MGE detailed information
MGE type: Genomic_island MGE length: 48157 bp
Accession: NZ_CP013831 Location: 316122..364278 Organism: Escherichia coli strain CD306 Replicon: chromosome
Accession: NZ_CP013831 Location: 316122..364278 Organism: Escherichia coli strain CD306 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVR67_RS01495 () | 312387..313490 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| AVR67_RS01500 () | 313502..314755 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| AVR67_RS29590 () | 314960..315163 | - | 204 | Protein_293 | integrase | - |
| AVR67_RS01510 () | 315309..315779 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| AVR67_RS26430 () | 315757..315942 | - | 186 | WP_101918754.1 | ash family protein | - |
| AVR67_RS01515 () | 316122..317369 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| AVR67_RS01520 () | 317359..318996 | - | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| AVR67_RS01525 () | 318990..322088 | - | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| AVR67_RS01530 () | 322372..323154 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| AVR67_RS01535 () | 323141..324061 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| AVR67_RS26435 () | 324226..325545 | - | 1320 | Protein_301 | Prophage integrase IntA ; Integrase | Integrase |
| AVR67_RS29420 () | 325772..325930 | - | 159 | Protein_302 | integrase | - |
| AVR67_RS01550 () | 325979..326164 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| AVR67_RS01555 () | 326379..326993 | + | 615 | WP_001019923.1 | YagU family protein | - |
| AVR67_RS26445 () | 327067..327230 | + | 164 | Protein_305 | tail fiber assembly protein | - |
| AVR67_RS01560 () | 327242..327571 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| AVR67_RS01565 () | 327878..328588 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| AVR67_RS01570 () | 328557..330200 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| AVR67_RS01575 () | 330190..332715 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| AVR67_RS01580 () | 332741..333409 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| AVR67_RS01585 () | 333466..334053 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| AVR67_RS01590 () | 334128..334670 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| AVR67_RS28230 () | 335494..335684 | + | 191 | Protein_313 | hypothetical protein | - |
| AVR67_RS01595 () | 335754..335894 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| AVR67_RS01600 () | 335894..336157 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| AVR67_RS01605 () | 336522..336623 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| AVR67_RS01610 () | 337096..338238 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| AVR67_RS01615 () | 338411..339331 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| AVR67_RS01620 () | 339488..340414 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| AVR67_RS01625 () | 340614..341507 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| AVR67_RS01630 () | 341538..342527 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| AVR67_RS01635 () | 342554..343405 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| AVR67_RS01640 () | 343971..348218 | + | 4248 | WP_000092552.1 | Invasin | VF |
| AVR67_RS01645 () | 348343..349200 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| AVR67_RS01650 () | 349448..350317 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| AVR67_RS01655 () | 350477..351070 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| AVR67_RS01660 () | 351082..351318 | - | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| AVR67_RS01665 () | 351427..352752 | - | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| AVR67_RS01670 () | 352979..353833 | + | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| AVR67_RS01675 () | 354359..355078 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| AVR67_RS01680 () | 355089..356516 | + | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| AVR67_RS01685 () | 356509..357204 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| AVR67_RS01695 () | 357447..358115 | - | 669 | WP_001005267.1 | membrane protein | - |
| AVR67_RS28850 () | 358299..359492 | - | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| AVR67_RS28855 () | 359514..360590 | - | 1077 | Protein_335 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| AVR67_RS01705 () | 360632..361393 | - | 762 | WP_001213045.1 | protein HyxA | - |
| AVR67_RS01710 () | 361547..362341 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| AVR67_RS01715 () | 362671..363234 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| AVR67_RS01725 () | 364320..365990 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| AVR67_RS01730 () | 366004..367476 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| AVR67_RS01735 () | 367490..368077 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|