MGE detailed information
MGE type: Prophage MGE length: 32666 bp
Accession: NZ_CP014099 Location: 2385785..2418450 Organism: Shigella sonnei strain FDAARGOS_90 Replicon: chromosome
Accession: NZ_CP014099 Location: 2385785..2418450 Organism: Shigella sonnei strain FDAARGOS_90 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL477_RS13025 (2381177) | 2381177..2381530 | - | 354 | WP_000878140.1 | DUF1428 domain-containing protein | - |
| AL477_RS13035 (2381909) | 2381909..2382220 | + | 312 | WP_000409911.1 | MGMT family protein | - |
| AL477_RS13040 (2382251) | 2382251..2382823 | - | 573 | WP_000779812.1 | YbaY family lipoprotein | - |
| AL477_RS13045 (2383041) | 2383041..2383901 | + | 861 | WP_000075876.1 | acyl-CoA thioesterase II | - |
| AL477_RS13050 (2383950) | 2383950..2385236 | - | 1287 | WP_000685029.1 | ammonium transporter AmtB | - |
| AL477_RS13055 (2385266) | 2385266..2385604 | - | 339 | WP_000780338.1 | P-II family nitrogen regulator | - |
| AL477_RS13060 (2385785) | 2385785..2387566 | - | 1782 | WP_001256217.1 | SmdB family multidrug efflux ABC transporter permease/ATP-binding protein | - |
| AL477_RS13065 (2387559) | 2387559..2389331 | - | 1773 | WP_001235578.1 | SmdA family multidrug ABC transporter permease/ATP-binding protein | - |
| AL477_RS13070 (2389361) | 2389361..2389819 | - | 459 | WP_000884589.1 | DNA-binding transcriptional regulator DecR | - |
| AL477_RS13075 (2389971) | 2389971..2390789 | - | 819 | WP_000113027.1 | HMP-PP phosphatase | - |
| AL477_RS13080 (2390889) | 2390889..2392589 | + | 1701 | WP_001238215.1 | SgrR family transcriptional regulator | - |
| AL477_RS13085 (2392654) | 2392654..2393349 | + | 696 | WP_000817229.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| AL477_RS13090 (2393401) | 2393401..2393799 | - | 399 | WP_001194534.1 | long-chain acyl-CoA thioesterase FadM | - |
| AL477_RS13095 (2393893) | 2393893..2394225 | - | 333 | WP_049792794.1 | helix-hairpin-helix domain-containing protein | - |
| AL477_RS13100 (2394206) | 2394206..2394409 | - | 204 | Protein_2401 | IS3 family transposase IS600 | Transposase |
| AL477_RS13105 (2394513) | 2394513..2395685 | + | 1173 | WP_000952382.1 | IS21 family transposase IS21 | Transposase |
| AL477_RS13110 (2395685) | 2395685..2396482 | + | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| AL477_RS13115 (2396532) | 2396532..2397496 | - | 965 | Protein_2404 | IS3 family transposase ISSd1 | Transposase |
| AL477_RS26295 (2397561) | 2397561..2397665 | - | 105 | Protein_2405 | hypothetical protein | - |
| AL477_RS13120 (2397816) | 2397816..2399687 | - | 1872 | WP_000969372.1 | Peptidyl-prolyl cis-trans isomerase D | VF |
| AL477_RS13125 (2399879) | 2399879..2400151 | - | 273 | WP_001043542.1 | nucleoid-associated protein HU-beta | - |
| AL477_RS13130 (2400360) | 2400360..2402714 | - | 2355 | WP_001295325.1 | endopeptidase La | - |
| AL477_RS13135 (2402902) | 2402902..2404176 | - | 1275 | WP_000130305.1 | ATP-dependent protease ATP-binding subunit ClpX | - |
| AL477_RS13140 (2404302) | 2404302..2404925 | - | 624 | WP_000122253.1 | hypothetical protein | VF |
| AL477_RS13145 (2405171) | 2405171..2406469 | - | 1299 | WP_001198386.1 | trigger factor | - |
| AL477_RS13150 (2406813) | 2406813..2407130 | - | 318 | WP_000973448.1 | transcriptional regulator BolA | - |
| AL477_RS13155 (2407435) | 2407435..2408013 | + | 579 | WP_001295326.1 | lipoprotein | - |
| AL477_RS13160 (2408057) | 2408057..2409532 | + | 1476 | WP_000098441.1 | muropeptide MFS transporter AmpG | - |
| AL477_RS13165 (2409993) | 2409993..2410940 | + | 948 | WP_001239441.1 | cytochrome o ubiquinol oxidase subunit II | - |
| AL477_RS13170 (2410962) | 2410962..2412953 | + | 1992 | WP_000467180.1 | cytochrome o ubiquinol oxidase subunit I | - |
| AL477_RS13175 (2412943) | 2412943..2413557 | + | 615 | WP_000179819.1 | cytochrome o ubiquinol oxidase subunit III | - |
| AL477_RS13180 (2413557) | 2413557..2413886 | + | 330 | WP_000019869.1 | cytochrome o ubiquinol oxidase subunit IV | - |
| AL477_RS13185 (2413898) | 2413898..2414788 | + | 891 | WP_000971327.1 | heme o synthase | - |
| AL477_RS13190 (2414973) | 2414973..2415284 | + | 312 | WP_001297137.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AL477_RS13195 (2415268) | 2415268..2415810 | + | 543 | WP_000227784.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AL477_RS13200 (2415866) | 2415866..2416432 | - | 567 | Protein_2422 | SEL1-like repeat protein | - |
| AL477_RS13205 (2416466) | 2416466..2417163 | + | 698 | WP_237158184.1 | IS1-like element IS1A family transposase | - |
| AL477_RS13210 (2417180) | 2417180..2417578 | - | 399 | Protein_2424 | SEL1-like repeat protein | - |
| AL477_RS13220 (2418763) | 2418763..2420127 | + | 1365 | WP_001000971.1 | MFS transporter | - |
| AL477_RS13225 (2420255) | 2420255..2420746 | - | 492 | WP_001138904.1 | nucleotide binding protein YajQ | - |
| AL477_RS13230 (2420914) | 2420914..2421825 | + | 912 | WP_000705865.1 | 2-dehydropantoate 2-reductase | - |
| AL477_RS13235 (2421788) | 2421788..2422378 | + | 591 | WP_001276310.1 | protein deglycase YajL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|