MGE detailed information
MGE type: Prophage MGE length: 50978 bp
Accession: NZ_CP017048 Location: 798699..849676 Organism: Burkholderia pseudomallei strain MSHR5864 Replicon: chromosome
Accession: NZ_CP017048 Location: 798699..849676 Organism: Burkholderia pseudomallei strain MSHR5864 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGI52_RS04260 () | 794542..795423 | - | 882 | WP_004203894.1 | succinate--CoA ligase subunit alpha | - |
| BGI52_RS04265 () | 795567..796733 | - | 1167 | WP_004189251.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BGI52_RS04270 () | 796813..797424 | - | 612 | WP_004526209.1 | DUF2889 domain-containing protein | - |
| BGI52_RS04275 () | 797716..798699 | - | 984 | WP_004198682.1 | recombination regulator RecX | - |
| BGI52_RS04280 () | 798699..799769 | - | 1071 | WP_004189458.1 | recombinase RecA | - |
| BGI52_RS04285 () | 799973..800716 | + | 744 | WP_004526208.1 | hypothetical protein | VF |
| BGI52_RS04290 () | 800740..802296 | + | 1557 | WP_038759789.1 | sensor histidine kinase N-terminal domain-containing protein | - |
| BGI52_RS04295 () | 802519..804177 | + | 1659 | WP_004526206.1 | MHS family MFS transporter | - |
| BGI52_RS38950 () | 805004..805195 | + | 192 | WP_143299399.1 | hypothetical protein | - |
| BGI52_RS04305 () | 805179..806231 | + | 1053 | WP_080306375.1 | hypothetical protein | - |
| BGI52_RS04310 () | 806909..807205 | + | 297 | WP_006027262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BGI52_RS04315 () | 807208..807564 | + | 357 | WP_004202809.1 | putative addiction module antidote protein | Antitoxin Detail |
| BGI52_RS04320 () | 807608..808663 | - | 1056 | WP_089504313.1 | phage portal protein | - |
| BGI52_RS04325 () | 808660..810429 | - | 1770 | WP_076848416.1 | terminase ATPase subunit family protein | - |
| BGI52_RS04330 () | 810573..811382 | + | 810 | WP_076848417.1 | GPO family capsid scaffolding protein | - |
| BGI52_RS04335 () | 811416..812429 | + | 1014 | WP_076848418.1 | phage major capsid protein, P2 family | - |
| BGI52_RS04340 () | 812426..813115 | + | 690 | WP_076848419.1 | terminase endonuclease subunit | - |
| BGI52_RS04345 () | 813215..813694 | + | 480 | WP_076848420.1 | head completion/stabilization protein | - |
| BGI52_RS04350 () | 813694..813945 | + | 252 | WP_004524437.1 | hypothetical protein | - |
| BGI52_RS04355 () | 813942..814148 | + | 207 | WP_004524438.1 | tail protein X | - |
| BGI52_RS04360 () | 814163..814507 | + | 345 | WP_076848421.1 | hypothetical protein | - |
| BGI52_RS04365 () | 814509..814781 | + | 273 | WP_004524440.1 | phage holin family protein | - |
| BGI52_RS04370 () | 814778..815590 | + | 813 | WP_038758945.1 | N-acetylmuramidase family protein | - |
| BGI52_RS04375 () | 815587..816027 | + | 441 | WP_038762252.1 | Rz-like lysis system protein LysB | - |
| BGI52_RS04385 () | 816132..816548 | + | 417 | WP_004524444.1 | phage tail protein | - |
| BGI52_RS04390 () | 816545..817012 | + | 468 | WP_011204760.1 | phage virion morphogenesis protein | - |
| BGI52_RS04400 () | 817412..818170 | - | 759 | WP_076848423.1 | site-specific DNA-methyltransferase | - |
| BGI52_RS04410 () | 818344..819024 | + | 681 | WP_038726656.1 | phage baseplate assembly protein V | - |
| BGI52_RS04415 () | 819021..819383 | + | 363 | WP_038740396.1 | GPW/gp25 family protein | - |
| BGI52_RS04420 () | 819380..820285 | + | 906 | WP_076848424.1 | baseplate assembly protein | - |
| BGI52_RS04425 () | 820278..820832 | + | 555 | WP_038738775.1 | phage tail protein I | - |
| BGI52_RS04430 () | 820843..823206 | + | 2364 | WP_161955355.1 | phage tail protein | - |
| BGI52_RS04435 () | 823223..823894 | + | 672 | WP_076848426.1 | tail fiber assembly protein | - |
| BGI52_RS04440 () | 823950..825122 | + | 1173 | WP_004531063.1 | phage tail sheath protein | - |
| BGI52_RS04445 () | 825138..825647 | + | 510 | WP_004524455.1 | phage major tail tube protein | - |
| BGI52_RS04450 () | 825705..826049 | + | 345 | WP_004531064.1 | phage tail assembly protein | - |
| BGI52_RS04455 () | 826058..826171 | + | 114 | WP_004552648.1 | GpE family phage tail protein | - |
| BGI52_RS04460 () | 826174..829134 | + | 2961 | WP_161955306.1 | hypothetical protein | - |
| BGI52_RS04465 () | 829152..829577 | + | 426 | WP_038796059.1 | phage tail protein | - |
| BGI52_RS04470 () | 829577..830674 | + | 1098 | WP_076848428.1 | phage late control D family protein | - |
| BGI52_RS04475 () | 830682..831581 | - | 900 | WP_076848429.1 | hypothetical protein | - |
| BGI52_RS04480 () | 831621..832364 | - | 744 | WP_004551084.1 | hypothetical protein | - |
| BGI52_RS04485 () | 832414..832845 | - | 432 | WP_076848430.1 | helix-turn-helix domain-containing protein | - |
| BGI52_RS04490 () | 832928..833164 | + | 237 | WP_004534406.1 | hypothetical protein | - |
| BGI52_RS04495 () | 833168..833464 | + | 297 | WP_004534427.1 | hypothetical protein | - |
| BGI52_RS04500 () | 833452..833700 | + | 249 | WP_004551085.1 | ogr/Delta-like zinc finger family protein | - |
| BGI52_RS04505 () | 833785..834003 | + | 219 | WP_004551086.1 | hypothetical protein | - |
| BGI52_RS04510 () | 834009..834206 | + | 198 | WP_038738765.1 | hypothetical protein | - |
| BGI52_RS04515 () | 834250..834444 | + | 195 | WP_004524467.1 | hypothetical protein | - |
| BGI52_RS04520 () | 834448..834687 | + | 240 | WP_004531069.1 | hypothetical protein | - |
| BGI52_RS04525 () | 834856..835062 | + | 207 | WP_004524469.1 | hypothetical protein | - |
| BGI52_RS04530 () | 835065..835424 | + | 360 | WP_004531070.1 | hypothetical protein | - |
| BGI52_RS04535 () | 835421..835675 | + | 255 | WP_004524471.1 | hypothetical protein | - |
| BGI52_RS04540 () | 835687..838479 | + | 2793 | WP_014696839.1 | toprim domain-containing protein | - |
| BGI52_RS04545 () | 838476..839042 | + | 567 | WP_076848431.1 | Baseplate J family protein | - |
| BGI52_RS04550 () | 839129..839485 | + | 357 | WP_143299350.1 | DUF4224 domain-containing protein | - |
| BGI52_RS04555 () | 839486..840565 | + | 1080 | WP_080498198.1 | hypothetical protein ; Integrase | Integrase |
| BGI52_RS38955 () | 841185..841394 | - | 210 | WP_128972375.1 | hypothetical protein | - |
| BGI52_RS04560 () | 842914..843663 | + | 750 | WP_004522722.1 | hypothetical protein | - |
| BGI52_RS04565 () | 843826..845172 | + | 1347 | WP_076848432.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| BGI52_RS04570 () | 845238..845630 | + | 393 | WP_004522724.1 | hypothetical protein | VF |
| BGI52_RS04580 () | 845894..846979 | - | 1086 | WP_004522725.1 | mandelate racemase | - |
| BGI52_RS04585 () | 847055..848011 | - | 957 | WP_051430370.1 | DMT family transporter | - |
| BGI52_RS04590 () | 848127..848648 | - | 522 | WP_004522727.1 | lipocalin-like domain-containing protein | - |
| BGI52_RS04595 () | 848801..849676 | + | 876 | WP_004522729.1 | hypothetical protein | VF |
| BGI52_RS04600 () | 849700..850911 | - | 1212 | WP_004522730.1 | NADP-dependent malic enzyme | - |
| BGI52_RS04605 () | 850915..852228 | - | 1314 | WP_004522731.1 | ATP-grasp domain-containing protein | - |
| BGI52_RS04610 () | 852225..853322 | - | 1098 | WP_038744972.1 | DUF1611 domain-containing protein | - |
| BGI52_RS04615 () | 853360..854595 | - | 1236 | WP_038725878.1 | ATP-grasp domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|