MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP015832 Location: 4811616..4832855 Organism: Escherichia coli O157 strain 180-PT54 Replicon: chromosome
Accession: NZ_CP015832 Location: 4811616..4832855 Organism: Escherichia coli O157 strain 180-PT54 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8L39_RS24785 () | 4807342..4807884 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| A8L39_RS24795 () | 4808177..4810327 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A8L39_RS24800 () | 4810377..4810580 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A8L39_RS24805 () | 4810591..4811547 | + | 957 | WP_001297640.1 | GTPase | - |
| A8L39_RS24810 () | 4811616..4812974 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A8L39_RS24815 () | 4812983..4813267 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A8L39_RS24820 () | 4813545..4815977 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A8L39_RS24825 () | 4816044..4817513 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A8L39_RS24830 () | 4817513..4819267 | + | 1755 | WP_000110094.1 | restriction endonuclease subunit S | - |
| - () | 4819417..4819493 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4819417..4819493 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4819417..4819493 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4819417..4819493 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4819417..4819493 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4819417..4819493 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4819417..4819493 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4819417..4819493 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| A8L39_RS24835 () | 4819488..4819829 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| A8L39_RS31590 () | 4819876..4821039 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A8L39_RS24845 () | 4821087..4821968 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A8L39_RS24850 () | 4822065..4822229 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A8L39_RS24855 () | 4822406..4823818 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A8L39_RS34035 () | 4824061..4824261 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| A8L39_RS24860 () | 4824266..4825018 | - | 753 | Protein_4729 | Recombination-promoting nuclease RpnD | VF |
| A8L39_RS24865 () | 4825485..4826717 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A8L39_RS24870 () | 4826758..4828029 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A8L39_RS24875 () | 4828145..4829296 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A8L39_RS24880 () | 4829306..4830073 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| A8L39_RS24885 () | 4830070..4830336 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A8L39_RS24890 () | 4830648..4832855 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| A8L39_RS24895 () | 4833121..4833963 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| A8L39_RS24900 () | 4834031..4835209 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |