MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP014667 Location: 263894..284575 Organism: Escherichia coli strain ECONIH2 Replicon: chromosome
Accession: NZ_CP014667 Location: 263894..284575 Organism: Escherichia coli strain ECONIH2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM48_RS01205 () | 260009..260434 | - | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
| WM48_RS01210 () | 260439..261923 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| WM48_RS01215 () | 261946..262449 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| WM48_RS01220 () | 263155..263673 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| WM48_RS01230 () | 263894..265876 | + | 1983 | WP_000053624.1 | hypothetical protein | VF |
| WM48_RS01235 () | 265983..267029 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| WM48_RS01240 () | 267022..268461 | + | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| WM48_RS01245 () | 268436..268726 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| WM48_RS28365 () | 268984..269748 | + | 765 | Protein_237 | ISAs1 family transposase | - |
| WM48_RS01260 () | 269977..270480 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| WM48_RS01265 () | 270574..271062 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| WM48_RS28945 () | 271088..271282 | + | 195 | Protein_240 | transposase | - |
| WM48_RS01270 () | 271333..272103 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| WM48_RS01275 () | 272284..272730 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| WM48_RS01280 () | 272773..275217 | - | 2445 | WP_000973131.1 | Polyphosphate:ADP/GDP phosphotransferase | VF |
| WM48_RS01285 () | 275457..276035 | + | 579 | WP_000284050.1 | Polyphosphate:ADP/GDP phosphotransferase | VF |
| WM48_RS01290 () | 276240..277007 | + | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| WM48_RS01295 () | 276978..277718 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| WM48_RS01300 () | 278030..278779 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| WM48_RS01305 () | 278955..279452 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| WM48_RS28950 () | 279535..279744 | - | 210 | WP_071778446.1 | hypothetical protein | - |
| WM48_RS01310 () | 279772..281484 | - | 1713 | Protein_250 | putative oxidoreductase | VF |
| WM48_RS01315 () | 281456..282241 | + | 786 | WP_000207578.1 | (2E,6E)-farnesyl diphosphate synthase | VF |
| WM48_RS01320 () | 282312..283367 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| WM48_RS01325 () | 283419..283712 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| WM48_RS01330 () | 283715..284113 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| WM48_RS01335 () | 284123..284575 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| WM48_RS01340 () | 284765..285904 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| WM48_RS01345 () | 285901..286515 | + | 615 | WP_000602124.1 | peptide chain release factor H | - |
| WM48_RS01350 () | 286572..288029 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| WM48_RS01355 () | 288290..288748 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - () | 289344..289424 | + | 81 | NuclAT_4 | - | - |
| - () | 289344..289424 | + | 81 | NuclAT_4 | - | - |
| - () | 289344..289424 | + | 81 | NuclAT_4 | - | - |
| - () | 289344..289424 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|