MGE detailed information
MGE type: Conjugative plasmid MGE length: 101201 bp
Accession: NZ_CP014668 Location: 1..101201 Organism: Escherichia coli strain ECONIH2 Replicon: plasmid pECO-bc6
Accession: NZ_CP014668 Location: 1..101201 Organism: Escherichia coli strain ECONIH2 Replicon: plasmid pECO-bc6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM48_RS25090 () | 1..591 | + | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| WM48_RS25095 () | 831..1091 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| WM48_RS25100 () | 1324..1398 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| WM48_RS25105 () | 1391..2248 | + | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| WM48_RS25115 () | 3304..4008 | + | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| WM48_RS25120 () | 4038..4265 | + | 228 | WP_077459403.1 | DsbA family protein | - |
| WM48_RS25125 () | 4255..4761 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| WM48_RS25130 () | 4944..5759 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| WM48_RS25135 () | 6106..7992 | + | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| WM48_RS25140 () | 8033..8560 | + | 528 | WP_000178050.1 | iron transporter | - |
| WM48_RS25145 () | 8664..10043 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| WM48_RS25150 () | 10046..11329 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| WM48_RS25155 () | 11319..12449 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| WM48_RS25160 () | 12454..13149 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| WM48_RS25165 () | 13136..13621 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| WM48_RS25170 () | 13646..14131 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| WM48_RS28880 () | 14253..14886 | + | 634 | Protein_16 | histidine-type phosphatase | - |
| WM48_RS29740 () | 15036..15209 | - | 174 | Protein_17 | IS5 family transposase ISKpn26 | Transposase |
| WM48_RS29745 () | 15210..15524 | - | 315 | Protein_18 | IS5 family transposase ISKpn26 | Transposase |
| WM48_RS25200 () | 16197..16732 | - | 536 | Protein_19 | IS3 family transposase IS629 | Transposase |
| WM48_RS29485 () | 16739..17394 | + | 656 | Protein_20 | IS3 family transposase IS629 | Transposase |
| WM48_RS25220 () | 18067..19575 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| WM48_RS25225 () | 19665..20048 | + | 384 | Protein_22 | IS3 family transposase IS629 | Transposase |
| WM48_RS25230 () | 20077..20481 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| WM48_RS25235 () | 20478..20825 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| WM48_RS25245 () | 20874..21819 | + | 946 | Protein_25 | IS66 family transposase ISEc8 | Transposase |
| WM48_RS25250 () | 21905..22927 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| WM48_RS25255 () | 22924..23706 | + | 783 | WP_077884650.1 | IS21 family transposase IS100kyp | Transposase |
| WM48_RS25260 () | 23774..24382 | + | 609 | Protein_28 | IS66 family transposase ISEc22 | Transposase |
| WM48_RS25265 () | 24445..25236 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| WM48_RS25270 () | 25243..27213 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| WM48_RS25280 () | 27495..27931 | + | 437 | Protein_31 | IS3 family transposase IS2 | Transposase |
| WM48_RS28185 () | 28456..28728 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| WM48_RS29490 () | 29174..29349 | + | 176 | Protein_33 | IS3 family transposase | - |
| WM48_RS25290 () | 29575..30744 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| WM48_RS25295 () | 31111..31299 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| WM48_RS25300 () | 31420..32160 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| WM48_RS25305 () | 32403..33380 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| WM48_RS25320 () | 34555..35196 | - | 642 | WP_000990667.1 | hypothetical protein | - |
| WM48_RS25325 () | 37518..37736 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| WM48_RS25330 () | 37738..38043 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| WM48_RS25335 () | 38044..38853 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| WM48_RS25340 () | 38991..39266 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| WM48_RS25345 () | 39260..39904 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| WM48_RS25350 () | 40133..41104 | + | 972 | WP_001103694.1 | hypothetical protein | - |
| WM48_RS25355 () | 41109..41501 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| WM48_RS25360 () | 41506..42776 | - | 1271 | Protein_46 | translesion error-prone DNA polymerase V subunit UmuC | - |
| WM48_RS25365 () | 42776..43213 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| WM48_RS25370 () | 43210..43458 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| WM48_RS25375 () | 43593..44111 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| WM48_RS25380 () | 44130..45350 | + | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| WM48_RS25385 () | 45769..46599 | + | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| WM48_RS25390 () | 46593..47390 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| WM48_RS25395 () | 47390..48562 | - | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| WM48_RS25400 () | 48603..48806 | + | 204 | WP_001298677.1 | hypothetical protein | - |
| WM48_RS28895 () | 48803..49114 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| WM48_RS25410 () | 49190..49873 | + | 684 | WP_000086169.1 | DNA methylase | - |
| WM48_RS25415 () | 49874..50095 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| WM48_RS25420 () | 50109..50543 | + | 435 | WP_000274508.1 | DUF1380 family protein | - |
| WM48_RS25425 () | 50588..51358 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| WM48_RS25430 () | 51897..52199 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| WM48_RS25435 () | 52246..52668 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| WM48_RS29750 () | 52665..52856 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| WM48_RS29755 () | 52826..53306 | - | 481 | Protein_63 | hypothetical protein | - |
| WM48_RS25445 () | 53819..54049 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| WM48_RS25450 () | 54101..55462 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| WM48_RS25455 () | 55509..56072 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| WM48_RS28920 () | 56158..56640 | - | 483 | WP_065089990.1 | hypothetical protein | - |
| WM48_RS25465 () | 56942..57469 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| WM48_RS25470 () | 57526..57759 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| WM48_RS25475 () | 57818..59776 | + | 1959 | WP_001145500.1 | ParB/RepB/Spo0J family partition protein | - |
| WM48_RS25480 () | 59831..60265 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| WM48_RS25485 () | 60262..60981 | + | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| - () | 60993..61192 | + | 200 | NuclAT_0 | - | - |
| - () | 60993..61192 | + | 200 | NuclAT_0 | - | - |
| - () | 60993..61192 | + | 200 | NuclAT_0 | - | - |
| - () | 60993..61192 | + | 200 | NuclAT_0 | - | - |
| WM48_RS25495 () | 61257..61415 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| WM48_RS25515 () | 62331..62618 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| WM48_RS25520 () | 62737..63558 | + | 822 | WP_001234489.1 | DUF945 domain-containing protein | - |
| WM48_RS25525 () | 63854..64456 | - | 603 | WP_001323326.1 | hypothetical protein | VF |
| WM48_RS25530 () | 64787..65170 | + | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| WM48_RS25535 () | 65364..66050 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| WM48_RS25540 () | 66144..66371 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| WM48_RS25545 () | 66405..66764 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| WM48_RS25550 () | 66779..67090 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| WM48_RS25555 () | 67112..67678 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| WM48_RS25560 () | 67689..68393 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| WM48_RS25565 () | 68393..69820 | + | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| WM48_RS25570 () | 69810..70400 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| WM48_RS25575 () | 70354..70707 | + | 354 | WP_071586423.1 | conjugal transfer protein TrbD | - |
| WM48_RS25580 () | 70719..70952 | + | 234 | WP_000235790.1 | conjugal transfer protein TrbG | - |
| WM48_RS25585 () | 70949..71464 | + | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| WM48_RS28255 () | 71599..71820 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| WM48_RS25590 () | 71813..72286 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| WM48_RS28260 () | 72366..72584 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| WM48_RS25595 () | 72951..75581 | + | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| WM48_RS25600 () | 75578..75964 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| WM48_RS25605 () | 75961..76593 | + | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| WM48_RS25610 () | 76590..77582 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| WM48_RS25615 () | 77612..77917 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| WM48_RS25620 () | 77926..78564 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| WM48_RS25625 () | 78561..80411 | + | 1851 | Protein_98 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| WM48_RS25630 () | 80438..80695 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| WM48_RS25635 () | 80688..81431 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| WM48_RS28265 () | 81445..81786 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| WM48_RS25640 () | 81767..82102 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| WM48_RS25645 () | 82183..82467 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| WM48_RS25650 () | 82454..82999 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| WM48_RS25655 () | 82929..83276 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| WM48_RS25660 () | 83224..83649 | + | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| WM48_RS25665 () | 83636..85009 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| WM48_RS25670 () | 85006..87828 | + | 2823 | WP_001007080.1 | conjugal transfer mating pair stabilization protein TraG | - |
| WM48_RS25675 () | 87844..88329 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| WM48_RS25680 () | 88378..89109 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| WM48_RS25685 () | 89312..90049 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| WM48_RS25690 () | 90100..92244 | + | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| WM48_RS25695 () | 92244..97514 | + | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| WM48_RS25700 () | 97534..98280 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| WM48_RS25705 () | 98339..99199 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| WM48_RS25710 () | 99302..99862 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| WM48_RS25715 () | 99991..100203 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| WM48_RS25720 () | 100448..100909 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| WM48_RS25725 () | 100955..101164 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|