MGE detailed information
MGE type: Genomic_island MGE length: 24578 bp
Accession: NZ_CP017319 Location: 1261126..1285703 Organism: Xanthomonas campestris pv. campestris str. CN18 Replicon: chromosome
Accession: NZ_CP017319 Location: 1261126..1285703 Organism: Xanthomonas campestris pv. campestris str. CN18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIU85_RS05425 () | 1256745..1257530 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| BIU85_RS05430 () | 1257676..1258470 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| BIU85_RS05435 () | 1258519..1258719 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| BIU85_RS05440 () | 1258908..1260692 | + | 1785 | WP_075285404.1 | autotransporter domain-containing protein | - |
| BIU85_RS05450 () | 1261171..1261542 | + | 372 | WP_075286491.1 | hypothetical protein | - |
| BIU85_RS23830 () | 1261832..1262062 | - | 231 | WP_157769280.1 | hypothetical protein | - |
| BIU85_RS05455 () | 1262126..1262281 | + | 156 | WP_075285405.1 | hypothetical protein | - |
| BIU85_RS05460 () | 1262458..1262853 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| BIU85_RS05465 () | 1262944..1263336 | + | 393 | WP_012437593.1 | H-NS histone family protein | - |
| BIU85_RS05475 () | 1263861..1265990 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| BIU85_RS05480 () | 1266483..1267358 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| BIU85_RS05485 () | 1268008..1268685 | + | 678 | WP_003490678.1 | response regulator transcription factor | - |
| BIU85_RS05490 () | 1268678..1270012 | + | 1335 | WP_162808569.1 | HAMP domain-containing histidine kinase | - |
| BIU85_RS05495 () | 1270155..1270646 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| BIU85_RS05500 () | 1270643..1270933 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| BIU85_RS05505 () | 1271008..1271409 | - | 402 | WP_040940795.1 | type I toxin-antitoxin system SymE family toxin | - |
| BIU85_RS05510 () | 1271552..1272660 | + | 1109 | WP_087942068.1 | IS3 family transposase | - |
| BIU85_RS05520 () | 1273145..1273768 | - | 624 | WP_075285407.1 | dephospho-CoA kinase | - |
| BIU85_RS05525 () | 1273782..1274645 | - | 864 | WP_075285408.1 | A24 family peptidase | - |
| BIU85_RS05530 () | 1274651..1275907 | - | 1257 | WP_075285409.1 | type II secretion system F family protein | - |
| BIU85_RS05535 () | 1276244..1276693 | + | 450 | WP_075285410.1 | pilin | - |
| BIU85_RS05540 () | 1276773..1277183 | + | 411 | WP_075285411.1 | pilin | - |
| BIU85_RS05545 () | 1277242..1278948 | + | 1707 | WP_198407549.1 | type IV-A pilus assembly ATPase PilB | - |
| BIU85_RS05550 () | 1279366..1280760 | - | 1395 | WP_162808570.1 | sigma-54 dependent transcriptional regulator | - |
| BIU85_RS05555 () | 1280970..1282580 | - | 1611 | WP_040940804.1 | HAMP domain-containing histidine kinase | - |
| BIU85_RS05560 () | 1282814..1283983 | + | 1170 | WP_011038209.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BIU85_RS05565 () | 1284008..1284883 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| BIU85_RS05570 () | 1284987..1285397 | + | 411 | WP_029628876.1 | DNA-binding protein | - |
| BIU85_RS05575 () | 1285401..1285703 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BIU85_RS05580 () | 1285703..1287358 | + | 1656 | WP_162808571.1 | NAD+ synthase | - |
| BIU85_RS05585 () | 1287352..1288338 | - | 987 | WP_050911329.1 | hypothetical protein | - |
| BIU85_RS05590 () | 1288790..1289671 | - | 882 | WP_011038204.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|