MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33518 bp
Accession: NZ_CP013799 Location: 1..33518 Organism: Piscirickettsia salmonis strain AY6532B Replicon: plasmid p3PS9
Accession: NZ_CP013799 Location: 1..33518 Organism: Piscirickettsia salmonis strain AY6532B Replicon: plasmid p3PS9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI56_RS17845 () | 212..517 | - | 306 | WP_075286767.1 | hypothetical protein | - |
| AVI56_RS17850 () | 624..1179 | - | 556 | Protein_1 | tail assembly protein | - |
| AVI56_RS17855 () | 1524..2039 | + | 516 | WP_027242945.1 | hypothetical protein | - |
| AVI56_RS17860 () | 2061..2666 | - | 606 | Protein_3 | C40 family peptidase | - |
| AVI56_RS17865 () | 2839..3084 | - | 246 | WP_171824220.1 | phage head-tail connector protein | - |
| AVI56_RS17870 () | 3128..4102 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS20610 () | 4160..4315 | - | 156 | WP_168183246.1 | hypothetical protein | - |
| AVI56_RS17875 () | 4483..5064 | + | 582 | WP_027242946.1 | hypothetical protein | - |
| AVI56_RS17880 () | 5100..5492 | - | 393 | WP_075275490.1 | phage major capsid protein | - |
| AVI56_RS17885 () | 5589..6563 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS17890 () | 6583..6768 | - | 186 | WP_027242948.1 | hypothetical protein | - |
| AVI56_RS17895 () | 6771..7253 | - | 483 | WP_027242949.1 | P27 family phage terminase small subunit | - |
| AVI56_RS17900 () | 7340..7723 | - | 384 | WP_027242950.1 | HNH endonuclease | - |
| AVI56_RS17905 () | 7936..8802 | - | 867 | WP_027242951.1 | hypothetical protein | - |
| AVI56_RS20615 () | 9056..9196 | + | 141 | WP_162039123.1 | hypothetical protein | - |
| AVI56_RS17910 () | 9428..10402 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS17915 () | 10500..10847 | - | 348 | WP_027242952.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI56_RS17920 () | 10840..11094 | - | 255 | WP_027242953.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI56_RS17925 () | 11239..11604 | - | 366 | WP_027242954.1 | hypothetical protein | - |
| AVI56_RS17930 () | 11801..12028 | - | 228 | Protein_19 | hypothetical protein | - |
| AVI56_RS17935 () | 12137..13111 | - | 975 | WP_069971681.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS17940 () | 13288..13641 | - | 354 | WP_016211078.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVI56_RS17945 () | 13634..13894 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVI56_RS17950 () | 14125..14715 | + | 591 | WP_016212329.1 | site-specific integrase | - |
| AVI56_RS17955 () | 14781..15137 | - | 357 | WP_075278739.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI56_RS17960 () | 15251..16225 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS17965 () | 16222..16665 | - | 444 | WP_178099494.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI56_RS20620 () | 16870..17145 | - | 276 | WP_171824216.1 | IS701 family transposase ISAba11 | Transposase |
| AVI56_RS17975 () | 17622..18605 | - | 984 | WP_016211499.1 | ParB/RepB/Spo0J family partition protein | - |
| AVI56_RS17980 () | 18621..19598 | - | 978 | WP_027242956.1 | Sporulation initiation inhibitor protein Soj | VF |
| AVI56_RS17985 () | 19828..20877 | + | 1050 | WP_027242957.1 | hypothetical protein | - |
| AVI56_RS17990 () | 20976..21206 | + | 231 | WP_027242958.1 | hypothetical protein | - |
| AVI56_RS17995 () | 21421..22290 | + | 870 | WP_027242959.1 | hypothetical protein | - |
| AVI56_RS18000 () | 22388..23239 | - | 852 | WP_051929859.1 | IS982 family transposase ISPsa1 | Transposase |
| AVI56_RS20625 () | 23692..23880 | + | 189 | WP_146619490.1 | hypothetical protein | - |
| AVI56_RS18010 () | 23857..24831 | - | 975 | WP_036771332.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS18015 () | 24925..25254 | - | 330 | Protein_36 | hypothetical protein | - |
| AVI56_RS19885 () | 25399..25539 | - | 141 | WP_144420852.1 | phosphatase | - |
| AVI56_RS18020 () | 25548..25844 | - | 297 | Protein_38 | hypothetical protein | - |
| AVI56_RS18025 () | 25930..26904 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS19890 () | 26924..27085 | - | 162 | WP_155046645.1 | hypothetical protein | - |
| AVI56_RS18030 () | 27085..27738 | - | 654 | WP_027242941.1 | DUF4376 domain-containing protein | - |
| AVI56_RS18035 () | 27750..28127 | - | 378 | WP_048876242.1 | hypothetical protein | - |
| AVI56_RS18040 () | 28612..29586 | + | 975 | WP_036773116.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS18045 () | 29606..30283 | - | 678 | WP_027242942.1 | hypothetical protein | - |
| AVI56_RS18050 () | 30283..31338 | - | 1056 | WP_062365785.1 | hypothetical protein | - |
| AVI56_RS18055 () | 31483..33459 | - | 1977 | WP_048876241.1 | host specificity protein J | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|