MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_CP015846 Location: 5573559..5592279 Organism: Escherichia coli O157:H7 strain FRIK2069 Replicon: chromosome
Accession: NZ_CP015846 Location: 5573559..5592279 Organism: Escherichia coli O157:H7 strain FRIK2069 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8V30_RS30035 () | 5568707..5569885 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| A8V30_RS30040 () | 5569953..5570795 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| A8V30_RS30045 () | 5571061..5573247 | - | 2187 | WP_000535053.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| A8V30_RS30050 () | 5573559..5573825 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A8V30_RS30055 () | 5573822..5574589 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| A8V30_RS30060 () | 5574599..5575750 | - | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A8V30_RS30065 () | 5575866..5577137 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A8V30_RS30070 () | 5577178..5578410 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A8V30_RS30075 () | 5578877..5579629 | + | 753 | Protein_5454 | Recombination-promoting nuclease RpnD | VF |
| A8V30_RS31870 () | 5579634..5579834 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| A8V30_RS30080 () | 5580077..5581489 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A8V30_RS30090 () | 5581666..5581830 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A8V30_RS30095 () | 5581927..5582808 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A8V30_RS30100 () | 5582856..5584019 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A8V30_RS30105 () | 5584066..5584407 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5584402..5584478 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| A8V30_RS30110 () | 5584628..5586382 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| A8V30_RS30115 () | 5586382..5587851 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A8V30_RS30120 () | 5587918..5590350 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A8V30_RS30125 () | 5590628..5590912 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A8V30_RS30130 () | 5590921..5592279 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A8V30_RS30135 () | 5592348..5593304 | - | 957 | WP_001297640.1 | GTPase | - |
| A8V30_RS30140 () | 5593315..5593518 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A8V30_RS30145 () | 5593568..5595718 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A8V30_RS30155 () | 5596011..5596553 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |