MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39889 bp
Accession: NZ_CP015274 Location: 1..39889 Organism: Mycobacterium intracellulare subsp. chimaera strain ZUERICH-1 Replicon: plasmid unnamed 2
Accession: NZ_CP015274 Location: 1..39889 Organism: Mycobacterium intracellulare subsp. chimaera strain ZUERICH-1 Replicon: plasmid unnamed 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYCOZU1_RS29385 () | 16..468 | - | 453 | WP_157682441.1 | ParA family protein | - |
| MYCOZU1_RS29390 () | 569..829 | + | 261 | WP_046182265.1 | hypothetical protein | - |
| MYCOZU1_RS29395 () | 884..1243 | + | 360 | WP_052742707.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| MYCOZU1_RS29400 () | 1846..2124 | + | 279 | WP_046182254.1 | hypothetical protein | - |
| MYCOZU1_RS29405 () | 2409..4250 | + | 1842 | WP_046182255.1 | AMP-binding protein | - |
| MYCOZU1_RS29410 () | 4333..4653 | - | 321 | WP_046182256.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| MYCOZU1_RS29415 () | 4650..4859 | - | 210 | WP_046182257.1 | antitoxin MazE family protein | - |
| MYCOZU1_RS29420 () | 4964..5545 | + | 582 | WP_046182267.1 | hypothetical protein | - |
| MYCOZU1_RS29425 () | 5687..6916 | + | 1230 | WP_172417610.1 | hypothetical protein | - |
| MYCOZU1_RS29430 () | 7273..7782 | - | 510 | WP_046182258.1 | hypothetical protein | - |
| MYCOZU1_RS29435 () | 8279..8485 | + | 207 | WP_046182259.1 | hypothetical protein | - |
| MYCOZU1_RS29440 () | 8914..9936 | + | 1023 | WP_052742709.1 | plasmid replication protein | - |
| MYCOZU1_RS29445 () | 10055..10309 | - | 255 | WP_142383129.1 | antitoxin VbhA family protein | - |
| MYCOZU1_RS29450 () | 10545..13379 | + | 2835 | WP_054585406.1 | relaxase domain-containing protein | - |
| MYCOZU1_RS29455 () | 13524..14321 | + | 798 | WP_046182240.1 | sigma 54 modulation/S30EA ribosomal C-terminal domain-containing protein | - |
| MYCOZU1_RS29460 () | 14390..14779 | + | 390 | Protein_16 | pyridoxamine 5'-phosphate oxidase family protein | - |
| MYCOZU1_RS29465 () | 15008..15292 | + | 285 | WP_082122855.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| MYCOZU1_RS29470 () | 15289..15564 | + | 276 | WP_046182242.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MYCOZU1_RS29475 () | 15682..15897 | - | 216 | WP_046182243.1 | hypothetical protein | - |
| MYCOZU1_RS29480 () | 15974..16249 | + | 276 | WP_046182244.1 | hypothetical protein | - |
| MYCOZU1_RS29485 () | 16398..16964 | + | 567 | WP_046182262.1 | recombinase family protein | - |
| MYCOZU1_RS30710 () | 17440..18192 | + | 753 | WP_172417609.1 | 1-aminocyclopropane-1-carboxylate synthase | - |
| MYCOZU1_RS29500 () | 18426..19382 | + | 957 | WP_082122856.1 | fatty acid desaturase | - |
| MYCOZU1_RS29505 () | 19397..20692 | - | 1296 | WP_046182245.1 | glycosyltransferase | - |
| MYCOZU1_RS29510 () | 20819..31087 | - | 10269 | WP_046182246.1 | non-ribosomal peptide synthetase | - |
| MYCOZU1_RS29515 () | 31630..32082 | - | 453 | WP_046182247.1 | transposase | - |
| MYCOZU1_RS29520 () | 31991..32668 | - | 678 | WP_142383130.1 | transposase | - |
| MYCOZU1_RS29530 () | 32903..34336 | + | 1434 | WP_082122853.1 | DUF2156 domain-containing protein | - |
| MYCOZU1_RS29535 () | 34966..36138 | - | 1173 | WP_080691094.1 | DDE-type integrase/transposase/recombinase | - |
| MYCOZU1_RS29540 () | 36060..36350 | - | 291 | WP_042910035.1 | helix-turn-helix domain-containing protein | - |
| MYCOZU1_RS29545 () | 36570..37259 | + | 690 | WP_046182264.1 | Crp/Fnr family transcriptional regulator | - |
| MYCOZU1_RS29550 () | 37401..38798 | - | 1398 | WP_046182251.1 | IS1380 family transposase | - |
| MYCOZU1_RS29555 () | 39304..39753 | - | 450 | WP_046182252.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|