 594 | WP_020824215.1 | glycoside hydrolase family 19 protein | - |
| BG549_RS09625 () | 1951883..1952236 | - | 354 | WP_020824216.1 | phage holin, lambda family | - |
| BG549_RS13345 () | 1952379..1952549 | - | 171 | WP_006250096.1 | hypothetical protein | - |
| BG549_RS09635 () | 1952575..1952760 | - | 186 | WP_006251707.1 | hypothetical protein | - |
| BG549_RS09645 () | 1953269..1953463 | + | 195 | WP_006251708.1 | hypothetical protein | - |
| BG549_RS09650 () | 1953431..1953871 | - | 441 | WP_006252752.1 | hypothetical protein | - |
| BG549_RS09655 () | 1953861..1954220 | - | 360 | WP_020824218.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BG549_RS09660 () | 1954213..1955241 | - | 1029 | WP_020824219.1 | DUF968 domain-containing protein | - |
| BG549_RS09665 () | 1955368..1955961 | - | 594 | WP_061888639.1 | adenine methyltransferase | - |
| BG549_RS09670 () | 1955972..1957018 | - | 1047 | WP_020824125.1 | conserved phage C-terminal domain-containing protein | - |
| BG549_RS09675 () | 1957015..1957854 | - | 840 | WP_006252350.1 | Rha family transcriptional regulator | - |
| BG549_RS09680 () | 1958030..1958290 | - | 261 | WP_006252483.1 | hypothetical protein | - |
| BG549_RS09685 () | 1958311..1958511 | - | 201 | WP_006248825.1 | helix-turn-helix domain-containing protein | - |
| BG549_RS09690 () | 1958642..1959325 | + | 684 | WP_006252485.1 | helix-turn-helix transcriptional regulator | - |
| BG549_RS09695 () | 1959400..1959780 | + | 381 | WP_006248823.1 | hypothetical protein | - |
| BG549_RS09700 () | 1959785..1960270 | + | 486 | WP_006252741.1 | hypothetical protein | - |
| BG549_RS09705 () | 1960401..1960583 | + | 183 | WP_006250075.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BG549_RS09710 () | 1960622..1961041 | + | 420 | WP_006250984.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BG549_RS09715 () | 1961108..1961413 | - | 306 | WP_006250985.1 | HigA family addiction module antidote protein | - |
| BG549_RS09720 () | 1961422..1961697 | - | 276 | WP_006250986.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BG549_RS09725 () | 1961987..1962217 | + | 231 | WP_006250987.1 | hypothetical protein | - |
| BG549_RS09730 () | 1962696..1963019 | - | 324 | WP_006250988.1 | hypothetical protein | - |
| BG549_RS09735 () | 1963212..1963397 | + | 186 | WP_020824222.1 | hypothetical protein | - |
| BG549_RS13350 () | 1963381..1963545 | + | 165 | WP_020824223.1 | hypothetical protein | - |
| BG549_RS09740 () | 1963551..1964009 | + | 459 | WP_006253113.1 | single-stranded DNA-binding protein | - |
| BG549_RS09745 () | 1964045..1964404 | + | 360 | WP_006250991.1 | hypothetical protein | - |
| BG549_RS09750 () | 1964476..1965279 | + | 804 | WP_020824224.1 | DUF2303 family protein | - |
| BG549_RS09755 () | 1965373..1965807 | + | 435 | WP_020824225.1 | hypothetical protein | - |
| BG549_RS09760 () | 1965817..1966305 | + | 489 | WP_020824226.1 | DUF551 domain-containing protein | - |
| BG549_RS09765 () | 1966326..1966535 | + | 210 | WP_020824227.1 | hypothetical protein | - |
| BG549_RS09770 () | 1966682..1966807 | + | 126 | WP_006248807.1 | Com family DNA-binding transcriptional regulator | - |
| BG549_RS09775 () | 1966854..1967696 | + | 843 | WP_020824228.1 | hypothetical protein | - |
| BG549_RS09780 () | 1967759..1968142 | + | 384 | WP_020824134.1 | hypothetical protein | - |
| BG549_RS09785 () | 1968192..1968467 | + | 276 | WP_020824229.1 | DUF4224 domain-containing protein | - |
| BG549_RS09790 () | 1968427..1969482 | + | 1056 | WP_006251368.1 | hypothetical protein ; Integrase | Integrase |
| BG549_RS09795 () | 1969630..1970892 | - | 1263 | WP_006249908.1 | serine hydroxymethyltransferase | - |
| BG549_RS09800 () | 1971168..1971389 | - | 222 | WP_006249906.1 | hypothetical protein | - |
| BG549_RS09805 () | 1971477..1972508 | - | 1032 | WP_006252134.1 | methionine synthase | - |
| BG549_RS09810 () | 1972596..1973573 | - | 978 | WP_006252133.1 | DUF1852 family protein | - |
| BG549_RS09815 () | 1973712..1974596 | - | 885 | WP_006252132.1 | NAD(+) kinase | - |
| BG549_RS09820 () | 1974606..1975640 | - | 1035 | WP_006252131.1 | rRNA methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|