MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92231 bp
Accession: NZ_CP017286 Location: 1..92231 Organism: Klebsiella variicola strain GJ3 Replicon: plasmid pKPGJ-3b
Accession: NZ_CP017286 Location: 1..92231 Organism: Klebsiella variicola strain GJ3 Replicon: plasmid pKPGJ-3b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBD65_RS00660 () | 5240..5965 | + | 726 | WP_025712712.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| BBD65_RS00665 () | 6120..6716 | + | 597 | WP_077138885.1 | fertility inhibition protein FinO | - |
| BBD65_RS00670 () | 6737..7084 | + | 348 | WP_015632524.1 | hypothetical protein | - |
| BBD65_RS00675 () | 7555..8199 | + | 645 | WP_049246155.1 | hypothetical protein | - |
| BBD65_RS00680 () | 8255..8905 | + | 651 | WP_060598856.1 | DUF2726 domain-containing protein | - |
| BBD65_RS00685 () | 8902..9210 | + | 309 | WP_070612642.1 | hypothetical protein | - |
| BBD65_RS00690 () | 9388..9867 | + | 480 | WP_072198240.1 | phospholipase D family protein | - |
| BBD65_RS00695 () | 10187..10465 | + | 279 | WP_004199332.1 | replication regulatory protein RepA | - |
| BBD65_RS00700 () | 10682..10759 | + | 78 | WP_099913970.1 | RepA leader peptide Tap | - |
| BBD65_RS00705 () | 10752..11609 | + | 858 | WP_004200825.1 | incFII family plasmid replication initiator RepA | - |
| BBD65_RS00725 () | 12703..13800 | + | 1098 | WP_015632529.1 | patatin-like phospholipase family protein | - |
| BBD65_RS00730 () | 13787..14851 | + | 1065 | WP_077138887.1 | hypothetical protein | - |
| BBD65_RS00735 () | 14848..16617 | + | 1770 | WP_015632531.1 | ThiF family adenylyltransferase | - |
| BBD65_RS00740 () | 16592..17053 | + | 462 | WP_032433950.1 | Mov34/MPN/PAD-1 family protein | - |
| BBD65_RS29825 () | 17133..17883 | - | 751 | Protein_15 | IS3 family transposase | - |
| BBD65_RS00755 () | 17972..19801 | + | 1830 | WP_015632533.1 | NACHT domain-containing protein | - |
| BBD65_RS00760 () | 20173..20535 | + | 363 | WP_015632534.1 | DUF596 domain-containing protein | - |
| BBD65_RS00765 () | 20557..21266 | - | 710 | Protein_18 | AraC family transcriptional regulator ligand-binding domain-containing protein | - |
| BBD65_RS00770 () | 21535..22455 | - | 921 | WP_012540028.1 | AraC family transcriptional regulator | - |
| BBD65_RS00775 () | 22560..23393 | + | 834 | WP_004136823.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| BBD65_RS00780 () | 23613..24608 | - | 996 | WP_004136825.1 | IS110 family transposase IS1663 | Transposase |
| BBD65_RS00785 () | 25062..26006 | - | 945 | WP_077138888.1 | alpha/beta hydrolase | - |
| BBD65_RS00790 () | 26392..27063 | + | 672 | WP_077138864.1 | SOS response-associated peptidase | - |
| BBD65_RS00795 () | 27274..28164 | + | 891 | WP_077138865.1 | DUF2971 domain-containing protein | - |
| BBD65_RS00800 () | 28301..28555 | - | 255 | WP_044246670.1 | hypothetical protein | - |
| BBD65_RS00805 () | 28672..28902 | - | 231 | WP_049118762.1 | hypothetical protein | - |
| BBD65_RS00810 () | 28916..29119 | - | 204 | WP_009484305.1 | hemolysin expression modulator Hha | - |
| BBD65_RS00815 () | 29180..29674 | - | 495 | WP_077138866.1 | DNA-binding protein | - |
| BBD65_RS00820 () | 29708..30226 | - | 519 | WP_077138889.1 | hypothetical protein | - |
| BBD65_RS00825 () | 30277..30531 | - | 255 | WP_032700773.1 | hypothetical protein | - |
| BBD65_RS00830 () | 30811..33060 | - | 2250 | WP_077138867.1 | hypothetical protein | - |
| BBD65_RS00835 () | 33062..34156 | - | 1095 | WP_077138868.1 | transcriptional regulator | - |
| BBD65_RS00845 () | 34750..34968 | + | 219 | WP_015632547.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BBD65_RS00850 () | 34970..35275 | + | 306 | WP_012539978.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BBD65_RS00855 () | 35462..36466 | + | 1005 | WP_077138869.1 | hypothetical protein | - |
| BBD65_RS00860 () | 36664..37443 | + | 780 | WP_029497485.1 | site-specific integrase | - |
| BBD65_RS00865 () | 37501..37758 | - | 258 | WP_032433931.1 | hypothetical protein | - |
| BBD65_RS30590 () | 37886..37999 | - | 114 | WP_032072094.1 | hypothetical protein | - |
| BBD65_RS00870 () | 38631..39386 | + | 756 | WP_012539983.1 | replication initiation protein RepE | - |
| BBD65_RS00880 () | 40177..41382 | + | 1206 | WP_015632469.1 | AAA family ATPase | - |
| BBD65_RS00885 () | 41382..42356 | + | 975 | WP_032741647.1 | ParB/RepB/Spo0J family partition protein | - |
| BBD65_RS00890 () | 42438..43709 | - | 1272 | WP_077138871.1 | Y-family DNA polymerase | - |
| BBD65_RS00895 () | 43709..44140 | - | 432 | WP_020805749.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BBD65_RS00900 () | 44373..45344 | + | 972 | WP_077138872.1 | StbA family protein | - |
| BBD65_RS00905 () | 45347..46018 | + | 672 | WP_001568039.1 | plasmid partitioning/stability family protein | - |
| BBD65_RS00910 () | 46080..46310 | + | 231 | WP_048322267.1 | hypothetical protein | - |
| BBD65_RS31310 () | 46482..46674 | + | 193 | Protein_47 | hypothetical protein | - |
| BBD65_RS00915 () | 46746..47447 | + | 702 | WP_001568041.1 | DNA methylase | - |
| BBD65_RS00920 () | 47447..47668 | + | 222 | WP_032433933.1 | hypothetical protein | - |
| BBD65_RS00925 () | 47678..48097 | + | 420 | WP_049117709.1 | DUF1380 domain-containing protein | - |
| BBD65_RS00930 () | 48151..48918 | + | 768 | WP_077138873.1 | hypothetical protein | - |
| BBD65_RS00935 () | 48991..49572 | + | 582 | Protein_52 | plasmid SOS inhibition protein A | - |
| BBD65_RS00940 () | 49572..49799 | + | 228 | WP_048334732.1 | hypothetical protein | - |
| BBD65_RS00950 () | 50272..50433 | + | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| BBD65_RS00955 () | 50744..52156 | - | 1413 | WP_060598838.1 | amino acid permease | - |
| BBD65_RS00960 () | 52703..53605 | - | 903 | WP_060598839.1 | LysR family transcriptional regulator | - |
| BBD65_RS00965 () | 53888..55027 | + | 1140 | WP_072122725.1 | PLP-dependent aspartate aminotransferase family protein | - |
| BBD65_RS00970 () | 55048..55977 | + | 930 | WP_158236771.1 | DMT family transporter | - |
| BBD65_RS00975 () | 56092..56393 | + | 302 | Protein_59 | DDE-type integrase/transposase/recombinase | - |
| BBD65_RS00980 () | 56695..57006 | + | 312 | WP_023292165.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| BBD65_RS00985 () | 57003..57419 | + | 417 | WP_072122726.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| BBD65_RS00990 () | 58236..58616 | + | 381 | WP_077138875.1 | hypothetical protein | - |
| BBD65_RS00995 () | 58682..59029 | + | 348 | WP_077138876.1 | hypothetical protein | - |
| BBD65_RS01000 () | 59117..59347 | + | 231 | WP_004197732.1 | hypothetical protein | - |
| BBD65_RS01005 () | 59394..60227 | + | 834 | WP_077138877.1 | type I restriction-modification system subunit M | - |
| BBD65_RS01010 () | 60852..61382 | + | 531 | WP_077138878.1 | antirestriction protein | - |
| BBD65_RS01015 () | 61420..61899 | - | 480 | WP_077138879.1 | hypothetical protein | VF |
| BBD65_RS01020 () | 62321..62719 | + | 399 | WP_077138880.1 | relaxosome protein TraM | - |
| BBD65_RS01025 () | 62892..63578 | + | 687 | WP_077138881.1 | transcriptional regulator TraJ family protein | - |
| BBD65_RS01030 () | 63657..64043 | + | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| BBD65_RS01035 () | 64097..64465 | + | 369 | WP_049155512.1 | type IV conjugative transfer system pilin TraA | - |
| BBD65_RS01040 () | 64479..64784 | + | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| BBD65_RS01045 () | 64804..65370 | + | 567 | WP_004194424.1 | type IV conjugative transfer system protein TraE | - |
| BBD65_RS01050 () | 65357..66097 | + | 741 | WP_060598874.1 | type-F conjugative transfer system secretin TraK | - |
| BBD65_RS01055 () | 66097..67521 | + | 1425 | WP_060598873.1 | conjugal transfer protein TraB | - |
| BBD65_RS01060 () | 67514..68110 | + | 597 | WP_060598872.1 | conjugal transfer protein TraP | - |
| BBD65_RS01065 () | 68133..68717 | + | 585 | WP_060598871.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BBD65_RS01070 () | 68849..69259 | + | 411 | WP_060598870.1 | hypothetical protein | - |
| BBD65_RS01075 () | 69264..69548 | + | 285 | WP_060598886.1 | hypothetical protein | - |
| BBD65_RS01080 () | 69572..69796 | + | 225 | WP_060598869.1 | hypothetical protein | - |
| BBD65_RS01085 () | 69789..70100 | + | 312 | WP_077138882.1 | hypothetical protein | - |
| BBD65_RS01090 () | 70167..70571 | + | 405 | WP_060598867.1 | hypothetical protein | - |
| BBD65_RS01095 () | 70653..70937 | + | 285 | WP_101417384.1 | hypothetical protein | - |
| BBD65_RS01100 () | 70945..71343 | + | 399 | WP_072198239.1 | hypothetical protein | - |
| BBD65_RS01105 () | 71415..74054 | + | 2640 | WP_060598865.1 | type IV secretion system protein TraC | - |
| BBD65_RS01110 () | 74054..74443 | + | 390 | WP_020803372.1 | type-F conjugative transfer system protein TrbI | - |
| BBD65_RS01115 () | 74443..75069 | + | 627 | WP_020314628.1 | type-F conjugative transfer system protein TraW | - |
| BBD65_RS01120 () | 75080..76072 | + | 993 | WP_020323530.1 | conjugal transfer pilus assembly protein TraU | - |
| BBD65_RS01125 () | 76087..76635 | + | 549 | WP_022631518.1 | hypothetical protein | - |
| BBD65_RS01130 () | 76610..77299 | - | 690 | WP_032427592.1 | hypothetical protein | - |
| BBD65_RS01135 () | 77356..77958 | + | 603 | WP_077138883.1 | hypothetical protein | - |
| BBD65_RS01140 () | 78103..78750 | + | 648 | WP_039698503.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BBD65_RS01145 () | 78809..80764 | + | 1956 | WP_060598862.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BBD65_RS01150 () | 80797..81078 | + | 282 | WP_022644736.1 | hypothetical protein | - |
| BBD65_RS01155 () | 81068..81295 | + | 228 | WP_012540032.1 | conjugal transfer protein TrbE | - |
| BBD65_RS01160 () | 81306..81632 | + | 327 | WP_012539967.1 | hypothetical protein | - |
| BBD65_RS01165 () | 81653..82405 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BBD65_RS01170 () | 82416..82655 | + | 240 | WP_023340931.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BBD65_RS01175 () | 82627..83184 | + | 558 | WP_032433944.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BBD65_RS01180 () | 83230..83673 | + | 444 | WP_040172400.1 | F-type conjugal transfer protein TrbF | - |
| BBD65_RS01185 () | 83651..85030 | + | 1380 | WP_072198238.1 | conjugal transfer protein TraH | - |
| BBD65_RS01190 () | 85030..87852 | + | 2823 | WP_060598861.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BBD65_RS30065 () | 87876..88478 | + | 603 | WP_048263624.1 | hypothetical protein | - |
| BBD65_RS01200 () | 88729..89460 | + | 732 | WP_016831056.1 | complement resistance protein TraT | - |
| BBD65_RS01205 () | 89820..92120 | + | 2301 | Protein_105 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|