MGE detailed information
MGE type: IS/Tn MGE length: 195 bp
Accession: NZ_CP013789 Location: 50840..51034 Organism: Piscirickettsia salmonis strain PM58386B Replicon: plasmid p3PS7
Accession: NZ_CP013789 Location: 50840..51034 Organism: Piscirickettsia salmonis strain PM58386B Replicon: plasmid p3PS7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI54_RS17930 () | 46086..46934 | - | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
| AVI54_RS17935 () | 46931..47791 | - | 861 | WP_047927060.1 | ParA family protein | - |
| AVI54_RS17940 () | 47781..47990 | - | 210 | WP_047927061.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AVI54_RS17945 () | 48519..48845 | + | 327 | WP_047927062.1 | hypothetical protein | - |
| AVI54_RS17950 () | 48845..49969 | + | 1125 | WP_047927063.1 | hypothetical protein | - |
| AVI54_RS18680 () | 50517..51362 | + | 846 | Protein_54 | IS982 family transposase | - |
| AVI54_RS17970 () | 52066..53469 | + | 1404 | WP_048876031.1 | IS4 family transposase | - |
| AVI54_RS17975 () | 53497..54087 | - | 591 | WP_027242600.1 | site-specific integrase | - |
| AVI54_RS17980 () | 54360..54620 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVI54_RS17985 () | 54624..54896 | + | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVI54_RS17990 () | 55222..55440 | - | 219 | WP_155046644.1 | hypothetical protein | - |
| AVI54_RS17995 () | 55613..55753 | + | 141 | Protein_60 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|