MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_CP016625 Location: 5680387..5699107 Organism: Escherichia coli O157:H7 strain FRIK944 Replicon: chromosome
Accession: NZ_CP016625 Location: 5680387..5699107 Organism: Escherichia coli O157:H7 strain FRIK944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9L45_RS29315 () | 5675535..5676713 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| A9L45_RS29320 () | 5676781..5677623 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| A9L45_RS29325 () | 5677889..5680075 | - | 2187 | WP_000535053.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| A9L45_RS29330 () | 5680387..5680653 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A9L45_RS29335 () | 5680650..5681417 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| A9L45_RS29340 () | 5681427..5682578 | - | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A9L45_RS29345 () | 5682694..5683965 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A9L45_RS29350 () | 5684006..5685238 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A9L45_RS29355 () | 5685705..5686457 | + | 753 | Protein_5588 | Recombination-promoting nuclease RpnD | VF |
| A9L45_RS35555 () | 5686462..5686662 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| A9L45_RS29360 () | 5686905..5688317 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A9L45_RS29365 () | 5688494..5688658 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A9L45_RS29370 () | 5688755..5689636 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A9L45_RS32930 () | 5689684..5690847 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A9L45_RS29380 () | 5690894..5691235 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5691230..5691306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| A9L45_RS29385 () | 5691456..5693210 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| A9L45_RS29390 () | 5693210..5694679 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A9L45_RS29395 () | 5694746..5697178 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A9L45_RS29400 () | 5697456..5697740 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A9L45_RS29405 () | 5697749..5699107 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A9L45_RS29410 () | 5699176..5700132 | - | 957 | WP_001297640.1 | GTPase | - |
| A9L45_RS29415 () | 5700143..5700346 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A9L45_RS29420 () | 5700396..5702546 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A9L45_RS29430 () | 5702839..5703381 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |