MGE detailed information
MGE type: Genomic_island MGE length: 48966 bp
Accession: NZ_CP015159 Location: 1843146..1892111 Organism: Escherichia coli strain Eco889 Replicon: chromosome
Accession: NZ_CP015159 Location: 1843146..1892111 Organism: Escherichia coli strain Eco889 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM90_RS09075 () | 1838440..1838841 | + | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
| WM90_RS09080 () | 1838880..1839935 | - | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| WM90_RS09085 () | 1840224..1841327 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| WM90_RS09090 () | 1841339..1842592 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| WM90_RS30615 () | 1842797..1843000 | - | 204 | Protein_1706 | integrase | - |
| WM90_RS09100 () | 1843146..1843616 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| WM90_RS30620 () | 1843594..1843779 | - | 186 | WP_101918754.1 | ash family protein | - |
| WM90_RS09105 () | 1843959..1845206 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| WM90_RS09110 () | 1845196..1846833 | - | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| WM90_RS09115 () | 1846827..1849925 | - | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| WM90_RS09120 () | 1850209..1850991 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| WM90_RS09125 () | 1850978..1851898 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| WM90_RS27390 () | 1852063..1853382 | - | 1320 | Protein_1714 | Prophage integrase IntA ; Integrase | Integrase |
| WM90_RS30330 () | 1853609..1853767 | - | 159 | Protein_1715 | integrase | - |
| WM90_RS09140 () | 1853816..1854001 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| WM90_RS09145 () | 1854216..1854830 | + | 615 | WP_001019923.1 | YagU family protein | - |
| WM90_RS27400 () | 1854904..1855067 | + | 164 | Protein_1718 | tail fiber assembly protein | - |
| WM90_RS09150 () | 1855079..1855408 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| WM90_RS09155 () | 1855715..1856425 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| WM90_RS09160 () | 1856394..1858037 | - | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| WM90_RS09165 () | 1858027..1860552 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| WM90_RS09170 () | 1860578..1861246 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| WM90_RS09175 () | 1861303..1861890 | - | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| WM90_RS09180 () | 1861965..1862507 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| WM90_RS29135 () | 1863331..1863521 | + | 191 | Protein_1726 | hypothetical protein | - |
| WM90_RS09185 () | 1863591..1863731 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| WM90_RS09190 () | 1863731..1863994 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| WM90_RS09195 () | 1864359..1864460 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| WM90_RS09200 () | 1864933..1866075 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| WM90_RS09205 () | 1866248..1867168 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| WM90_RS09210 () | 1867325..1868251 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| WM90_RS09215 () | 1868451..1869344 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| WM90_RS09220 () | 1869375..1870364 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| WM90_RS09225 () | 1870391..1871242 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| WM90_RS09230 () | 1871808..1876055 | + | 4248 | WP_000092553.1 | Invasin | VF |
| WM90_RS09235 () | 1876180..1877037 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| WM90_RS09240 () | 1877285..1878154 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| WM90_RS09245 () | 1878314..1878907 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| WM90_RS09250 () | 1878919..1879155 | - | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| WM90_RS09255 () | 1879264..1880589 | - | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| WM90_RS09260 () | 1880816..1881670 | + | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| WM90_RS09265 () | 1882196..1882915 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| WM90_RS09270 () | 1882926..1884353 | + | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| WM90_RS09275 () | 1884346..1885041 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| WM90_RS09285 () | 1885284..1885952 | - | 669 | WP_001545820.1 | hypothetical protein | - |
| WM90_RS29820 () | 1886136..1887329 | - | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| WM90_RS30335 () | 1887351..1888427 | - | 1077 | Protein_1748 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| WM90_RS09295 () | 1888469..1889230 | - | 762 | WP_001524129.1 | protein HyxA | - |
| WM90_RS09300 () | 1889384..1890178 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| WM90_RS09305 () | 1890508..1891071 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| WM90_RS09315 () | 1892153..1893823 | - | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| WM90_RS09320 () | 1893837..1895309 | - | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| WM90_RS09325 () | 1895323..1895910 | - | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|