MGE detailed information
MGE type: Conjugative plasmid MGE length: 35269 bp
Accession: NZ_CP016609 Location: 1..35269 Organism: Xylella fastidiosa strain Salento-1 Replicon: plasmid pSal1
Accession: NZ_CP016609 Location: 1..35269 Organism: Xylella fastidiosa strain Salento-1 Replicon: plasmid pSal1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV75_RS12460 | 7..1407 | + | 1401 | WP_046417521.1 | TrbI/VirB10 family protein | - |
| BCV75_RS11955 (BCV75_11205) | 1426..2211 | + | 786 | WP_046417519.1 | P-type conjugative transfer protein TrbJ | - |
| BCV75_RS12465 (BCV75_11210) | 2224..2538 | + | 315 | WP_155561293.1 | EexN family lipoprotein | - |
| BCV75_RS11965 (BCV75_11215) | 2544..3941 | + | 1398 | WP_046417516.1 | P-type conjugative transfer protein TrbL | - |
| BCV75_RS11970 | 3947..4681 | + | 735 | WP_232755968.1 | hypothetical protein | VF |
| BCV75_RS11975 (BCV75_11220) | 4577..5056 | - | 480 | Protein_6 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BCV75_RS11980 (BCV75_11225) | 5046..5300 | + | 255 | WP_230950296.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BCV75_RS12470 | 5302..5475 | + | 174 | WP_155641416.1 | hypothetical protein | - |
| BCV75_RS11985 (BCV75_11230) | 5850..6176 | - | 327 | WP_004091396.1 | DNA-binding protein | - |
| BCV75_RS11990 (BCV75_11235) | 6306..6626 | - | 321 | WP_046417511.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BCV75_RS11995 | 6763..6849 | - | 87 | Protein_11 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BCV75_RS12000 (BCV75_11240) | 7044..7286 | + | 243 | WP_004085758.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BCV75_RS12005 (BCV75_11245) | 7279..7566 | + | 288 | WP_004085905.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BCV75_RS12010 (BCV75_11250) | 7654..8211 | + | 558 | WP_046417502.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| BCV75_RS12015 | 8398..12513 | - | 4116 | WP_046417500.1 | zincin-like metallopeptidase domain-containing protein | - |
| BCV75_RS12020 (BCV75_11260) | 12519..12881 | - | 363 | WP_046417499.1 | hypothetical protein | - |
| BCV75_RS12025 (BCV75_11265) | 12884..14941 | - | 2058 | WP_046417497.1 | DNA topoisomerase 3 | - |
| BCV75_RS12030 (BCV75_11270) | 14970..15506 | - | 537 | WP_046417495.1 | conjugative transfer signal peptidase TraF | - |
| BCV75_RS12035 (BCV75_11275) | 15503..17437 | - | 1935 | WP_046417494.1 | type IV secretory system conjugative DNA transfer family protein | - |
| BCV75_RS12040 (BCV75_11280) | 17434..19926 | - | 2493 | WP_046417493.1 | Protein TraI | Relaxase |
| BCV75_RS12045 (BCV75_11285) | 19961..20314 | - | 354 | WP_046417491.1 | conjugal transfer transcriptional regulator TraJ | - |
| BCV75_RS12050 (BCV75_11290) | 20528..20917 | + | 390 | WP_046417489.1 | TraK family protein | - |
| BCV75_RS12055 (BCV75_11295) | 20917..21642 | + | 726 | WP_046417487.1 | AAA family ATPase | - |
| BCV75_RS12060 (BCV75_11300) | 21648..22094 | + | 447 | WP_230950297.1 | conjugal transfer protein TraM | - |
| BCV75_RS12065 (BCV75_11305) | 22156..22752 | - | 597 | WP_046417484.1 | hypothetical protein | - |
| BCV75_RS12070 (BCV75_11310) | 22779..23132 | - | 354 | WP_004091455.1 | hypothetical protein | - |
| BCV75_RS12075 (BCV75_11315) | 23230..24249 | - | 1020 | WP_171817035.1 | ParB/RepB/Spo0J family partition protein | - |
| BCV75_RS12080 (BCV75_11320) | 24258..25021 | - | 764 | Protein_28 | ParA family protein | - |
| BCV75_RS12085 (BCV75_11325) | 25018..25323 | - | 306 | WP_046417543.1 | transcriptional regulator KorA | - |
| BCV75_RS12090 (BCV75_11330) | 25519..25839 | - | 321 | WP_046417474.1 | KleE stable inheritance protein | - |
| BCV75_RS12095 (BCV75_11335) | 26555..27466 | - | 912 | WP_004091489.1 | replication protein RepA | - |
| BCV75_RS12100 (BCV75_11340) | 27510..27857 | - | 348 | WP_050812600.1 | hypothetical protein | - |
| BCV75_RS12105 (BCV75_11345) | 27901..28260 | - | 360 | WP_004091494.1 | single-stranded DNA-binding protein | - |
| BCV75_RS12110 (BCV75_11350) | 28378..28734 | + | 357 | WP_012382841.1 | transcriptional regulator | - |
| BCV75_RS12115 (BCV75_11355) | 28932..29891 | + | 960 | WP_046417547.1 | Putative conjugal transfer protein | VF |
| BCV75_RS12120 (BCV75_11360) | 29904..30296 | + | 393 | WP_046417535.1 | TrbC/VirB2 family protein | - |
| BCV75_RS12125 (BCV75_11365) | 30299..30619 | + | 321 | WP_046417532.1 | conjugal transfer protein TrbD | - |
| BCV75_RS12130 (BCV75_11370) | 30607..33171 | + | 2565 | WP_046417530.1 | conjugal transfer protein TrbE | - |
| BCV75_RS12135 (BCV75_11375) | 33168..33884 | + | 717 | WP_046417528.1 | conjugal transfer protein TrbF | - |
| BCV75_RS12140 (BCV75_11380) | 33901..34791 | + | 891 | WP_046417527.1 | P-type conjugative transfer protein TrbG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|