MGE detailed information
MGE type: Genomic_island MGE length: 21210 bp
Accession: NZ_CP017436 Location: 4710084..4731293 Organism: Escherichia coli O157:H7 strain 2149 Replicon: chromosome
Accession: NZ_CP017436 Location: 4710084..4731293 Organism: Escherichia coli O157:H7 strain 2149 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4C44_RS24230 () | 4705810..4706352 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| A4C44_RS24240 () | 4706645..4708795 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A4C44_RS24245 () | 4708845..4709048 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A4C44_RS24250 () | 4709059..4710015 | + | 957 | WP_001459238.1 | GTPase | - |
| A4C44_RS24255 () | 4710084..4711442 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A4C44_RS24260 () | 4711451..4711735 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A4C44_RS24265 () | 4712013..4714445 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A4C44_RS24270 () | 4714512..4715981 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A4C44_RS24275 () | 4715981..4717735 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4717885..4717961 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4717885..4717961 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4717885..4717961 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4717885..4717961 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4717885..4717961 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4717885..4717961 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4717885..4717961 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4717885..4717961 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| A4C44_RS24280 () | 4717956..4718297 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| A4C44_RS30190 () | 4718344..4719507 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A4C44_RS24290 () | 4719555..4720436 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A4C44_RS24295 () | 4720533..4720697 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A4C44_RS24300 () | 4720874..4722286 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A4C44_RS31665 () | 4722529..4722729 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| A4C44_RS24305 () | 4722734..4723486 | - | 753 | Protein_4589 | Recombination-promoting nuclease RpnD | VF |
| A4C44_RS24310 () | 4723953..4725185 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A4C44_RS24315 () | 4725226..4726497 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A4C44_RS24320 () | 4726613..4727764 | + | 1152 | WP_001459237.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A4C44_RS24325 () | 4727774..4728541 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| A4C44_RS24330 () | 4728538..4728804 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A4C44_RS24335 () | 4729116..4731293 | + | 2178 | WP_000535056.1 | hypothetical protein | VF |
| A4C44_RS24340 () | 4731559..4732401 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| A4C44_RS24345 () | 4732469..4733647 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |