NZ_CP0153861..199497

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 199497 bp
Accession: NZ_CP015386        Location: 1..199497         Organism: Klebsiella pneumoniae strain NY9       Replicon: plasmid pNY9_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
A6P56_RS28145 () 1..1011 + 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
A6P56_RS28155 () 1728..2468 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
A6P56_RS28165 () 3075..4043 + 969 WP_004099053.1 IS5 family transposase IS903B Transposase
A6P56_RS28170 () 4678..5625 + 948 WP_004152065.1 sensor domain-containing diguanylate cyclase -
A6P56_RS28175 () 5652..5963 - 312 WP_071527918.1 EAL domain-containing protein -
A6P56_RS28180 () 5983..6951 + 969 WP_011977741.1 IS5 family transposase IS903B Transposase
A6P56_RS28185 () 7624..7881 - 258 WP_004197688.1 hypothetical protein -
A6P56_RS28190 () 8483..9937 + 1455 WP_020444838.1 putative cyclic di-GMP phosphodiesterase PdeB VF
A6P56_RS28195 () 10920..12197 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
A6P56_RS28200 () 12260..14257 - 1998 WP_004178088.1 choline BCCT transporter BetT -
A6P56_RS28205 () 14409..15106 - 698 Protein_10 IS1 family transposase IS1X2 Transposase
A6P56_RS28225 () 16595..17079 + 485 Protein_12 IS1 family transposase IS1X2 Transposase
A6P56_RS28230 () 17095..17637 + 543 Protein_13 ISL3 family transposase ISKpn25 Transposase
A6P56_RS28235 () 17933..18364 - 432 WP_004178091.1 silver-binding protein SilE -
A6P56_RS28240 () 18615..20090 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
A6P56_RS28245 () 20083..20763 - 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
A6P56_RS28250 () 20953..22338 + 1386 WP_000475512.1 Cation efflux system protein CusC VF
A6P56_RS28255 () 22367..22720 + 354 WP_001246153.1 cation efflux system protein CusF -
A6P56_RS28260 () 22834..24126 + 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
A6P56_RS28265 () 24137..27283 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
A6P56_RS28270 () 27370..27810 + 441 WP_000758228.1 hypothetical protein -
A6P56_RS28275 () 27937..30384 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
A6P56_RS28280 () 30425..30622 + 198 WP_000843497.1 DUF2933 domain-containing protein -
A6P56_RS28285 () 30656..31393 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
A6P56_RS28290 () 31682..32131 - 450 WP_001023257.1 copper resistance protein -
A6P56_RS28295 () 32297..33265 - 969 WP_004099053.1 IS5 family transposase IS903B Transposase
A6P56_RS28300 () 33431..35248 + 1818 WP_000925242.1 multicopper oxidase PcoA -
A6P56_RS28305 () 35254..36144 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
A6P56_RS28310 () 36184..36564 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
A6P56_RS28315 () 36569..37498 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
A6P56_RS28320 () 37553..38233 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
A6P56_RS28325 () 38230..39630 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
A6P56_RS28330 () 39847..40281 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
A6P56_RS28335 () 40513..40692 - 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
A6P56_RS28340 () 40753..42373 - 1621 Protein_35 ISL3 family transposase -
A6P56_RS28345 () 42435..42944 + 510 WP_031944101.1 aquaporin -
A6P56_RS28350 () 42994..43491 - 498 WP_004152091.1 GNAT family N-acetyltransferase -
A6P56_RS28355 () 43823..44149 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
A6P56_RS28360 () 44146..44859 + 714 WP_004152093.1 arsenical resistance protein ArsH -
A6P56_RS28365 () 44868..45413 + 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
A6P56_RS28370 () 45489..45851 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
A6P56_RS28375 () 45876..47626 + 1751 Protein_42 arsenical pump-driving ATPase -
A6P56_RS28380 () 47748..48284 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
A6P56_RS28385 () 48317..48742 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
A6P56_RS28390 () 48755..50044 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
A6P56_RS28395 () 50092..51843 - 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
A6P56_RS28400 () 51861..52223 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
A6P56_RS28405 () 52273..52623 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
A6P56_RS28410 () 52981..53250 + 270 WP_004152102.1 hypothetical protein -
A6P56_RS28415 () 53238..53813 + 576 WP_004152103.1 hypothetical protein -
A6P56_RS28420 () 53844..54338 + 495 WP_004152104.1 DNA-binding protein -
A6P56_RS28425 () 54382..54750 + 369 WP_004152105.1 hypothetical protein -
A6P56_RS28430 () 54784..54987 + 204 WP_004152106.1 hemolysin expression modulator Hha -
A6P56_RS28435 () 55036..55293 + 258 WP_004152107.1 hypothetical protein -
A6P56_RS28440 () 55369..55623 + 255 WP_004152108.1 hypothetical protein -
A6P56_RS28445 () 55799..56065 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
A6P56_RS28450 () 56053..56535 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
A6P56_RS28455 () 56747..58093 + 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
A6P56_RS32715 () 58594..59848 - 1255 Protein_59 IS3 family transposase ISKpn38 Transposase
A6P56_RS28470 () 59936..60898 - 963 WP_004152113.1 M48 family metalloprotease -
A6P56_RS28475 () 60885..61634 - 750 WP_009483782.1 phosphate-starvation-inducible PsiE family protein -
A6P56_RS28485 () 61872..62069 - 198 WP_004152115.1 hypothetical protein -
A6P56_RS28490 () 62069..64864 - 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
A6P56_RS28495 () 64979..65548 - 570 WP_004152117.1 Spore protein SP21 VF
A6P56_RS28500 () 65583..65864 - 282 WP_004152118.1 helix-turn-helix domain-containing protein -
A6P56_RS34055 () 66108..66371 - 264 WP_004118208.1 hypothetical protein -
A6P56_RS34060 () 66386..66649 + 264 WP_004118209.1 transposase -
A6P56_RS32725 () 66594..66710 + 117 Protein_68 transposase domain-containing protein -
A6P56_RS28515 () 66895..67592 + 698 Protein_69 IS1 family transposase IS1X2 Transposase
A6P56_RS28520 () 67851..68831 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
A6P56_RS28535 () 69413..69932 - 520 Protein_71 IS5 family transposase ISPst7 Transposase
A6P56_RS28540 () 70040..70909 - 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
A6P56_RS28545 () 70903..71913 - 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
A6P56_RS28550 () 71922..72749 - 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
A6P56_RS28555 () 72758..73621 - 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
A6P56_RS28560 () 73618..74445 - 828 WP_004153729.1 Glutamine transport ATP-binding protein GlnQ VF
A6P56_RS28565 () 74787..75095 + 309 Protein_77 IS5 family transposase ISThi1 Transposase
A6P56_RS28570 () 75301..76005 - 705 WP_004217321.1 IS6 family transposase IS26 Transposase
A6P56_RS28575 () 76068..77261 + 1194 Protein_79 Tn3 family transposase TnpA_ISSba14 Transposase
A6P56_RS28580 () 77309..77977 + 669 WP_044117068.1 IS6 family transposase IS26 Transposase
A6P56_RS28590 () 78167..78982 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
A6P56_RS28595 () 79133..79837 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
A6P56_RS28600 () 79959..80864 + 906 WP_000219391.1 hypothetical protein ARG
A6P56_RS28605 () 80861..82099 + 1239 WP_000004159.1 MFS transporter -
A6P56_RS28610 () 82099..82683 + 585 WP_001137892.1 TetR family transcriptional regulator -
A6P56_RS28620 () 83176..83940 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
A6P56_RS34065 () 84058..84123 - 66 Protein_87 EAL domain-containing protein -
A6P56_RS28635 () 84167..84472 - 306 WP_000130000.1 hypothetical protein Relaxase
A6P56_RS28640 () 84483..85688 - 1206 WP_000184001.1 chromate efflux transporter -
A6P56_RS28645 () 85844..86047 - 204 WP_000376616.1 hypothetical protein -
A6P56_RS28655 () 86175..87014 - 840 WP_000259031.1 Dihydropteroate synthase ARG
A6P56_RS28660 () 87008..87355 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
A6P56_RS28665 () 87519..88310 - 792 WP_001206356.1 Streptomycin 3''-adenylyltransferase ARG
A6P56_RS32745 () 88316..88606 - 291 WP_001336345.1 DUF1010 domain-containing protein -
A6P56_RS28680 () 88718..89215 - 498 WP_001083725.1 Dihydrofolate reductase ARG
A6P56_RS28685 () 89360..90373 + 1014 WP_000845039.1 IS91 family transposase ISAzo26 Transposase
A6P56_RS28695 () 90675..91379 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
A6P56_RS28705 () 91429..92906 + 1478 Protein_98 IS66 family transposase ISSgsp1 Transposase
A6P56_RS28710 () 92944..93321 + 378 Protein_99 IS66 family transposase ISEc22 Transposase
A6P56_RS28715 () 95142..96875 - 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
A6P56_RS28720 () 96883..97830 - 948 WP_004118225.1 acetamidase/formamidase family protein -
A6P56_RS28725 () 97875..99479 - 1605 WP_004152278.1 ABC transporter substrate-binding protein -
A6P56_RS28730 () 99492..100412 - 921 WP_004118227.1 ABC transporter permease -
A6P56_RS28735 () 100412..101260 - 849 WP_004152279.1 ABC transporter permease -
A6P56_RS28740 () 101257..101850 - 594 WP_004118229.1 ANTAR domain-containing protein -
A6P56_RS28745 () 101847..102974 - 1128 WP_004118840.1 transporter substrate-binding protein -
A6P56_RS28750 () 103259..103426 - 168 WP_004118231.1 integrase -
A6P56_RS34070 () 103355..103567 + 213 WP_161989521.1 hypothetical protein -
A6P56_RS28755 () 103568..104053 + 486 Protein_109 IS21 family transposase ISEc62 Transposase
A6P56_RS28760 () 104529..105050 + 522 WP_004118235.1 putative RNA polymerase sigma factor FecI VF
A6P56_RS28765 () 105047..106000 + 954 WP_004118237.1 fec operon regulator FecR -
A6P56_RS28770 () 106086..108410 + 2325 WP_004152280.1 Fe(3+) dicitrate transport protein FecA -
A6P56_RS28775 () 108455..109357 + 903 WP_004118241.1 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB -
A6P56_RS28780 () 109354..110352 + 999 WP_004118243.1 Fe(3+) dicitrate transport system permease protein FecC VF
A6P56_RS28785 () 110349..111305 + 957 WP_004152281.1 Fe(3+) dicitrate transport system permease protein FecD VF
A6P56_RS28790 () 111306..112073 + 768 WP_004152282.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
A6P56_RS28795 () 112172..112465 + 294 WP_004118251.1 IS66 family transposase ISKpn24 Transposase
A6P56_RS28800 () 112540..112767 + 228 Protein_118 IS66 family transposase -
A6P56_RS28805 () 112796..113083 - 288 WP_165765869.1 EAL domain-containing protein -
A6P56_RS28810 () 113417..114427 - 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
A6P56_RS28820 () 114888..115970 + 1083 WP_004152286.1 DNA-binding transcriptional repressor LacI -
A6P56_RS28825 () 116092..119166 + 3075 WP_004152287.1 beta-galactosidase -
A6P56_RS28830 () 119218..120471 + 1254 WP_003846917.1 lactose permease -
A6P56_RS28835 () 120563..121532 + 970 Protein_124 IS5 family transposase IS903B Transposase
A6P56_RS28840 () 122177..124486 + 2310 WP_004152290.1 TerB N-terminal domain-containing protein -
A6P56_RS28845 () 124490..125806 + 1317 WP_004152291.1 ATP-binding protein -
A6P56_RS28850 () 125803..127998 + 2196 WP_000093087.1 DEAD/DEAH box helicase -
A6P56_RS28870 () 129445..130302 - 858 WP_004152292.1 incFII family plasmid replication initiator RepA -
A6P56_RS28875 () 130295..130372 - 78 WP_004171457.1 RepA leader peptide Tap -
A6P56_RS28880 () 130589..130867 - 279 WP_004199332.1 replication regulatory protein RepA -
A6P56_RS28885 () 131188..131667 - 480 WP_009485932.1 Phospholipase D VF
A6P56_RS28895 () 132008..132286 - 279 WP_004152296.1 bacteriocin immunity protein -
A6P56_RS28900 () 132288..134609 - 2322 WP_004178051.1 klebicin B-related nuclease bacteriocin -
A6P56_RS28910 () 134966..135511 + 546 WP_004178052.1 hypothetical protein -
A6P56_RS28915 () 135726..136073 - 348 WP_004152301.1 hypothetical protein -
A6P56_RS28920 () 136093..136689 - 597 WP_004178053.1 fertility inhibition protein FinO -
A6P56_RS28925 () 136847..137572 - 726 WP_004152303.1 type-F conjugative transfer system pilin acetylase TraX -
A6P56_RS28930 () 137652..142913 - 5262 WP_004153029.1 Multifunctional conjugation protein TraI Relaxase
A6P56_RS28935 () 142913..145222 - 2310 Protein_139 type IV conjugative transfer system coupling protein TraD -
A6P56_RS28940 () 145582..146313 - 732 WP_004152629.1 complement resistance protein TraT -
A6P56_RS28945 () 146709..147032 - 324 WP_162780155.1 hypothetical protein -
A6P56_RS28950 () 147035..149884 - 2850 WP_004178054.1 conjugal transfer mating pair stabilization protein TraG -
A6P56_RS28955 () 149884..151254 - 1371 WP_004178055.1 conjugal transfer protein TraH -
A6P56_RS28960 () 151241..151669 - 429 WP_004152689.1 hypothetical protein -
A6P56_RS28965 () 151662..152234 - 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
A6P56_RS28970 () 152206..152445 - 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
A6P56_RS28975 () 152456..153208 - 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
A6P56_RS28980 () 153229..153555 - 327 WP_004152685.1 hypothetical protein -
A6P56_RS28990 () 153783..154019 - 237 WP_004152683.1 conjugal transfer protein TrbE -
A6P56_RS28995 () 154051..156006 - 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
A6P56_RS29000 () 156054..156692 - 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
A6P56_RS29005 () 156705..157697 - 993 WP_004178057.1 conjugal transfer pilus assembly protein TraU -
A6P56_RS29010 () 157708..158334 - 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
A6P56_RS29015 () 158334..158723 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
A6P56_RS29020 () 158723..161362 - 2640 WP_004152592.1 type IV secretion system protein TraC -
A6P56_RS29025 () 161434..161832 - 399 WP_004153071.1 hypothetical protein -
A6P56_RS29035 () 162128..162532 - 405 WP_004152594.1 hypothetical protein -
A6P56_RS29040 () 162599..162916 - 318 WP_004152595.1 hypothetical protein -
A6P56_RS29045 () 162917..163135 - 219 WP_004171484.1 hypothetical protein -
A6P56_RS29050 () 163159..163449 - 291 WP_004152596.1 hypothetical protein -
A6P56_RS29055 () 163454..163864 - 411 WP_004152597.1 lipase chaperone -
A6P56_RS29060 () 163996..164565 - 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
A6P56_RS29065 () 164588..165184 - 597 WP_004152599.1 conjugal transfer protein TraP -
A6P56_RS29070 () 165177..166601 - 1425 WP_004152600.1 conjugal transfer protein TraB -
A6P56_RS29075 () 166601..167341 - 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
A6P56_RS29080 () 167328..167894 - 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
A6P56_RS29085 () 167914..168219 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
A6P56_RS29090 () 168233..168601 - 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
A6P56_RS29095 () 168655..169026 - 372 WP_004208838.1 TraY domain-containing protein -
A6P56_RS29100 () 169110..169796 - 687 WP_011977735.1 transcriptional regulator TraJ family protein -
A6P56_RS29105 () 170019..170411 - 393 WP_004178062.1 relaxosome protein TraM -
A6P56_RS29110 () 170845..171330 + 486 WP_004178063.1 hypothetical protein VF
A6P56_RS29115 () 171363..171692 - 330 WP_011977736.1 hypothetical protein -
A6P56_RS29120 () 171725..172546 - 822 WP_004178064.1 DUF945 domain-containing protein -
A6P56_RS29140 () 173380..173793 - 414 WP_004152722.1 helix-turn-helix domain-containing protein -
A6P56_RS29145 () 173794..174072 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
A6P56_RS29150 () 174062..174382 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
A6P56_RS29155 () 174463..174687 - 225 WP_004152719.1 hypothetical protein -
A6P56_RS29160 () 174698..174910 - 213 WP_004152718.1 hypothetical protein -
A6P56_RS29165 () 174971..175327 - 357 WP_004152717.1 hypothetical protein -
A6P56_RS29180 () 175963..176313 - 351 WP_004152758.1 hypothetical protein -
A6P56_RS29185 () 176310..176582 - 273 WP_004152759.1 hypothetical protein -
A6P56_RS29200 () 177282..177443 - 162 WP_004118124.1 type I toxin-antitoxin system Hok family toxin -
A6P56_RS29205 () 177515..178594 + 1080 WP_004220208.1 IS481 family transposase ISKpn28 Transposase
A6P56_RS29215 () 178772..179146 - 375 WP_004152638.1 hypothetical protein -
A6P56_RS29220 () 179202..179528 - 327 WP_004152639.1 hypothetical protein -
A6P56_RS29225 () 179525..180253 - 729 WP_004152640.1 plasmid SOS inhibition protein A -
A6P56_RS29230 () 180250..180681 - 432 WP_004152641.1 conjugation system SOS inhibitor PsiB -
A6P56_RS29235 () 180748..182784 - 2037 WP_004178066.1 ParB/RepB/Spo0J family partition protein -
A6P56_RS29240 () 182854..183102 - 249 WP_004152643.1 DUF905 domain-containing protein -
A6P56_RS29245 () 183151..183693 - 543 WP_075995128.1 single-stranded DNA-binding protein -
A6P56_RS29265 () 184469..185032 - 564 WP_004152645.1 methyltransferase -
A6P56_RS29270 () 185080..186435 - 1356 WP_004178068.1 DUF3560 domain-containing protein -
A6P56_RS29275 () 186487..186717 - 231 WP_004198570.1 hypothetical protein -
A6P56_RS29280 () 186809..187036 - 228 WP_004178072.1 hypothetical protein -
A6P56_RS29290 () 187818..188135 - 318 WP_004118473.1 hypothetical protein -
A6P56_RS29295 () 188170..188424 - 255 WP_004152754.1 DNA polymerase III subunit theta -
A6P56_RS29300 () 188661..189086 - 426 WP_004118478.1 antirestriction protein -
A6P56_RS29305 () 189607..189837 - 231 WP_004152753.1 hypothetical protein -
A6P56_RS29310 () 190071..191558 - 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
A6P56_RS29320 () 191961..192386 + 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
A6P56_RS29325 () 192386..193657 + 1272 WP_004152715.1 Y-family DNA polymerase -
A6P56_RS29330 () 193736..193951 + 216 Protein_203 type II toxin-antitoxin system Phd/YefM family antitoxin -
A6P56_RS29335 () 193974..195172 - 1199 Protein_204 IS200-IS605 family transposase IS609 Transposase
A6P56_RS29350 () 196609..197580 - 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
A6P56_RS29355 () 197580..198746 - 1167 WP_000523813.1 Sporulation initiation inhibitor protein Soj VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance