MGE detailed information
MGE type: Genomic_island MGE length: 67876 bp
Accession: NZ_CP013835 Location: 3346308..3414183 Organism: Escherichia coli strain JJ2434 Replicon: chromosome
Accession: NZ_CP013835 Location: 3346308..3414183 Organism: Escherichia coli strain JJ2434 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVR68_RS30340 () | 3341981..3342124 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| AVR68_RS17905 () | 3342374..3346261 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| AVR68_RS17910 () | 3346533..3346793 | + | 261 | Protein_3227 | IS3 family transposase ISSfl10 | Transposase |
| AVR68_RS17915 () | 3346858..3348009 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| AVR68_RS17920 () | 3348022..3348912 | + | 891 | Protein_3229 | IS3 family transposase ISSd1 | Transposase |
| AVR68_RS17925 () | 3348957..3349379 | + | 423 | Protein_3230 | hypothetical protein | - |
| AVR68_RS29385 () | 3349795..3351327 | + | 1533 | Protein_3231 | IS3 family transposase | - |
| AVR68_RS28185 () | 3351361..3351870 | - | 510 | Protein_3232 | L-lactate permease | - |
| AVR68_RS28190 () | 3351890..3352212 | + | 323 | Protein_3233 | IS110 family transposase | - |
| AVR68_RS17955 () | 3352790..3353005 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| AVR68_RS17960 () | 3353009..3353368 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| AVR68_RS17970 () | 3353659..3353901 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| AVR68_RS30025 () | 3354386..3354545 | + | 160 | Protein_3237 | transposase domain-containing protein | - |
| AVR68_RS17980 () | 3354763..3356853 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| AVR68_RS17990 () | 3357247..3357672 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| AVR68_RS17995 () | 3357669..3358019 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| AVR68_RS18000 () | 3358050..3359663 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| AVR68_RS18020 () | 3361273..3362259 | - | 987 | WP_000274668.1 | hypothetical protein | - |
| AVR68_RS18025 () | 3362359..3363093 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| AVR68_RS18030 () | 3363129..3364063 | - | 935 | Protein_3245 | alpha/beta hydrolase | - |
| AVR68_RS18035 () | 3364113..3365222 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| AVR68_RS18040 () | 3365235..3365945 | - | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| AVR68_RS18045 () | 3365991..3366821 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| AVR68_RS18050 () | 3366825..3368297 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| AVR68_RS18055 () | 3368346..3369221 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| AVR68_RS18060 () | 3369255..3370172 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| AVR68_RS28210 () | 3370324..3370461 | + | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| AVR68_RS18075 () | 3370833..3371258 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| AVR68_RS18080 () | 3371255..3371605 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| AVR68_RS18085 () | 3371636..3372733 | + | 1098 | Protein_3255 | IS66 family transposase IS682 | Transposase |
| AVR68_RS18090 () | 3372733..3374271 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| AVR68_RS30030 () | 3374310..3374495 | - | 186 | Protein_3257 | hypothetical protein | - |
| AVR68_RS18100 () | 3374492..3374875 | - | 384 | WP_000271011.1 | hypothetical protein | - |
| AVR68_RS18105 () | 3375042..3375611 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| AVR68_RS28215 () | 3375810..3376007 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| AVR68_RS18115 () | 3376340..3376489 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| AVR68_RS30040 () | 3377437..3377643 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| AVR68_RS18125 () | 3377729..3378301 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| AVR68_RS18130 () | 3378422..3379912 | - | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| AVR68_RS18140 () | 3381244..3382116 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| AVR68_RS18145 () | 3382450..3385572 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| AVR68_RS18150 () | 3385667..3386794 | + | 1128 | Protein_3267 | hypothetical protein | - |
| AVR68_RS18155 () | 3386870..3387325 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| AVR68_RS18160 () | 3387404..3387637 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| AVR68_RS18165 () | 3387738..3388556 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| AVR68_RS18170 () | 3388611..3389096 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| AVR68_RS18175 () | 3389112..3389588 | + | 477 | WP_001186726.1 | RadC family protein | - |
| AVR68_RS18180 () | 3389651..3389872 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| AVR68_RS18185 () | 3389891..3390535 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| AVR68_RS18190 () | 3390585..3390953 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AVR68_RS18195 () | 3391042..3391419 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| AVR68_RS18200 () | 3391416..3391904 | + | 489 | WP_000761699.1 | hypothetical protein | - |
| AVR68_RS18205 () | 3391921..3392118 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| AVR68_RS18210 () | 3392203..3393048 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| AVR68_RS18215 () | 3393117..3393512 | + | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| AVR68_RS18220 () | 3393505..3394438 | + | 934 | Protein_3281 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| AVR68_RS30345 () | 3394870..3395025 | + | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| AVR68_RS18235 () | 3395836..3396827 | + | 992 | Protein_3283 | Inosine-5'-monophosphate dehydrogenase | VF |
| AVR68_RS18240 () | 3396899..3398047 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| AVR68_RS18245 () | 3398071..3399747 | + | 1677 | WP_001305083.1 | hypothetical protein | VF |
| AVR68_RS18250 () | 3399757..3400497 | + | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| AVR68_RS18255 () | 3400494..3402521 | + | 2028 | WP_000579513.1 | hypothetical protein | VF |
| AVR68_RS18260 () | 3402556..3403725 | + | 1170 | WP_001161856.1 | hypothetical protein | VF |
| AVR68_RS18265 () | 3404064..3405242 | - | 1179 | WP_001305084.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| AVR68_RS18270 () | 3405284..3406846 | - | 1563 | WP_001305085.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| AVR68_RS29405 () | 3407007..3408041 | + | 1035 | Protein_3291 | IS481 family transposase | - |
| AVR68_RS18280 () | 3408138..3409826 | - | 1689 | WP_022645101.1 | hypothetical protein | VF |
| AVR68_RS18285 () | 3410261..3410977 | - | 717 | WP_000634338.1 | hypothetical protein | - |
| AVR68_RS30045 () | 3411428..3411584 | - | 157 | Protein_3294 | transposase | - |
| AVR68_RS18290 () | 3411962..3412627 | - | 666 | WP_059219430.1 | hypothetical protein | VF |
| AVR68_RS18295 () | 3412818..3414080 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| AVR68_RS18305 () | 3414336..3415211 | + | 876 | WP_000239590.1 | class A extended-spectrum beta-lactamase CTX-M-15 | - |
| AVR68_RS18310 () | 3415258..3415590 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AVR68_RS18315 () | 3415609..3416385 | - | 777 | WP_000124287.1 | ABC transporter permease | - |
| AVR68_RS18320 () | 3417443..3417979 | - | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| AVR68_RS18325 () | 3417981..3419159 | - | 1179 | WP_000095005.1 | type II secretion system protein GspL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|