MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93855 bp
Accession: NZ_CP016390 Location: 1..93855 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ST931R Replicon: plasmid pSLT931
Accession: NZ_CP016390 Location: 1..93855 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ST931R Replicon: plasmid pSLT931
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBC45_RS24760 () | 94..378 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| BBC45_RS24765 () | 391..546 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| BBC45_RS24770 () | 712..1154 | + | 443 | Protein_2 | phospholipase | - |
| BBC45_RS24775 () | 1333..1599 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| BBC45_RS24785 () | 1849..1926 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| BBC45_RS24790 () | 1907..2788 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| BBC45_RS24795 () | 3648..3869 | + | 222 | WP_032492623.1 | SdiA-regulated domain-containing protein | - |
| BBC45_RS24800 () | 3966..4724 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| BBC45_RS24805 () | 4991..5548 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| BBC45_RS24810 () | 5638..6537 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| BBC45_RS27955 () | 6534..6680 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| BBC45_RS24815 () | 6670..7323 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| BBC45_RS24820 () | 7568..7918 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| BBC45_RS24825 () | 7903..8115 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| BBC45_RS24830 () | 8547..9422 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| BBC45_RS24835 () | 9675..10232 | - | 558 | WP_010999940.1 | membrane protein | - |
| BBC45_RS24840 () | 10247..10939 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| BBC45_RS24845 () | 10932..13340 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| BBC45_RS24850 () | 13568..14086 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| BBC45_RS24855 () | 14361..14663 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| BBC45_RS24860 () | 15382..15763 | + | 382 | Protein_20 | YgiW/YdeI family stress tolerance OB fold protein | - |
| BBC45_RS27960 () | 15932..16376 | + | 445 | Protein_21 | site-specific integrase | - |
| BBC45_RS24870 () | 16635..17624 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| BBC45_RS27620 () | 18118..18414 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| BBC45_RS24880 () | 18898..19419 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| BBC45_RS24885 () | 20095..20313 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BBC45_RS24890 () | 20315..20620 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BBC45_RS24895 () | 20622..20912 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| BBC45_RS24900 () | 20909..21430 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| BBC45_RS24905 () | 21465..22247 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| BBC45_RS24910 () | 22256..22969 | + | 714 | Protein_30 | EAL domain-containing protein | - |
| BBC45_RS24915 () | 22973..23482 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| BBC45_RS24920 () | 23476..23961 | + | 486 | WP_000905606.1 | membrane protein | - |
| BBC45_RS27965 () | 24238..24525 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| BBC45_RS24930 () | 24681..25241 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| BBC45_RS24935 () | 25308..25658 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| BBC45_RS27075 () | 25715..26139 | + | 425 | Protein_36 | IS200/IS605 family transposase | - |
| BBC45_RS24945 () | 26266..26916 | - | 651 | WP_058800790.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| BBC45_RS24950 () | 27177..27902 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| BBC45_RS24955 () | 28183..29958 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| BBC45_RS28105 () | 30010..30177 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| BBC45_RS24960 () | 30140..30907 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| BBC45_RS24965 () | 31081..31245 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| BBC45_RS24970 () | 31419..32312 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| BBC45_RS24975 () | 32921..33958 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| BBC45_RS24980 () | 34147..35172 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| BBC45_RS24985 () | 35105..36769 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| BBC45_RS24990 () | 36753..37313 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| BBC45_RS24995 () | 37520..38260 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| BBC45_RS25000 () | 38915..39403 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| BBC45_RS25005 () | 39662..40777 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| BBC45_RS25010 () | 40863..41279 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| BBC45_RS25015 () | 41463..41798 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| BBC45_RS25020 () | 41855..42421 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| BBC45_RS25025 () | 42453..43394 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| BBC45_RS25030 () | 43809..45014 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| BBC45_RS25035 () | 45014..45988 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| BBC45_RS25040 () | 46070..47344 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| BBC45_RS25045 () | 47344..47766 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BBC45_RS27630 () | 48277..48747 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| BBC45_RS25055 () | 48740..49096 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| BBC45_RS25065 () | 49478..50158 | + | 681 | WP_000088645.1 | DNA methylase | - |
| BBC45_RS25070 () | 50158..50379 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| BBC45_RS25075 () | 50435..50848 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| BBC45_RS25080 () | 50920..51684 | + | 765 | WP_001246548.1 | membrane protein | - |
| BBC45_RS25085 () | 52180..52614 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| BBC45_RS25090 () | 52681..53115 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| BBC45_RS25095 () | 53351..53674 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| BBC45_RS28110 () | 53638..53805 | + | 168 | WP_154074060.1 | hypothetical protein | - |
| BBC45_RS25105 () | 54399..54917 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| BBC45_RS25110 () | 54972..55214 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| BBC45_RS25115 () | 55283..57280 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| BBC45_RS25120 () | 57320..57754 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| BBC45_RS25125 () | 57751..58488 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| BBC45_RS28115 () | 58737..58895 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| BBC45_RS28120 () | 58998..59816 | + | 819 | Protein_75 | DUF945 domain-containing protein | - |
| BBC45_RS25140 () | 60127..60596 | - | 470 | Protein_76 | transglycosylase SLT domain-containing protein | - |
| BBC45_RS25145 () | 61011..61391 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| BBC45_RS25150 () | 61584..62270 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| BBC45_RS27110 () | 62364..62591 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| BBC45_RS25155 () | 62633..62995 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| BBC45_RS25160 () | 63010..63321 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| BBC45_RS25165 () | 63343..63909 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| BBC45_RS25170 () | 63896..64636 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| BBC45_RS25175 () | 64636..66057 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| BBC45_RS25180 () | 66047..66643 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| BBC45_RS25185 () | 66621..66866 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| BBC45_RS25190 () | 66863..67378 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BBC45_RS25195 () | 67513..67734 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| BBC45_RS25200 () | 67727..68194 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| BBC45_RS25205 () | 68311..68574 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| BBC45_RS25210 () | 68590..71238 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| BBC45_RS25215 () | 71213..71599 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| BBC45_RS25220 () | 71596..72228 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| BBC45_RS25225 () | 72225..73217 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| BBC45_RS25230 () | 73236..73544 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| BBC45_RS25235 () | 73529..74167 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BBC45_RS25240 () | 74204..74623 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| BBC45_RS25245 () | 74620..76446 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BBC45_RS25250 () | 76457..76672 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| BBC45_RS25255 () | 76684..77433 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BBC45_RS25260 () | 77647..77940 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BBC45_RS25265 () | 77927..78475 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BBC45_RS25270 () | 78465..79847 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| BBC45_RS25275 () | 79844..82666 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BBC45_RS25280 () | 82682..83176 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| BBC45_RS25285 () | 83212..83943 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| BBC45_RS25290 () | 84320..86482 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| BBC45_RS25295 () | 86491..86889 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | - |
| BBC45_RS25300 () | 86889..87116 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | - |
| BBC45_RS25305 () | 87198..92456 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| BBC45_RS25310 () | 92476..93216 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| BBC45_RS25315 () | 93271..93834 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|