MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 105292 bp
Accession: NZ_CP015214 Location: 1..105292 Organism: Cereibacter sphaeroides strain MBTLJ-13 Replicon: plasmid c
Accession: NZ_CP015214 Location: 1..105292 Organism: Cereibacter sphaeroides strain MBTLJ-13 Replicon: plasmid c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3858_RS20735 () | 757..993 | + | 237 | WP_017140483.1 | hypothetical protein | - |
| A3858_RS20740 () | 1079..1483 | - | 405 | WP_011331343.1 | BLUF domain-containing protein | - |
| A3858_RS20745 () | 1714..3063 | - | 1350 | WP_017140484.1 | HipA domain-containing protein | - |
| A3858_RS20750 () | 3066..3326 | - | 261 | WP_017140485.1 | helix-turn-helix transcriptional regulator | - |
| A3858_RS20755 () | 3417..3638 | + | 222 | WP_017140486.1 | hypothetical protein | - |
| A3858_RS22975 () | 4038..4454 | - | 417 | WP_160384194.1 | translation initiation factor 2 GTPase | - |
| A3858_RS22980 () | 5056..5574 | + | 519 | WP_011331339.1 | hypothetical protein | - |
| A3858_RS20765 () | 5847..6164 | - | 318 | WP_011331338.1 | H-NS histone family protein | - |
| A3858_RS20770 () | 6764..7078 | - | 315 | WP_011331337.1 | H-NS histone family protein | - |
| A3858_RS20775 () | 7632..8864 | + | 1233 | WP_011331336.1 | aldo/keto reductase | - |
| A3858_RS20780 () | 9349..10776 | + | 1428 | WP_061350907.1 | Alginate biosynthesis protein AlgA | VF |
| A3858_RS20785 () | 10778..12187 | + | 1410 | WP_011331334.1 | Phosphoglucosamine mutase | VF |
| A3858_RS23590 () | 12257..12535 | - | 279 | WP_017140491.1 | hypothetical protein | - |
| A3858_RS22990 () | 13077..13448 | + | 372 | WP_080588243.1 | excalibur calcium-binding domain-containing protein | - |
| A3858_RS20795 () | 13810..15186 | + | 1377 | WP_011339201.1 | ISNCY family transposase ISRel26 | Transposase |
| A3858_RS23595 () | 15379..15561 | - | 183 | WP_017140492.1 | hypothetical protein | - |
| A3858_RS20805 () | 16229..16870 | + | 642 | WP_011331413.1 | helix-turn-helix transcriptional regulator | - |
| A3858_RS20810 () | 17079..17801 | + | 723 | WP_011331412.1 | Transcriptional regulatory protein DegU | VF |
| A3858_RS20815 () | 17835..18101 | + | 267 | WP_011331411.1 | hypothetical protein | - |
| A3858_RS20820 () | 18314..18976 | - | 663 | WP_011331410.1 | response regulator transcription factor | - |
| A3858_RS20825 () | 19892..20446 | + | 555 | WP_011331409.1 | hypothetical protein | - |
| A3858_RS20830 () | 20451..21203 | - | 753 | WP_011331408.1 | porin family protein | - |
| A3858_RS20835 () | 21835..22209 | + | 375 | WP_017140494.1 | hypothetical protein | - |
| A3858_RS20840 () | 22758..22976 | + | 219 | WP_017140495.1 | hypothetical protein | - |
| A3858_RS20845 () | 23120..23380 | - | 261 | WP_030002946.1 | WGR domain-containing protein | - |
| A3858_RS20850 () | 23885..25078 | - | 1194 | WP_017140497.1 | AAA family ATPase | - |
| A3858_RS20855 () | 25989..26207 | + | 219 | WP_017140498.1 | hypothetical protein | - |
| A3858_RS20860 () | 26207..26986 | + | 780 | WP_011331406.1 | hypothetical protein | - |
| A3858_RS20865 () | 27103..28146 | - | 1044 | WP_011331405.1 | nucleotidyltransferase domain-containing protein | - |
| A3858_RS23600 () | 28125..28328 | - | 204 | WP_147176022.1 | hypothetical protein | - |
| A3858_RS20870 () | 28520..29005 | - | 486 | WP_017208417.1 | hypothetical protein | - |
| A3858_RS20875 () | 29698..32386 | - | 2689 | Protein_32 | hypothetical protein | - |
| A3858_RS20880 () | 32671..33477 | + | 807 | WP_011331403.1 | hypothetical protein | - |
| A3858_RS20885 () | 33494..33673 | - | 180 | WP_017140501.1 | hypothetical protein | - |
| A3858_RS20890 () | 34127..35458 | + | 1332 | WP_017140502.1 | YadA-like family protein | - |
| A3858_RS20895 () | 35522..35983 | + | 462 | WP_011331401.1 | hypothetical protein | - |
| A3858_RS20900 () | 36124..36807 | - | 684 | WP_011331400.1 | cytochrome c-type protein NapC | - |
| A3858_RS20905 () | 36809..37273 | - | 465 | WP_011331399.1 | nitrate reductase cytochrome c-type subunit | - |
| A3858_RS20910 () | 37276..39771 | - | 2496 | WP_011331398.1 | periplasmic nitrate reductase subunit alpha | - |
| A3858_RS20915 () | 39768..40034 | - | 267 | WP_011331397.1 | chaperone NapD | - |
| A3858_RS20920 () | 40027..40509 | - | 483 | WP_011331396.1 | ferredoxin-type protein NapF | - |
| A3858_RS20925 () | 40515..40697 | - | 183 | WP_011331395.1 | periplasmic nitrate reductase, NapE protein | - |
| A3858_RS20930 () | 40708..40890 | - | 183 | WP_017140504.1 | hypothetical protein | - |
| A3858_RS23405 () | 41060..41195 | + | 136 | Protein_44 | IS3 family transposase | - |
| A3858_RS20935 () | 41287..44082 | - | 2796 | WP_061350905.1 | Phytochrome-like protein cph2 | VF |
| A3858_RS20940 () | 44150..44743 | - | 594 | WP_011331449.1 | biliverdin-producing heme oxygenase | - |
| A3858_RS20945 () | 45456..46340 | + | 885 | WP_011331391.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| A3858_RS20950 () | 46749..47801 | - | 1053 | WP_011331390.1 | ParB N-terminal domain-containing protein | - |
| A3858_RS20955 () | 47801..49108 | - | 1308 | WP_011331389.1 | AAA family ATPase | - |
| A3858_RS20960 () | 49469..50179 | + | 711 | WP_011331388.1 | hypothetical protein | - |
| A3858_RS23005 () | 50445..50753 | + | 309 | Protein_51 | IS5 family transposase ISSpo7 | Transposase |
| A3858_RS23010 () | 50764..51052 | + | 289 | Protein_52 | IS5 family transposase ISSpo7 | Transposase |
| A3858_RS20970 () | 51446..51682 | + | 237 | WP_017140462.1 | hypothetical protein | - |
| A3858_RS23020 () | 51771..52010 | + | 240 | WP_080588244.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| A3858_RS20975 () | 52007..52399 | + | 393 | WP_011331387.1 | type II toxin-antitoxin system VapC family toxin | - |
| A3858_RS23410 () | 53134..53286 | - | 153 | Protein_56 | IS5/IS1182 family transposase | - |
| A3858_RS23030 () | 53729..54490 | + | 762 | WP_011331386.1 | glycosyltransferase | - |
| A3858_RS20980 () | 54487..55608 | + | 1122 | WP_011331385.1 | GDP-mannose 4,6-dehydratase | VF |
| A3858_RS20985 () | 55612..56574 | + | 963 | WP_011331384.1 | GDP-L-fucose synthase | VF |
| A3858_RS20990 () | 56791..58485 | - | 1695 | WP_011331383.1 | recombinase family protein | - |
| A3858_RS20995 () | 58500..59162 | - | 663 | WP_011331382.1 | hypothetical protein | - |
| A3858_RS23605 () | 59253..59405 | - | 153 | WP_017140463.1 | hypothetical protein | - |
| A3858_RS21000 () | 59535..59969 | - | 435 | WP_011331381.1 | hypothetical protein | - |
| A3858_RS21005 () | 60026..60601 | - | 576 | WP_011331380.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| A3858_RS21010 () | 61138..62559 | + | 1422 | WP_011331379.1 | hypothetical protein | Relaxase |
| A3858_RS21015 () | 62642..62995 | + | 354 | WP_011331378.1 | glycoside hydrolase | - |
| A3858_RS21020 () | 63573..64918 | + | 1346 | Protein_67 | IS5 family transposase ISRhsp1 | Transposase |
| A3858_RS21025 () | 65218..65946 | + | 729 | WP_011331377.1 | class I SAM-dependent methyltransferase | - |
| A3858_RS23610 () | 66083..66307 | - | 225 | WP_160384192.1 | hypothetical protein | - |
| A3858_RS23615 () | 66693..67202 | + | 510 | WP_160384191.1 | hypothetical protein | - |
| A3858_RS23045 () | 68009..69181 | + | 1173 | WP_162129772.1 | hypothetical protein | - |
| A3858_RS23050 () | 69279..70415 | + | 1137 | WP_011331373.1 | glycosyltransferase | - |
| A3858_RS23055 () | 70479..71606 | - | 1128 | Protein_73 | IS630 family transposase | - |
| A3858_RS23060 () | 71996..72550 | + | 555 | WP_011331372.1 | putative colanic acid biosynthesis acetyltransferase | - |
| A3858_RS21045 () | 73041..73142 | + | 102 | Protein_75 | IS3 family transposase ISKpn40 | Transposase |
| A3858_RS21050 () | 73992..75074 | + | 1083 | WP_011331371.1 | hypothetical protein | VF |
| A3858_RS21055 () | 75084..75527 | + | 444 | WP_017140467.1 | Low molecular weight protein-tyrosine-phosphatase Wzb | VF |
| A3858_RS21060 () | 75524..77725 | + | 2202 | WP_011331369.1 | Tyrosine-protein kinase etk | VF |
| A3858_RS21065 () | 78188..78622 | - | 435 | WP_011331368.1 | glycine zipper family protein | - |
| A3858_RS21070 () | 79079..80143 | + | 1065 | WP_011331367.1 | acyltransferase | - |
| A3858_RS21075 () | 80667..80882 | + | 216 | WP_017140469.1 | hypothetical protein | - |
| A3858_RS21080 () | 81458..82165 | - | 708 | WP_011331366.1 | RES family NAD+ phosphorylase | - |
| A3858_RS21085 () | 82162..82563 | - | 402 | WP_030002945.1 | MbcA/ParS/Xre antitoxin family protein | - |
| A3858_RS21090 () | 82605..84635 | + | 2031 | WP_017140471.1 | tetratricopeptide repeat protein | - |
| A3858_RS23070 () | 84941..85108 | - | 168 | Protein_85 | Hsp20/alpha crystallin family protein | - |
| A3858_RS21095 () | 85140..87764 | - | 2625 | WP_017140473.1 | putative cation-transporting ATPase F | VF |
| A3858_RS23075 () | 87773..87931 | - | 159 | WP_017140474.1 | Cyclopentanol dehydrogenase | VF |
| A3858_RS21100 () | 88253..88660 | - | 408 | WP_011331362.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| A3858_RS21105 () | 88660..88890 | - | 231 | WP_011331361.1 | antitoxin | Antitoxin Detail |
| A3858_RS21110 () | 89279..90112 | - | 834 | WP_017140476.1 | hypothetical protein | - |
| A3858_RS21115 () | 90325..90750 | - | 426 | WP_011331359.1 | hypothetical protein | - |
| A3858_RS21120 () | 91038..91463 | + | 426 | WP_011331358.1 | helix-turn-helix transcriptional regulator | - |
| A3858_RS21125 () | 92026..92913 | + | 888 | WP_011331357.1 | viral aspartic protease | - |
| A3858_RS21130 () | 92910..93998 | + | 1089 | WP_011331356.1 | hypothetical protein | - |
| A3858_RS21135 () | 94097..94432 | - | 336 | WP_017140477.1 | hypothetical protein | - |
| A3858_RS21140 () | 94862..96310 | - | 1449 | WP_011331354.1 | caspase family protein | - |
| A3858_RS21145 () | 96326..96820 | - | 495 | WP_017140478.1 | hypothetical protein | - |
| A3858_RS21150 () | 96915..97307 | - | 393 | WP_011331352.1 | hypothetical protein | - |
| A3858_RS21155 () | 97576..98623 | - | 1048 | Protein_99 | hypothetical protein | - |
| A3858_RS23080 () | 98668..99019 | - | 352 | Protein_100 | hypothetical protein | - |
| A3858_RS21160 () | 99406..100437 | + | 1032 | Protein_101 | hypothetical protein | - |
| A3858_RS23085 () | 100466..101078 | - | 613 | Protein_102 | hypothetical protein | - |
| A3858_RS21170 () | 101800..102168 | + | 369 | WP_017140482.1 | hypothetical protein | - |
| A3858_RS21175 () | 102299..102670 | - | 372 | WP_011331346.1 | hypothetical protein | - |
| A3858_RS21180 () | 102688..104765 | - | 2078 | Protein_105 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|