MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48379 bp
Accession: NZ_CP017453 Location: 835683..884061 Organism: Dickeya solani D s0432-1 Replicon: chromosome
Accession: NZ_CP017453 Location: 835683..884061 Organism: Dickeya solani D s0432-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD21_RS03590 () | 831063..831617 | + | 555 | WP_022633140.1 | flavodoxin family protein | - |
| BJD21_RS03595 () | 831690..831857 | - | 168 | WP_022633139.1 | YqaE/Pmp3 family membrane protein | - |
| BJD21_RS03600 () | 832285..832674 | + | 390 | WP_023637758.1 | helix-turn-helix domain-containing protein | - |
| BJD21_RS03605 () | 832708..833859 | + | 1152 | WP_022633138.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| BJD21_RS03615 () | 834722..835513 | + | 792 | WP_022633137.1 | DgsA anti-repressor MtfA | - |
| BJD21_RS03625 () | 835860..837142 | + | 1283 | Protein_713 | Prophage integrase IntA ; Integrase | Integrase |
| BJD21_RS03630 () | 837298..837609 | - | 312 | WP_022633134.1 | DUF736 domain-containing protein | - |
| BJD21_RS03640 () | 838625..839551 | + | 927 | WP_022633133.1 | hypothetical protein | - |
| BJD21_RS21675 () | 839713..839859 | - | 147 | WP_155246175.1 | hypothetical protein | - |
| BJD21_RS03650 () | 840158..841003 | - | 846 | WP_023637756.1 | hypothetical protein | - |
| BJD21_RS03655 () | 841372..845202 | - | 3831 | Protein_718 | PAAR domain-containing protein | - |
| BJD21_RS03660 () | 845220..845660 | - | 441 | WP_023637755.1 | DUF1795 domain-containing protein | - |
| BJD21_RS03665 () | 845738..847600 | - | 1863 | WP_022633129.1 | Actin cross-linking toxin VgrG1 | VF |
| BJD21_RS03670 () | 847713..848231 | - | 519 | WP_022633128.1 | hypothetical protein | VF |
| BJD21_RS03675 () | 848915..849160 | + | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| BJD21_RS03680 () | 849438..849725 | - | 288 | WP_022633127.1 | helix-turn-helix domain-containing protein | - |
| BJD21_RS03685 () | 849859..850137 | + | 279 | WP_012884168.1 | hypothetical protein | VF |
| BJD21_RS03690 () | 850251..850508 | + | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| BJD21_RS03695 () | 851184..851378 | + | 195 | WP_022633126.1 | AlpA family transcriptional regulator | - |
| BJD21_RS03700 () | 851395..851979 | + | 585 | WP_022633125.1 | DUF2857 domain-containing protein | - |
| BJD21_RS03705 () | 851969..852178 | + | 210 | WP_022633124.1 | TraR/DksA family transcriptional regulator | - |
| BJD21_RS03710 () | 852442..853326 | - | 885 | WP_022633123.1 | HTH-type transcriptional regulator ArgP | VF |
| BJD21_RS03715 () | 853458..854855 | + | 1398 | WP_022633122.1 | amidohydrolase family protein | - |
| BJD21_RS03720 () | 854867..855340 | + | 474 | WP_022633121.1 | DMT family transporter | - |
| BJD21_RS03725 () | 855423..856289 | + | 867 | WP_022633120.1 | SMP-30/gluconolactonase/LRE family protein | - |
| BJD21_RS03730 () | 856349..857314 | + | 966 | WP_022633119.1 | aldo/keto reductase | - |
| BJD21_RS03735 () | 857334..857849 | + | 516 | WP_022633118.1 | NAD(P)H-dependent oxidoreductase | - |
| BJD21_RS03740 () | 858415..858648 | + | 234 | WP_022633117.1 | hypothetical protein | - |
| BJD21_RS03745 () | 858718..859365 | + | 648 | WP_022633116.1 | hypothetical protein | VF |
| BJD21_RS03750 () | 859385..859660 | + | 276 | WP_012769221.1 | hypothetical protein | VF |
| BJD21_RS03755 () | 859670..862417 | + | 2748 | WP_022633115.1 | hypothetical protein | VF |
| BJD21_RS03760 () | 862443..863159 | + | 717 | WP_022633114.1 | type IV secretion system protein | - |
| BJD21_RS03765 () | 863171..863395 | + | 225 | WP_022633113.1 | EexN family lipoprotein | - |
| BJD21_RS03770 () | 863407..864435 | + | 1029 | WP_022633112.1 | type IV secretion system protein | - |
| BJD21_RS03775 () | 864656..865339 | + | 684 | WP_022633111.1 | hypothetical protein | VF |
| BJD21_RS03780 () | 865339..866229 | + | 891 | WP_022633110.1 | P-type conjugative transfer protein VirB9 | - |
| BJD21_RS03785 () | 866226..867434 | + | 1209 | Protein_744 | hypothetical protein | VF |
| BJD21_RS03790 () | 867424..868440 | + | 1017 | WP_022633107.1 | hypothetical protein | VF |
| BJD21_RS03795 () | 868481..868783 | + | 303 | WP_022633106.1 | KikA | - |
| BJD21_RS03805 () | 869480..871243 | + | 1764 | Protein_747 | type IV secretory system conjugative DNA transfer family protein | - |
| BJD21_RS03810 () | 871252..871998 | + | 747 | WP_022633104.1 | hypothetical protein | - |
| BJD21_RS03820 () | 872381..872788 | + | 408 | WP_071598628.1 | helix-turn-helix transcriptional regulator | - |
| BJD21_RS03825 () | 872788..874095 | + | 1308 | WP_022633103.1 | type II toxin-antitoxin system HipA family toxin | - |
| BJD21_RS03830 () | 874271..874528 | + | 258 | WP_022633102.1 | hypothetical protein | - |
| BJD21_RS03835 () | 874525..874839 | - | 315 | WP_022633101.1 | CcdB family protein | Toxin Detail |
| BJD21_RS03840 () | 874842..875078 | - | 237 | WP_022633100.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| BJD21_RS03845 () | 875399..876343 | - | 945 | WP_022633099.1 | DUF1738 domain-containing protein | - |
| BJD21_RS21680 () | 876734..877027 | + | 294 | WP_146053334.1 | hypothetical protein | - |
| BJD21_RS03850 () | 877091..877492 | + | 402 | WP_023637748.1 | hypothetical protein | - |
| BJD21_RS03855 () | 877853..879502 | - | 1650 | WP_022633097.1 | hypothetical protein | - |
| BJD21_RS03860 () | 879504..882503 | - | 3000 | WP_080644163.1 | ATP-binding protein | - |
| BJD21_RS03865 () | 882466..883530 | - | 1065 | WP_026594454.1 | DNA cytosine methyltransferase | - |
| BJD21_RS21685 () | 884993..885280 | + | 288 | WP_146053333.1 | hypothetical protein | - |
| BJD21_RS03870 () | 885682..886899 | + | 1218 | WP_022633094.1 | dienelactone hydrolase family protein | - |
| BJD21_RS03875 () | 886814..887689 | + | 876 | WP_026594453.1 | alpha/beta hydrolase | - |
| BJD21_RS03880 () | 888101..888775 | - | 675 | WP_022633092.1 | glutathione S-transferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|