MGE detailed information
MGE type: Prophage MGE length: 94775 bp
Accession: NZ_CP014441 Location: 860943..955717 Organism: Staphylococcus aureus strain USA300-SUR23 Replicon: chromosome
Accession: NZ_CP014441 Location: 860943..955717 Organism: Staphylococcus aureus strain USA300-SUR23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM36_RS04340 () | 856004..857521 | + | 1518 | WP_001085505.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| AYM36_RS04345 () | 857651..858955 | + | 1305 | WP_001121760.1 | phosphopyruvate hydratase | - |
| AYM36_RS04350 () | 859295..859753 | + | 459 | WP_000785252.1 | hypothetical protein | - |
| AYM36_RS04355 () | 859820..860053 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| AYM36_RS04360 () | 860169..860909 | + | 741 | WP_001165952.1 | carboxylesterase | - |
| AYM36_RS04365 () | 860943..863315 | + | 2373 | WP_001050064.1 | ribonuclease R | - |
| AYM36_RS04370 () | 863337..863801 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| AYM36_RS04385 () | 865123..865446 | - | 324 | WP_001058299.1 | hypothetical protein | - |
| AYM36_RS15890 () | 865462..865715 | - | 254 | Protein_805 | hypothetical protein | - |
| AYM36_RS04395 () | 865800..866527 | - | 728 | Protein_806 | DUF5067 domain-containing protein | - |
| AYM36_RS04400 () | 866963..867118 | + | 156 | WP_001790158.1 | hypothetical protein | - |
| AYM36_RS04405 () | 867126..867647 | + | 522 | Protein_808 | hypothetical protein | - |
| AYM36_RS04410 () | 867786..868316 | + | 531 | WP_001167175.1 | N-acetyltransferase | - |
| AYM36_RS04415 () | 868579..871380 | + | 2802 | WP_001056223.1 | hypothetical protein | VF |
| AYM36_RS04420 () | 871601..873127 | + | 1527 | WP_000791729.1 | hypothetical protein | VF |
| AYM36_RS04425 () | 873478..874500 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| AYM36_RS04430 () | 874835..875305 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| AYM36_RS04435 () | 875646..876332 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| AYM36_RS04440 () | 876689..876889 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| AYM36_RS04445 () | 877385..877603 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| AYM36_RS04450 () | 877665..877949 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| AYM36_RS04455 () | 878037..878606 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| AYM36_RS04460 () | 878794..878982 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| AYM36_RS04465 () | 879011..879271 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| AYM36_RS04470 () | 879612..879815 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| AYM36_RS04475 () | 879812..880048 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| AYM36_RS04480 () | 880273..880854 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| AYM36_RS04485 () | 880927..881544 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| AYM36_RS04490 () | 881699..882193 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| AYM36_RS04495 () | 882592..883014 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| AYM36_RS04500 () | 883162..883878 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| AYM36_RS04505 () | 883961..884500 | + | 540 | WP_000422909.1 | nitroreductase | - |
| AYM36_RS04510 () | 884650..884970 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| AYM36_RS04515 () | 885114..885470 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| AYM36_RS04520 () | 885628..886008 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| AYM36_RS04530 () | 886187..887065 | + | 879 | WP_000932219.1 | DUF1963 domain-containing protein | - |
| AYM36_RS04540 () | 887807..888193 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| AYM36_RS04545 () | 888186..888482 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| AYM36_RS04550 () | 888732..889757 | + | 1026 | WP_000571218.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| AYM36_RS04555 () | 889750..890445 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| AYM36_RS04560 () | 890463..891284 | + | 822 | WP_000732326.1 | hypothetical protein | VF |
| AYM36_RS04565 () | 891427..892647 | - | 1221 | WP_000266158.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AYM36_RS04570 () | 892735..893463 | - | 729 | WP_000734020.1 | hypothetical protein | VF |
| AYM36_RS04575 () | 893487..894215 | - | 729 | WP_001033321.1 | hypothetical protein | VF |
| AYM36_RS04580 () | 894232..894690 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AYM36_RS04585 () | 894702..895034 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| AYM36_RS04590 () | 895227..895490 | + | 264 | WP_000243849.1 | helix-turn-helix domain-containing protein | - |
| AYM36_RS04595 () | 895483..895755 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| AYM36_RS04600 () | 895767..895940 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| AYM36_RS04605 () | 895907..896110 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| AYM36_RS04610 () | 896112..896495 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| AYM36_RS04615 () | 896496..896744 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| AYM36_RS04620 () | 896836..899208 | + | 2373 | WP_000985235.1 | primase | - |
| AYM36_RS04625 () | 899879..900223 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| AYM36_RS04635 () | 900448..900654 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| AYM36_RS04640 () | 900641..901699 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| AYM36_RS04645 () | 901883..902374 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| AYM36_RS04650 () | 902374..902526 | + | 153 | Protein_854 | terminase small subunit | - |
| AYM36_RS04660 () | 902803..903771 | + | 969 | WP_000801979.1 | Abi family protein | - |
| AYM36_RS04665 () | 904006..904560 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
| AYM36_RS04670 () | 905594..905788 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| AYM36_RS04675 () | 906021..906872 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| AYM36_RS04680 () | 907200..907961 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| AYM36_RS04685 () | 908059..909366 | + | 1308 | WP_077445410.1 | Fe-S cluster assembly protein SufD | - |
| AYM36_RS04690 () | 909472..910722 | + | 1251 | WP_001006454.1 | cysteine desulfurase | - |
| AYM36_RS04695 () | 910712..911176 | + | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| AYM36_RS04700 () | 911327..912724 | + | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| AYM36_RS04705 () | 912792..913841 | - | 1050 | WP_050961182.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AYM36_RS04710 () | 913903..914418 | - | 516 | WP_050961183.1 | hypothetical protein | - |
| AYM36_RS04715 () | 914422..914922 | - | 501 | WP_000896616.1 | hypothetical protein | - |
| AYM36_RS04720 () | 914970..915644 | - | 675 | WP_050961185.1 | XRE family transcriptional regulator | - |
| AYM36_RS04725 () | 915836..916075 | + | 240 | WP_001014907.1 | helix-turn-helix transcriptional regulator | - |
| AYM36_RS04730 () | 916091..916294 | + | 204 | WP_050961186.1 | hypothetical protein | - |
| AYM36_RS04735 () | 916482..917273 | + | 792 | WP_050961187.1 | phage antirepressor KilAC domain-containing protein | - |
| AYM36_RS04740 () | 917274..917498 | + | 225 | WP_000187184.1 | hypothetical protein | - |
| AYM36_RS04745 () | 917538..917987 | + | 450 | WP_025920885.1 | hypothetical protein | - |
| AYM36_RS04750 () | 918001..918222 | + | 222 | WP_000977378.1 | hypothetical protein | - |
| AYM36_RS04755 () | 918215..918382 | + | 168 | WP_000066013.1 | DUF1270 domain-containing protein | - |
| AYM36_RS04760 () | 918383..918703 | + | 321 | WP_033843163.1 | hypothetical protein | - |
| AYM36_RS04765 () | 918797..919057 | + | 261 | WP_000291075.1 | hypothetical protein ; Integrase | Integrase |
| AYM36_RS04770 () | 919065..919301 | + | 237 | WP_000802315.1 | hypothetical protein | - |
| AYM36_RS04775 () | 919294..919773 | + | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
| AYM36_RS04780 () | 919773..920546 | + | 774 | WP_001288247.1 | AAA family ATPase | - |
| AYM36_RS04785 () | 920577..921131 | + | 555 | WP_050961188.1 | single-stranded DNA-binding protein | - |
| AYM36_RS04790 () | 921144..921809 | + | 666 | WP_050961189.1 | hypothetical protein | - |
| AYM36_RS04795 () | 921809..922591 | + | 783 | WP_050961190.1 | AP2 domain-containing protein | - |
| AYM36_RS04800 () | 922563..923378 | + | 816 | WP_050961191.1 | phage replisome organizer N-terminal domain-containing protein | - |
| AYM36_RS04805 () | 923388..924167 | + | 780 | WP_050961192.1 | ATP-binding protein | - |
| AYM36_RS15895 () | 924161..924322 | + | 162 | WP_000237153.1 | hypothetical protein | - |
| AYM36_RS04815 () | 924335..924556 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
| AYM36_RS04820 () | 924566..924973 | + | 408 | WP_031898212.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AYM36_RS04825 () | 924973..925158 | + | 186 | WP_031898213.1 | DUF3113 family protein | - |
| AYM36_RS04830 () | 925159..925776 | + | 618 | WP_050961193.1 | hypothetical protein | - |
| AYM36_RS04835 () | 925777..926025 | + | 249 | WP_050961194.1 | phi PVL orf 51-like protein | - |
| AYM36_RS04840 () | 926039..926425 | + | 387 | WP_000693615.1 | hypothetical protein | - |
| AYM36_RS04850 () | 926613..927038 | + | 426 | WP_050961195.1 | hypothetical protein | - |
| AYM36_RS04855 () | 927052..927561 | + | 510 | WP_050961196.1 | hypothetical protein | - |
| AYM36_RS04860 () | 927627..927888 | + | 262 | Protein_894 | hypothetical protein | - |
| AYM36_RS04865 () | 927881..928129 | + | 249 | WP_001065056.1 | DUF1024 family protein | - |
| AYM36_RS04870 () | 928122..928652 | + | 531 | WP_000185662.1 | dUTPase | - |
| AYM36_RS04875 () | 928689..928895 | + | 207 | WP_031764620.1 | DUF1381 domain-containing protein | - |
| AYM36_RS04880 () | 928892..929065 | + | 174 | WP_031924097.1 | transcriptional activator RinB | - |
| AYM36_RS04885 () | 929066..929212 | + | 147 | WP_000990005.1 | hypothetical protein | - |
| AYM36_RS04890 () | 929227..929646 | + | 420 | WP_000058632.1 | transcriptional regulator | - |
| AYM36_RS04895 () | 929833..930273 | + | 441 | WP_001003271.1 | terminase small subunit | - |
| AYM36_RS04900 () | 930260..931537 | + | 1278 | WP_000169945.1 | PBSX family phage terminase large subunit | - |
| AYM36_RS04905 () | 931548..933083 | + | 1536 | WP_000921887.1 | phage portal protein | - |
| AYM36_RS04910 () | 933090..934085 | + | 996 | WP_001813737.1 | minor capsid protein | - |
| AYM36_RS15900 () | 934158..934307 | + | 150 | WP_031898218.1 | hypothetical protein | - |
| AYM36_RS04920 () | 934416..935036 | + | 621 | WP_031925652.1 | DUF4355 domain-containing protein | - |
| AYM36_RS04925 () | 935050..936024 | + | 975 | WP_000438500.1 | phage major capsid protein | - |
| AYM36_RS04930 () | 936046..936333 | + | 288 | WP_001114085.1 | hypothetical protein | - |
| AYM36_RS04935 () | 936342..936674 | + | 333 | WP_000208959.1 | phage head-tail connector protein | - |
| AYM36_RS04940 () | 936671..936973 | + | 303 | WP_031880723.1 | hypothetical protein | - |
| AYM36_RS04945 () | 936973..937320 | + | 348 | WP_001017815.1 | HK97 gp10 family phage protein | - |
| AYM36_RS04950 () | 937332..937715 | + | 384 | WP_000188640.1 | hypothetical protein | - |
| AYM36_RS04955 () | 937734..938315 | + | 582 | WP_031898198.1 | phage major tail protein, TP901-1 family | - |
| AYM36_RS04960 () | 938377..938742 | + | 366 | WP_031898197.1 | tail assembly chaperone | - |
| AYM36_RS04965 () | 938772..939116 | + | 345 | WP_001599101.1 | hypothetical protein | - |
| AYM36_RS04970 () | 939133..942600 | + | 3468 | WP_077445412.1 | hypothetical protein | - |
| AYM36_RS04975 () | 942613..943560 | + | 948 | WP_031898192.1 | phage tail family protein | - |
| AYM36_RS04980 () | 943569..945470 | + | 1902 | WP_000156414.1 | phage tail protein | - |
| AYM36_RS04985 () | 945485..947395 | + | 1911 | WP_050961198.1 | hypothetical protein | - |
| AYM36_RS04990 () | 947395..949218 | + | 1824 | WP_050961199.1 | phage baseplate upper protein | - |
| AYM36_RS04995 () | 949218..949595 | + | 378 | WP_031844790.1 | DUF2977 domain-containing protein | - |
| AYM36_RS05000 () | 949599..949772 | + | 174 | WP_000782200.1 | XkdX family protein | - |
| AYM36_RS05005 () | 949812..950111 | + | 300 | WP_000466777.1 | DUF2951 domain-containing protein | - |
| AYM36_RS05010 () | 950248..952146 | + | 1899 | WP_050961200.1 | hypothetical protein | VF |
| AYM36_RS05015 () | 952159..953397 | + | 1239 | WP_031890881.1 | BppU family phage baseplate upper protein | - |
| AYM36_RS05020 () | 953403..953798 | + | 396 | WP_031890882.1 | hypothetical protein | - |
| AYM36_RS05025 () | 953854..954291 | + | 438 | WP_000354119.1 | phage holin | - |
| AYM36_RS05030 () | 954272..955717 | + | 1446 | WP_050961201.1 | SH3 domain-containing protein | - |
| AYM36_RS05035 () | 955853..956044 | + | 192 | WP_050961202.1 | hypothetical protein | - |
| AYM36_RS05045 () | 956497..956634 | + | 138 | WP_001790198.1 | chorismate mutase | - |
| AYM36_RS05050 () | 956640..956954 | - | 315 | WP_000274029.1 | hypothetical protein | - |
| AYM36_RS05055 () | 957319..958359 | + | 1041 | WP_000582332.1 | HlyC/CorC family transporter | - |
| AYM36_RS05060 () | 958373..959440 | + | 1068 | WP_000267247.1 | nitronate monooxygenase family protein | - |
| AYM36_RS05065 () | 959507..959605 | + | 99 | WP_001791752.1 | hypothetical protein | - |
| AYM36_RS05070 () | 959653..960501 | + | 849 | WP_000608129.1 | DUF72 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|