MGE detailed information
MGE type: Prophage MGE length: 78121 bp
Accession: NZ_CP017488 Location: 1893259..1971379 Organism: Mannheimia haemolytica strain 39373 Replicon: chromosome
Accession: NZ_CP017488 Location: 1893259..1971379 Organism: Mannheimia haemolytica strain 39373 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG550_RS09325 () | 1888579..1889163 | + | 585 | WP_006252152.1 | LPS export ABC transporter periplasmic protein LptC | - |
| BG550_RS09330 () | 1889187..1889693 | + | 507 | WP_006252151.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| BG550_RS09335 () | 1889705..1890430 | + | 726 | WP_006249940.1 | LPS export ABC transporter ATP-binding protein | - |
| BG550_RS09340 () | 1890472..1890984 | + | 513 | WP_006249939.1 | PTS sugar transporter subunit IIA | - |
| BG550_RS09345 () | 1890997..1891860 | + | 864 | WP_006252150.1 | RNase adapter RapZ | - |
| BG550_RS09350 () | 1891943..1893127 | + | 1185 | WP_006249937.1 | FAD-dependent monooxygenase | - |
| BG550_RS09355 () | 1893259..1893843 | + | 585 | WP_006249936.1 | hypothetical protein | - |
| BG550_RS09360 () | 1893910..1894518 | + | 609 | WP_075285046.1 | lipoprotein Hlp | - |
| BG550_RS09365 () | 1894598..1895533 | - | 936 | WP_006249934.1 | permease-like cell division protein FtsX | - |
| BG550_RS09370 () | 1895543..1896196 | - | 654 | WP_006249933.1 | Cell division ATP-binding protein FtsE | VF |
| BG550_RS09375 () | 1896189..1897685 | - | 1497 | WP_006249932.1 | signal recognition particle-docking protein FtsY | - |
| BG550_RS09380 () | 1897764..1898354 | + | 591 | WP_006249931.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BG550_RS09385 () | 1898438..1898749 | + | 312 | WP_006252147.1 | HI1450 family dsDNA-mimic protein | - |
| BG550_RS09390 () | 1898771..1899283 | + | 513 | WP_006252146.1 | 4-hydroxyphenylacetate 3-monooxygenase, reductase component | - |
| BG550_RS09395 () | 1899401..1900273 | + | 873 | WP_006249928.1 | SAM-dependent methyltransferase TehB | - |
| BG550_RS09400 () | 1900411..1901448 | + | 1038 | WP_006249927.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| BG550_RS09405 () | 1901526..1901804 | + | 279 | WP_006249926.1 | DUF1294 domain-containing protein | - |
| BG550_RS09410 () | 1901947..1903374 | + | 1428 | WP_006249925.1 | aspartate ammonia-lyase | - |
| BG550_RS09415 () | 1903449..1905467 | - | 2019 | WP_006252143.1 | DNA helicase Rep | - |
| BG550_RS09420 () | 1905715..1906830 | + | 1116 | WP_006249922.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| BG550_RS09425 () | 1906817..1907680 | + | 864 | WP_006249921.1 | spermidine/putrescine ABC transporter permease PotB | - |
| BG550_RS09430 () | 1907680..1908447 | + | 768 | WP_147009493.1 | spermidine/putrescine ABC transporter permease PotC | - |
| BG550_RS09435 () | 1908638..1909561 | + | 924 | WP_006249919.1 | oligopeptide ABC transporter permease OppB | - |
| BG550_RS09440 () | 1909576..1910475 | + | 900 | WP_006249918.1 | oligopeptide ABC transporter permease OppC | - |
| BG550_RS09445 () | 1910485..1912080 | + | 1596 | WP_006249917.1 | putative ABC transporter ATP-binding protein YejF | VF |
| BG550_RS09450 () | 1912260..1912655 | + | 396 | WP_006249916.1 | hypothetical protein | - |
| BG550_RS09455 () | 1912865..1915024 | - | 2160 | WP_006249915.1 | putative hemoglobin and hemoglobin-haptoglobin-binding protein 2 | VF |
| BG550_RS09460 () | 1915142..1916008 | + | 867 | WP_006252139.1 | Hemin-binding periplasmic protein HmuT | VF |
| BG550_RS09465 () | 1916019..1917005 | + | 987 | WP_006252138.1 | Hemin transport system permease protein HmuU | VF |
| BG550_RS09470 () | 1917005..1917811 | + | 807 | WP_006249912.1 | Hemin import ATP-binding protein HmuV | VF |
| BG550_RS09475 () | 1917832..1918470 | - | 639 | WP_015587131.1 | phosphoribosylglycinamide formyltransferase | - |
| BG550_RS09480 () | 1918577..1920775 | - | 2199 | Protein_1822 | putative TonB-dependent receptor | VF |
| BG550_RS09485 () | 1920829..1921665 | - | 837 | WP_006249910.1 | ChaN family lipoprotein | - |
| BG550_RS09495 () | 1921926..1922966 | + | 1041 | WP_020824044.1 | IS481 family transposase ISShes15 | Transposase |
| BG550_RS09500 () | 1923236..1923529 | - | 294 | WP_006247812.1 | hypothetical protein | - |
| BG550_RS09505 () | 1923673..1924062 | + | 390 | WP_006247811.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BG550_RS09510 () | 1924034..1924333 | + | 300 | WP_006247810.1 | XRE family transcriptional regulator | - |
| BG550_RS09515 () | 1924406..1925446 | - | 1041 | WP_020824044.1 | IS481 family transposase ISShes15 | Transposase |
| BG550_RS13330 () | 1925550..1925708 | - | 159 | WP_006247809.1 | hypothetical protein | - |
| BG550_RS09525 () | 1925718..1932851 | - | 7134 | WP_020824195.1 | DUF1983 domain-containing protein | - |
| BG550_RS09530 () | 1932854..1933444 | - | 591 | WP_020824196.1 | tail assembly protein | - |
| BG550_RS09535 () | 1933713..1934444 | - | 732 | WP_020824197.1 | C40 family peptidase | - |
| BG550_RS09540 () | 1934448..1935164 | - | 717 | WP_020824198.1 | phage minor tail protein L | - |
| BG550_RS09545 () | 1935164..1935493 | - | 330 | WP_020824199.1 | phage tail protein | - |
| BG550_RS09550 () | 1935493..1939044 | - | 3552 | WP_020824200.1 | phage tail tape measure protein | - |
| BG550_RS09555 () | 1939098..1939325 | - | 228 | WP_020824201.1 | hypothetical protein | - |
| BG550_RS09560 () | 1939388..1939618 | - | 231 | WP_020824202.1 | DUF4035 domain-containing protein | - |
| BG550_RS09565 () | 1939663..1940064 | - | 402 | WP_020824203.1 | hypothetical protein | - |
| BG550_RS09570 () | 1940147..1940788 | - | 642 | WP_020824204.1 | hypothetical protein | - |
| BG550_RS09575 () | 1940816..1941208 | - | 393 | WP_020824205.1 | phage tail protein | - |
| BG550_RS09580 () | 1941205..1941729 | - | 525 | WP_020824206.1 | phage tail protein | - |
| BG550_RS09585 () | 1941733..1942035 | - | 303 | WP_020824207.1 | phage tail protein | - |
| BG550_RS09590 () | 1942028..1942351 | - | 324 | WP_020824208.1 | DUF2190 family protein | - |
| BG550_RS13335 () | 1942364..1942525 | - | 162 | WP_158497199.1 | hypothetical protein | - |
| BG550_RS09595 () | 1942604..1944565 | - | 1962 | WP_020824209.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| BG550_RS09600 () | 1944969..1946165 | - | 1197 | WP_020824210.1 | hypothetical protein | - |
| BG550_RS09605 () | 1946169..1947680 | - | 1512 | WP_142789512.1 | phage portal protein | - |
| BG550_RS09610 () | 1947680..1947904 | - | 225 | WP_015484701.1 | hypothetical protein | - |
| BG550_RS09615 () | 1947901..1950012 | - | 2112 | WP_142778020.1 | phage terminase large subunit family protein | - |
| BG550_RS09620 () | 1950012..1950491 | - | 480 | WP_020824213.1 | DUF1441 family protein | - |
| BG550_RS13340 () | 1950761..1950994 | - | 234 | WP_020824118.1 | hypothetical protein | - |
| BG550_RS09630 () | 1950960..1951289 | - | 330 | WP_020824214.1 | DUF2570 domain-containing protein | - |
| BG550_RS09635 () | 1951290..1951883 | - | 594 | WP_020824215.1 | glycoside hydrolase family 19 protein | - |
| BG550_RS09640 () | 1951873..1952226 | - | 354 | WP_020824216.1 | phage holin, lambda family | - |
| BG550_RS13345 () | 1952369..1952539 | - | 171 | WP_006250096.1 | hypothetical protein | - |
| BG550_RS09650 () | 1952565..1952750 | - | 186 | WP_006251707.1 | hypothetical protein | - |
| BG550_RS09660 () | 1953259..1953453 | + | 195 | WP_006251708.1 | hypothetical protein | - |
| BG550_RS09665 () | 1953421..1953861 | - | 441 | WP_006252752.1 | hypothetical protein | - |
| BG550_RS09670 () | 1953851..1954210 | - | 360 | WP_020824218.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BG550_RS09675 () | 1954203..1955231 | - | 1029 | WP_020824219.1 | DUF968 domain-containing protein | - |
| BG550_RS09680 () | 1955358..1955951 | - | 594 | WP_061888639.1 | adenine methyltransferase | - |
| BG550_RS09685 () | 1955962..1957008 | - | 1047 | WP_020824125.1 | conserved phage C-terminal domain-containing protein | - |
| BG550_RS09690 () | 1957005..1957844 | - | 840 | WP_006252350.1 | Rha family transcriptional regulator | - |
| BG550_RS09695 () | 1958020..1958280 | - | 261 | WP_006252483.1 | hypothetical protein | - |
| BG550_RS09700 () | 1958301..1958501 | - | 201 | WP_006248825.1 | helix-turn-helix domain-containing protein | - |
| BG550_RS09705 () | 1958632..1959315 | + | 684 | WP_006252485.1 | helix-turn-helix transcriptional regulator | - |
| BG550_RS09710 () | 1959390..1959770 | + | 381 | WP_006248823.1 | hypothetical protein | - |
| BG550_RS09715 () | 1959775..1960260 | + | 486 | WP_006252741.1 | hypothetical protein | - |
| BG550_RS09720 () | 1960391..1960573 | + | 183 | WP_006250075.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BG550_RS09725 () | 1960612..1961031 | + | 420 | WP_006250984.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BG550_RS09730 () | 1961098..1961403 | - | 306 | WP_006250985.1 | HigA family addiction module antidote protein | - |
| BG550_RS09735 () | 1961412..1961687 | - | 276 | WP_006250986.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BG550_RS09740 () | 1961977..1962207 | + | 231 | WP_006250987.1 | hypothetical protein | - |
| BG550_RS09745 () | 1962686..1963009 | - | 324 | WP_006250988.1 | hypothetical protein | - |
| BG550_RS09750 () | 1963202..1963387 | + | 186 | WP_020824222.1 | hypothetical protein | - |
| BG550_RS13350 () | 1963371..1963535 | + | 165 | WP_020824223.1 | hypothetical protein | - |
| BG550_RS09755 () | 1963541..1963999 | + | 459 | WP_006253113.1 | single-stranded DNA-binding protein | - |
| BG550_RS09760 () | 1964035..1964394 | + | 360 | WP_006250991.1 | hypothetical protein | - |
| BG550_RS09765 () | 1964466..1965269 | + | 804 | WP_020824224.1 | DUF2303 family protein | - |
| BG550_RS09770 () | 1965363..1965797 | + | 435 | WP_020824225.1 | hypothetical protein | - |
| BG550_RS09775 () | 1965807..1966295 | + | 489 | WP_020824226.1 | DUF551 domain-containing protein | - |
| BG550_RS09780 () | 1966316..1966525 | + | 210 | WP_020824227.1 | hypothetical protein | - |
| BG550_RS09785 () | 1966672..1966797 | + | 126 | WP_006248807.1 | Com family DNA-binding transcriptional regulator | - |
| BG550_RS09790 () | 1966844..1967686 | + | 843 | WP_020824228.1 | hypothetical protein | - |
| BG550_RS09795 () | 1967749..1968132 | + | 384 | WP_020824134.1 | hypothetical protein | - |
| BG550_RS09800 () | 1968182..1968457 | + | 276 | WP_020824229.1 | DUF4224 domain-containing protein | - |
| BG550_RS09805 () | 1968417..1969472 | + | 1056 | WP_006251368.1 | hypothetical protein ; Integrase | Integrase |
| BG550_RS09810 () | 1969620..1970882 | - | 1263 | WP_006249908.1 | serine hydroxymethyltransferase | - |
| BG550_RS09815 () | 1971158..1971379 | - | 222 | WP_006249906.1 | hypothetical protein | - |
| BG550_RS09820 () | 1971467..1972498 | - | 1032 | WP_006252134.1 | methionine synthase | - |
| BG550_RS09825 () | 1972586..1973563 | - | 978 | WP_006252133.1 | DUF1852 family protein | - |
| BG550_RS09830 () | 1973702..1974586 | - | 885 | WP_006252132.1 | NAD(+) kinase | - |
| BG550_RS09835 () | 1974596..1975630 | - | 1035 | WP_006252131.1 | rRNA methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|