MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89107 bp
Accession: NZ_CP017293 Location: 4783902..4873008 Organism: Pseudomonas aeruginosa strain PA83 Replicon: chromosome
Accession: NZ_CP017293 Location: 4783902..4873008 Organism: Pseudomonas aeruginosa strain PA83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSA83_RS22615 () | 4779420..4780031 | - | 612 | WP_003163144.1 | type 1 fimbrial protein | - |
| PSA83_RS22620 () | 4780476..4780853 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| PSA83_RS22625 () | 4781438..4782076 | + | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| PSA83_RS22630 () | 4782462..4783022 | + | 561 | WP_003108605.1 | hypothetical protein | - |
| PSA83_RS22635 () | 4783143..4783547 | - | 405 | WP_003108604.1 | acyl-CoA thioesterase | - |
| PSA83_RS22640 () | 4784045..4784911 | + | 867 | WP_023108753.1 | ParA family protein | - |
| PSA83_RS22645 () | 4784913..4785650 | + | 738 | WP_023108754.1 | hypothetical protein | - |
| PSA83_RS22650 () | 4785647..4786144 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| PSA83_RS22655 () | 4786150..4786602 | + | 453 | Protein_4371 | hypothetical protein | - |
| PSA83_RS22660 () | 4786663..4787292 | + | 630 | WP_044060901.1 | hypothetical protein | - |
| PSA83_RS22665 () | 4787292..4787993 | + | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| PSA83_RS22670 () | 4787990..4788697 | + | 708 | WP_023082649.1 | HNH endonuclease | - |
| PSA83_RS22675 () | 4788681..4788905 | + | 225 | WP_009315888.1 | hypothetical protein | - |
| PSA83_RS22680 () | 4788902..4790245 | + | 1344 | WP_023082650.1 | replicative DNA helicase | - |
| PSA83_RS34795 () | 4790684..4791130 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| PSA83_RS34800 () | 4791314..4792273 | + | 960 | WP_023082651.1 | hypothetical protein | - |
| PSA83_RS22695 () | 4792680..4792865 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| PSA83_RS22700 () | 4792855..4793382 | + | 528 | WP_003448815.1 | hypothetical protein | - |
| PSA83_RS22705 () | 4793379..4793636 | + | 258 | WP_003448812.1 | hypothetical protein | - |
| PSA83_RS22710 () | 4793629..4793868 | + | 240 | WP_023082652.1 | hypothetical protein | - |
| PSA83_RS22715 () | 4793861..4794094 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PSA83_RS22720 () | 4794094..4795116 | + | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| PSA83_RS22725 () | 4795113..4796003 | + | 891 | WP_003119279.1 | DNA adenine methylase | - |
| PSA83_RS22730 () | 4796024..4796293 | + | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| PSA83_RS22735 () | 4796290..4798023 | + | 1734 | WP_003448780.1 | ParB family protein | - |
| PSA83_RS22740 () | 4798051..4798806 | + | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| PSA83_RS22745 () | 4798809..4800134 | + | 1326 | WP_031675614.1 | hypothetical protein | - |
| PSA83_RS35070 () | 4804010..4804207 | + | 198 | WP_019396765.1 | hypothetical protein | - |
| PSA83_RS22755 () | 4804364..4805092 | + | 729 | WP_023102567.1 | TIGR03761 family integrating conjugative element protein | - |
| PSA83_RS22760 () | 4805098..4805646 | + | 549 | WP_024007695.1 | DUF3158 family protein | - |
| PSA83_RS22765 () | 4805694..4806536 | + | 843 | WP_024007696.1 | Rha family transcriptional regulator | - |
| PSA83_RS22770 () | 4806566..4807054 | + | 489 | WP_023104171.1 | single-stranded DNA-binding protein | - |
| PSA83_RS22775 () | 4807204..4807515 | + | 312 | WP_022579619.1 | helix-turn-helix domain-containing protein | - |
| PSA83_RS34990 () | 4807466..4807789 | + | 324 | WP_170987004.1 | CrpP family protein | - |
| PSA83_RS22785 () | 4807905..4809824 | + | 1920 | WP_022579620.1 | type I DNA topoisomerase | - |
| PSA83_RS22790 () | 4809832..4810584 | + | 753 | WP_023093669.1 | hypothetical protein | - |
| PSA83_RS22795 () | 4810904..4812793 | + | 1890 | WP_023093670.1 | hypothetical protein | - |
| PSA83_RS22800 () | 4812790..4814766 | + | 1977 | WP_023093671.1 | DEAD/DEAH box helicase | - |
| PSA83_RS22805 () | 4814905..4815240 | + | 336 | WP_022579623.1 | hypothetical protein | - |
| PSA83_RS22810 () | 4815323..4815613 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| PSA83_RS22815 () | 4815610..4815909 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSA83_RS22820 () | 4816111..4817235 | + | 1125 | WP_024007699.1 | Protein translocase subunit SecE | VF |
| PSA83_RS22825 () | 4817235..4818944 | + | 1710 | WP_003123331.1 | RNA polymerase sigma-H factor | VF |
| PSA83_RS22830 () | 4818948..4820273 | + | 1326 | WP_022579625.1 | type 4b pilus protein PilO2 | - |
| PSA83_RS22835 () | 4820263..4820796 | + | 534 | WP_003149521.1 | type IV pilus biogenesis protein PilP | - |
| PSA83_RS22840 () | 4820805..4822385 | + | 1581 | WP_003149523.1 | Mini-ribonuclease 3 | VF |
| PSA83_RS22845 () | 4822385..4823464 | + | 1080 | WP_003109360.1 | Cysteine--tRNA ligase | VF |
| PSA83_RS22850 () | 4823486..4824016 | + | 531 | WP_003099765.1 | Serine acetyltransferase | VF |
| PSA83_RS22855 () | 4824013..4824969 | + | 957 | WP_023093675.1 | Flp pilus assembly complex ATPase component TadA | - |
| PSA83_RS22860 () | 4824962..4826341 | + | 1380 | WP_022579630.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | VF |
| PSA83_RS22865 () | 4826359..4826796 | + | 438 | WP_003120998.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | VF |
| PSA83_RS22875 () | 4827718..4828284 | + | 567 | WP_003120999.1 | hypothetical protein | - |
| PSA83_RS22880 () | 4828361..4828540 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| PSA83_RS22885 () | 4828999..4829487 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| PSA83_RS34995 () | 4829625..4829783 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| PSA83_RS22890 () | 4829857..4830054 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| PSA83_RS22895 () | 4830246..4830959 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| PSA83_RS22900 () | 4831195..4831545 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| PSA83_RS22905 () | 4831602..4832234 | + | 633 | WP_003149546.1 | DUF3275 family protein | - |
| PSA83_RS22910 () | 4832231..4832506 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| PSA83_RS22915 () | 4832576..4832938 | + | 363 | WP_034019112.1 | hypothetical protein | - |
| PSA83_RS22920 () | 4833006..4833260 | + | 255 | WP_003149550.1 | hypothetical protein | - |
| PSA83_RS22925 () | 4833352..4833957 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| PSA83_RS22930 () | 4833987..4835432 | + | 1446 | WP_024007702.1 | class I SAM-dependent methyltransferase | - |
| PSA83_RS22935 () | 4835538..4837787 | + | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| PSA83_RS22940 () | 4838108..4838362 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| PSA83_RS22955 () | 4839003..4839200 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| PSA83_RS22960 () | 4839418..4840110 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| PSA83_RS22965 () | 4840121..4840876 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| PSA83_RS22970 () | 4840861..4841442 | + | 582 | WP_003117072.1 | Fructose-bisphosphate aldolase | VF |
| PSA83_RS22975 () | 4841439..4841939 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PSA83_RS22980 () | 4842011..4842217 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| PSA83_RS22985 () | 4842221..4844452 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| PSA83_RS22990 () | 4844452..4845198 | + | 747 | WP_024007703.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PSA83_RS22995 () | 4845216..4845707 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| PSA83_RS23000 () | 4845949..4847430 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| PSA83_RS34805 () | 4847562..4848671 | + | 1110 | WP_153565777.1 | hypothetical protein | - |
| PSA83_RS23010 () | 4848717..4849028 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| PSA83_RS23015 () | 4849201..4849500 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| PSA83_RS23020 () | 4849594..4849932 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| PSA83_RS23025 () | 4849929..4850168 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| PSA83_RS23030 () | 4850186..4850542 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PSA83_RS23035 () | 4850553..4850939 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| PSA83_RS23040 () | 4850936..4851595 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| PSA83_RS23045 () | 4851592..4852476 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| PSA83_RS23050 () | 4852460..4853965 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| PSA83_RS23055 () | 4853943..4854386 | + | 444 | WP_031293817.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PSA83_RS23060 () | 4854386..4857328 | + | 2943 | WP_020751100.1 | conjugative transfer ATPase | - |
| PSA83_RS23065 () | 4857325..4857609 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| PSA83_RS23070 () | 4857606..4858265 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| PSA83_RS23075 () | 4858262..4858480 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| PSA83_RS23090 () | 4860623..4861054 | + | 432 | WP_024007714.1 | TIGR03757 family integrating conjugative element protein | - |
| PSA83_RS23095 () | 4861054..4861992 | + | 939 | WP_024007715.1 | TIGR03756 family integrating conjugative element protein | - |
| PSA83_RS23100 () | 4862010..4863398 | + | 1389 | WP_031754774.1 | integrating conjugative element protein | - |
| PSA83_RS23105 () | 4863398..4863745 | + | 348 | WP_024007717.1 | hypothetical protein | - |
| PSA83_RS23110 () | 4863742..4865268 | + | 1527 | WP_023132230.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PSA83_RS23115 () | 4865317..4865664 | - | 348 | WP_078452267.1 | hypothetical protein | - |
| PSA83_RS23120 () | 4865783..4866055 | + | 273 | WP_003123374.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PSA83_RS23125 () | 4866059..4866418 | + | 360 | WP_024007718.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PSA83_RS23130 () | 4866428..4867345 | - | 918 | WP_023082681.1 | hypothetical protein | - |
| PSA83_RS23135 () | 4867371..4867610 | - | 240 | WP_023082682.1 | hypothetical protein | - |
| PSA83_RS23140 () | 4867994..4869244 | + | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| PSA83_RS23145 () | 4869404..4871326 | + | 1923 | WP_022580137.1 | helicase/relaxase domain-containing protein | - |
| PSA83_RS23150 () | 4871323..4872624 | + | 1302 | WP_088922239.1 | Membrane lipoprotein TmpC ; Integrase | Integrase |
| PSA83_RS23160 () | 4873096..4873770 | - | 675 | WP_003117095.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| PSA83_RS23165 () | 4873786..4874433 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| PSA83_RS23170 () | 4874653..4875477 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| PSA83_RS23175 () | 4875487..4875993 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| PSA83_RS23180 () | 4876046..4877344 | - | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|