MGE detailed information
MGE type: Genomic_island MGE length: 48966 bp
Accession: NZ_CP015069 Location: 3945610..3994575 Organism: Escherichia coli strain Ecol_743 Replicon: chromosome
Accession: NZ_CP015069 Location: 3945610..3994575 Organism: Escherichia coli strain Ecol_743 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4R39_RS19305 () | 3940904..3941305 | + | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
| A4R39_RS19310 () | 3941344..3942399 | - | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| A4R39_RS19315 () | 3942688..3943791 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| A4R39_RS19320 () | 3943803..3945056 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| A4R39_RS28950 () | 3945261..3945464 | - | 204 | Protein_3660 | integrase | - |
| A4R39_RS19330 () | 3945610..3946080 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| A4R39_RS28955 () | 3946058..3946243 | - | 186 | WP_101918754.1 | ash family protein | - |
| A4R39_RS19335 () | 3946423..3947670 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| A4R39_RS19340 () | 3947660..3949297 | - | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| A4R39_RS19345 () | 3949291..3952389 | - | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| A4R39_RS19350 () | 3952673..3953455 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| A4R39_RS19355 () | 3953442..3954362 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| A4R39_RS27085 () | 3954527..3955846 | - | 1320 | Protein_3668 | Prophage integrase IntA ; Integrase | Integrase |
| A4R39_RS28855 () | 3956073..3956231 | - | 159 | Protein_3669 | integrase | - |
| A4R39_RS19370 () | 3956280..3956465 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| A4R39_RS19375 () | 3956680..3957294 | + | 615 | WP_001019923.1 | YagU family protein | - |
| A4R39_RS27095 () | 3957368..3957531 | + | 164 | Protein_3672 | tail fiber assembly protein | - |
| A4R39_RS19380 () | 3957543..3957872 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| A4R39_RS19385 () | 3958179..3958889 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| A4R39_RS19390 () | 3958858..3960501 | - | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| A4R39_RS19395 () | 3960491..3963016 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| A4R39_RS19400 () | 3963042..3963710 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| A4R39_RS19405 () | 3963767..3964354 | - | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| A4R39_RS19410 () | 3964429..3964971 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| A4R39_RS28020 () | 3965795..3965985 | + | 191 | Protein_3680 | hypothetical protein | - |
| A4R39_RS19415 () | 3966055..3966195 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| A4R39_RS19420 () | 3966195..3966458 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| A4R39_RS19425 () | 3966823..3966924 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| A4R39_RS19430 () | 3967397..3968539 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| A4R39_RS19435 () | 3968712..3969632 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| A4R39_RS19440 () | 3969789..3970715 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| A4R39_RS19445 () | 3970915..3971808 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| A4R39_RS19450 () | 3971839..3972828 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| A4R39_RS19455 () | 3972855..3973706 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| A4R39_RS19460 () | 3974272..3978519 | + | 4248 | WP_000092553.1 | Invasin | VF |
| A4R39_RS19465 () | 3978644..3979501 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| A4R39_RS19470 () | 3979749..3980618 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| A4R39_RS19475 () | 3980778..3981371 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| A4R39_RS19480 () | 3981383..3981619 | - | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| A4R39_RS19485 () | 3981728..3983053 | - | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| A4R39_RS19490 () | 3983280..3984134 | + | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| A4R39_RS19495 () | 3984660..3985379 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| A4R39_RS19500 () | 3985390..3986817 | + | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| A4R39_RS19505 () | 3986810..3987505 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| A4R39_RS19515 () | 3987748..3988416 | - | 669 | WP_001545820.1 | hypothetical protein | - |
| A4R39_RS28605 () | 3988600..3989793 | - | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| A4R39_RS28610 () | 3989815..3990891 | - | 1077 | Protein_3702 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| A4R39_RS19525 () | 3990933..3991694 | - | 762 | WP_001524129.1 | protein HyxA | - |
| A4R39_RS19530 () | 3991848..3992642 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| A4R39_RS19535 () | 3992972..3993535 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| A4R39_RS19545 () | 3994617..3996287 | - | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| A4R39_RS19550 () | 3996301..3997773 | - | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| A4R39_RS19555 () | 3997787..3998374 | - | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|