MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33533 bp
Accession: NZ_CP013805 Location: 1..33533 Organism: Piscirickettsia salmonis strain PM22180B Replicon: plasmid p4PS13
Accession: NZ_CP013805 Location: 1..33533 Organism: Piscirickettsia salmonis strain PM22180B Replicon: plasmid p4PS13
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVM70_RS17950 () | 6..977 | - | 972 | Protein_0 | IS30 family transposase IS4351 | Transposase |
| AVM70_RS17960 () | 1154..1507 | - | 354 | WP_016211078.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVM70_RS17965 () | 1500..1760 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVM70_RS17970 () | 1991..2581 | + | 591 | WP_016212329.1 | site-specific integrase | - |
| AVM70_RS20545 () | 2681..2863 | - | 183 | WP_196771749.1 | hypothetical protein | - |
| AVM70_RS20550 () | 2841..2999 | - | 159 | WP_171824215.1 | hypothetical protein | - |
| AVM70_RS17980 () | 3113..4083 | + | 971 | Protein_6 | IS30 family transposase | - |
| AVM70_RS17985 () | 4080..4523 | - | 444 | WP_178099494.1 | IS701 family transposase ISMhu9 | Transposase |
| AVM70_RS17995 () | 5509..6492 | - | 984 | WP_016211499.1 | ParB/RepB/Spo0J family partition protein | - |
| AVM70_RS18000 () | 6508..7485 | - | 978 | WP_027242956.1 | Sporulation initiation inhibitor protein Soj | VF |
| AVM70_RS18005 () | 7715..8764 | + | 1050 | WP_027242957.1 | hypothetical protein | - |
| AVM70_RS18010 () | 8863..9093 | + | 231 | WP_027242958.1 | hypothetical protein | - |
| AVM70_RS18015 () | 9308..10177 | + | 870 | WP_027242959.1 | hypothetical protein | - |
| AVM70_RS18020 () | 10275..11126 | - | 852 | WP_051929859.1 | IS982 family transposase ISPsa1 | Transposase |
| AVM70_RS20555 () | 11348..11527 | + | 180 | WP_144420851.1 | hypothetical protein | - |
| AVM70_RS18030 () | 11744..12714 | - | 971 | Protein_15 | IS30 family transposase | - |
| AVM70_RS18040 () | 12808..13137 | - | 330 | Protein_16 | hypothetical protein | - |
| AVM70_RS19800 () | 13282..13422 | - | 141 | WP_144420852.1 | phosphatase | - |
| AVM70_RS18045 () | 13431..13727 | - | 297 | Protein_18 | hypothetical protein | - |
| AVM70_RS18050 () | 13813..14631 | + | 819 | Protein_19 | IS30 family transposase ISLxc4 | Transposase |
| AVM70_RS19805 () | 14628..14783 | + | 156 | WP_155046571.1 | hypothetical protein | - |
| AVM70_RS19810 () | 14803..14964 | - | 162 | WP_155046645.1 | hypothetical protein | - |
| AVM70_RS18055 () | 14964..15617 | - | 654 | WP_027242941.1 | DUF4376 domain-containing protein | - |
| AVM70_RS18060 () | 15629..16006 | - | 378 | WP_048876242.1 | hypothetical protein | - |
| AVM70_RS18630 () | 16491..17462 | + | 972 | Protein_24 | IS30 family transposase | - |
| AVM70_RS18080 () | 17482..18159 | - | 678 | WP_027242942.1 | hypothetical protein | - |
| AVM70_RS18085 () | 18159..19214 | - | 1056 | WP_062365785.1 | hypothetical protein | - |
| AVM70_RS18090 () | 19359..21335 | - | 1977 | WP_048876241.1 | host specificity protein J | - |
| AVM70_RS18095 () | 21606..22022 | - | 417 | WP_027242943.1 | hypothetical protein | - |
| AVM70_RS18100 () | 22019..22576 | - | 558 | WP_027242944.1 | tail assembly protein | - |
| AVM70_RS18105 () | 22922..23437 | + | 516 | WP_027242945.1 | hypothetical protein | - |
| AVM70_RS18110 () | 23459..24067 | - | 609 | Protein_31 | C40 family peptidase | - |
| AVM70_RS18115 () | 24241..24486 | - | 246 | WP_171824220.1 | phage head-tail connector protein | - |
| AVM70_RS18120 () | 24530..25504 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVM70_RS20560 () | 25562..25717 | - | 156 | WP_168183246.1 | hypothetical protein | - |
| AVM70_RS18125 () | 25885..26466 | + | 582 | WP_027242946.1 | hypothetical protein | - |
| AVM70_RS18130 () | 26502..26894 | - | 393 | WP_075275490.1 | phage major capsid protein | - |
| AVM70_RS18135 () | 26991..27965 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVM70_RS18140 () | 27985..28170 | - | 186 | WP_027242948.1 | hypothetical protein | - |
| AVM70_RS18145 () | 28173..28655 | - | 483 | WP_027242949.1 | P27 family phage terminase small subunit | - |
| AVM70_RS18150 () | 28742..29125 | - | 384 | WP_027242950.1 | HNH endonuclease | - |
| AVM70_RS18155 () | 29338..30204 | - | 867 | WP_027242951.1 | hypothetical protein | - |
| AVM70_RS20565 () | 30452..30598 | + | 147 | WP_169834793.1 | hypothetical protein | - |
| AVM70_RS18160 () | 30830..31804 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVM70_RS18165 () | 31902..32249 | - | 348 | WP_027242952.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVM70_RS18170 () | 32242..32496 | - | 255 | WP_027242953.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVM70_RS18175 () | 32641..33006 | - | 366 | WP_027242954.1 | hypothetical protein | - |
| AVM70_RS18180 () | 33203..33430 | - | 228 | Protein_47 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|