MGE detailed information
MGE type: Prophage MGE length: 87864 bp
Accession: NZ_CP014384 Location: 877765..965628 Organism: Staphylococcus aureus strain USA300-SUR7 Replicon: chromosome
Accession: NZ_CP014384 Location: 877765..965628 Organism: Staphylococcus aureus strain USA300-SUR7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM20_RS04425 () | 872865..875666 | + | 2802 | WP_001056223.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| AYM20_RS04430 () | 875887..877413 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| AYM20_RS04435 () | 877765..878787 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| AYM20_RS04440 () | 879122..879592 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| AYM20_RS04445 () | 879933..880619 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| AYM20_RS04450 () | 880976..881176 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| AYM20_RS04455 () | 881672..881890 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| AYM20_RS04460 () | 881952..882236 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| AYM20_RS04465 () | 882324..882893 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| AYM20_RS04470 () | 883081..883269 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| AYM20_RS04475 () | 883298..883558 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| AYM20_RS04480 () | 883899..884102 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| AYM20_RS04485 () | 884099..884335 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| AYM20_RS04490 () | 884560..885141 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| AYM20_RS04495 () | 885214..885831 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| AYM20_RS04500 () | 885986..886480 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| AYM20_RS04505 () | 886879..887301 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| AYM20_RS04510 () | 887449..888165 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| AYM20_RS04515 () | 888248..888787 | + | 540 | WP_000422909.1 | nitroreductase | - |
| AYM20_RS04520 () | 888937..889257 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| AYM20_RS04525 () | 889401..889757 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| AYM20_RS04530 () | 889915..890295 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| AYM20_RS04540 () | 890474..891352 | + | 879 | WP_000932219.1 | DUF1963 domain-containing protein | - |
| AYM20_RS04550 () | 892094..892480 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| AYM20_RS04555 () | 892473..892769 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| AYM20_RS04560 () | 893019..894044 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| AYM20_RS04565 () | 894037..894732 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| AYM20_RS04570 () | 894750..895571 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| AYM20_RS04575 () | 895714..896934 | - | 1221 | WP_000266158.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AYM20_RS04580 () | 897022..897750 | - | 729 | WP_000734020.1 | Enterotoxin type A | VF |
| AYM20_RS04585 () | 897774..898502 | - | 729 | WP_001033321.1 | Enterotoxin type A | VF |
| AYM20_RS04590 () | 898519..898977 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AYM20_RS04595 () | 898989..899321 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| AYM20_RS04600 () | 899514..899777 | + | 264 | WP_000243849.1 | helix-turn-helix domain-containing protein | - |
| AYM20_RS04605 () | 899770..900042 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| AYM20_RS04610 () | 900054..900227 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| AYM20_RS04615 () | 900194..900397 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| AYM20_RS04620 () | 900399..900782 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| AYM20_RS04625 () | 900783..901031 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| AYM20_RS04630 () | 901123..903495 | + | 2373 | WP_000985235.1 | primase | - |
| AYM20_RS04635 () | 904166..904510 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| AYM20_RS04640 () | 904735..904941 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| AYM20_RS04645 () | 904928..905986 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| AYM20_RS04650 () | 906170..906661 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| AYM20_RS04655 () | 906661..906813 | + | 153 | Protein_862 | terminase small subunit | - |
| AYM20_RS04665 () | 907090..908058 | + | 969 | WP_000801979.1 | Abi family protein | - |
| AYM20_RS04670 () | 908293..908847 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
| AYM20_RS04680 () | 909881..910075 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| AYM20_RS04685 () | 910308..911159 | - | 852 | WP_119875170.1 | DUF368 domain-containing protein | - |
| AYM20_RS04690 () | 911487..912248 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| AYM20_RS04695 () | 912346..913653 | + | 1308 | WP_000205572.1 | Fe-S cluster assembly protein SufD | - |
| AYM20_RS04700 () | 913759..915009 | + | 1251 | WP_001006454.1 | cysteine desulfurase | - |
| AYM20_RS04705 () | 914999..915463 | + | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| AYM20_RS04710 () | 915614..917011 | + | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| AYM20_RS04715 () | 917079..918128 | - | 1050 | WP_050961182.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AYM20_RS04720 () | 918190..918705 | - | 516 | WP_050961183.1 | hypothetical protein | - |
| AYM20_RS04725 () | 918709..919209 | - | 501 | WP_000896616.1 | hypothetical protein | - |
| AYM20_RS04730 () | 919257..919931 | - | 675 | WP_050961185.1 | XRE family transcriptional regulator | - |
| AYM20_RS04735 () | 920123..920362 | + | 240 | WP_001014907.1 | helix-turn-helix transcriptional regulator | - |
| AYM20_RS04740 () | 920378..920581 | + | 204 | WP_050961186.1 | hypothetical protein | - |
| AYM20_RS04745 () | 920769..921560 | + | 792 | WP_050961187.1 | phage antirepressor KilAC domain-containing protein | - |
| AYM20_RS04750 () | 921561..921785 | + | 225 | WP_000187184.1 | hypothetical protein | - |
| AYM20_RS04755 () | 921825..922274 | + | 450 | WP_025920885.1 | hypothetical protein | - |
| AYM20_RS04760 () | 922288..922509 | + | 222 | WP_000977378.1 | hypothetical protein | - |
| AYM20_RS04765 () | 922502..922669 | + | 168 | WP_000066013.1 | DUF1270 domain-containing protein | - |
| AYM20_RS04770 () | 922670..922990 | + | 321 | WP_033843163.1 | hypothetical protein | - |
| AYM20_RS04775 () | 923084..923344 | + | 261 | WP_000291075.1 | hypothetical protein ; Integrase | Integrase |
| AYM20_RS04780 () | 923352..923588 | + | 237 | WP_000802315.1 | hypothetical protein | - |
| AYM20_RS04785 () | 923581..924060 | + | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
| AYM20_RS04790 () | 924060..924833 | + | 774 | WP_001288247.1 | AAA family ATPase | - |
| AYM20_RS04795 () | 924864..925418 | + | 555 | WP_050961188.1 | single-stranded DNA-binding protein | - |
| AYM20_RS04800 () | 925431..926096 | + | 666 | WP_050961189.1 | hypothetical protein | - |
| AYM20_RS04805 () | 926096..926878 | + | 783 | WP_050961190.1 | AP2 domain-containing protein | - |
| AYM20_RS04810 () | 926850..927665 | + | 816 | WP_050961191.1 | phage replisome organizer N-terminal domain-containing protein | - |
| AYM20_RS04815 () | 927675..928454 | + | 780 | WP_050961192.1 | ATP-binding protein | - |
| AYM20_RS15720 () | 928448..928609 | + | 162 | WP_000237153.1 | hypothetical protein | - |
| AYM20_RS04820 () | 928622..928843 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
| AYM20_RS04825 () | 928853..929260 | + | 408 | WP_031898212.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AYM20_RS04830 () | 929260..929445 | + | 186 | WP_031898213.1 | DUF3113 family protein | - |
| AYM20_RS04835 () | 929446..930063 | + | 618 | WP_050961193.1 | hypothetical protein | - |
| AYM20_RS04840 () | 930064..930312 | + | 249 | WP_050961194.1 | phi PVL orf 51-like protein | - |
| AYM20_RS04845 () | 930326..930712 | + | 387 | WP_000693615.1 | hypothetical protein | - |
| AYM20_RS04855 () | 930900..931325 | + | 426 | WP_050961195.1 | hypothetical protein | - |
| AYM20_RS04860 () | 931339..931848 | + | 510 | WP_050961196.1 | hypothetical protein | - |
| AYM20_RS04865 () | 931914..932175 | + | 262 | Protein_902 | hypothetical protein | - |
| AYM20_RS04870 () | 932168..932416 | + | 249 | WP_001065056.1 | DUF1024 family protein | - |
| AYM20_RS04875 () | 932409..932939 | + | 531 | WP_000185662.1 | dUTPase | - |
| AYM20_RS04880 () | 932976..933182 | + | 207 | WP_031764620.1 | DUF1381 domain-containing protein | - |
| AYM20_RS04885 () | 933179..933352 | + | 174 | WP_031924097.1 | transcriptional activator RinB | - |
| AYM20_RS04890 () | 933353..933499 | + | 147 | WP_000990005.1 | hypothetical protein | - |
| AYM20_RS04895 () | 933514..933933 | + | 420 | WP_000058632.1 | transcriptional regulator | - |
| AYM20_RS04900 () | 934120..934560 | + | 441 | WP_001003271.1 | terminase small subunit | - |
| AYM20_RS04905 () | 934547..935824 | + | 1278 | WP_000169945.1 | PBSX family phage terminase large subunit | - |
| AYM20_RS04910 () | 935835..937370 | + | 1536 | WP_000921887.1 | phage portal protein | - |
| AYM20_RS04915 () | 937377..938372 | + | 996 | WP_001813737.1 | minor capsid protein | - |
| AYM20_RS15725 () | 938445..938594 | + | 150 | WP_031898218.1 | hypothetical protein | - |
| AYM20_RS04920 () | 938703..939323 | + | 621 | WP_031925652.1 | DUF4355 domain-containing protein | - |
| AYM20_RS04925 () | 939337..940311 | + | 975 | WP_000438500.1 | phage major capsid protein | - |
| AYM20_RS04930 () | 940333..940620 | + | 288 | WP_001114085.1 | hypothetical protein | - |
| AYM20_RS04935 () | 940629..940961 | + | 333 | WP_000208959.1 | phage head-tail connector protein | - |
| AYM20_RS04940 () | 940958..941260 | + | 303 | WP_031880723.1 | hypothetical protein | - |
| AYM20_RS04945 () | 941260..941607 | + | 348 | WP_001017815.1 | HK97 gp10 family phage protein | - |
| AYM20_RS04950 () | 941619..942002 | + | 384 | WP_000188640.1 | hypothetical protein | - |
| AYM20_RS04955 () | 942021..942602 | + | 582 | WP_031898198.1 | phage major tail protein, TP901-1 family | - |
| AYM20_RS04960 () | 942664..943029 | + | 366 | WP_031898197.1 | tail assembly chaperone | - |
| AYM20_RS04965 () | 943059..943403 | + | 345 | WP_001599101.1 | hypothetical protein | - |
| AYM20_RS04970 () | 943420..946887 | + | 3468 | WP_050961197.1 | hypothetical protein | - |
| AYM20_RS04975 () | 946900..947847 | + | 948 | WP_031898192.1 | phage tail family protein | - |
| AYM20_RS04980 () | 947856..949757 | + | 1902 | WP_000156414.1 | phage tail protein | - |
| AYM20_RS04985 () | 949772..951682 | + | 1911 | WP_050961198.1 | hypothetical protein | - |
| AYM20_RS04990 () | 951682..953505 | + | 1824 | WP_050961199.1 | phage baseplate upper protein | - |
| AYM20_RS04995 () | 953505..953882 | + | 378 | WP_031844790.1 | DUF2977 domain-containing protein | - |
| AYM20_RS05000 () | 953886..954059 | + | 174 | Protein_930 | XkdX family protein | - |
| AYM20_RS05005 () | 954099..954398 | + | 300 | WP_000466777.1 | DUF2951 domain-containing protein | - |
| AYM20_RS05010 () | 954535..956433 | + | 1899 | WP_050961200.1 | Bifunctional autolysin | VF |
| AYM20_RS05015 () | 956446..957684 | + | 1239 | WP_031890881.1 | BppU family phage baseplate upper protein | - |
| AYM20_RS05020 () | 957690..958085 | + | 396 | WP_031890882.1 | hypothetical protein | - |
| AYM20_RS05025 () | 958141..958578 | + | 438 | WP_000354119.1 | phage holin | - |
| AYM20_RS05030 () | 958559..960004 | + | 1446 | WP_050961201.1 | SH3 domain-containing protein | - |
| AYM20_RS05035 () | 960140..960331 | + | 192 | WP_050961202.1 | hypothetical protein | - |
| AYM20_RS05045 () | 960784..960921 | + | 138 | WP_001790198.1 | chorismate mutase | - |
| AYM20_RS05050 () | 960927..961241 | - | 315 | WP_000274029.1 | hypothetical protein | - |
| AYM20_RS05055 () | 961606..962646 | + | 1041 | WP_000582332.1 | HlyC/CorC family transporter | - |
| AYM20_RS05060 () | 962660..963727 | + | 1068 | WP_000267247.1 | nitronate monooxygenase family protein | - |
| AYM20_RS05065 () | 963794..963892 | + | 99 | WP_001791752.1 | hypothetical protein | - |
| AYM20_RS05070 () | 963940..964788 | + | 849 | WP_000608129.1 | DUF72 domain-containing protein | - |
| AYM20_RS05075 () | 964801..965628 | + | 828 | WP_000927632.1 | sulfite exporter TauE/SafE family protein | - |
| AYM20_RS05080 () | 965655..966974 | + | 1320 | WP_001241217.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| AYM20_RS05085 () | 967058..967975 | + | 918 | WP_000201875.1 | lipoyl synthase | - |
| AYM20_RS05090 () | 968105..968488 | + | 384 | WP_000598444.1 | YutD family protein | - |
| AYM20_RS05095 () | 968567..968833 | - | 267 | WP_000566649.1 | DUF3055 domain-containing protein | - |
| AYM20_RS05100 () | 968931..969365 | + | 435 | WP_000273981.1 | DUF86 domain-containing protein | - |
| AYM20_RS05105 () | 969365..970144 | + | 780 | WP_000816184.1 | TIGR01457 family HAD-type hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|