MGE detailed information
MGE type: IScluster/Tn MGE length: 31346 bp
Accession: NZ_CP013787 Location: 54051..85396 Organism: Piscirickettsia salmonis strain PM58386B Replicon: plasmid p1PS7
Accession: NZ_CP013787 Location: 54051..85396 Organism: Piscirickettsia salmonis strain PM58386B Replicon: plasmid p1PS7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI54_RS16560 () | 49813..50028 | - | 216 | WP_027242935.1 | hypothetical protein | - |
| AVI54_RS16565 () | 50171..50623 | - | 453 | WP_027242936.1 | hypothetical protein | - |
| AVI54_RS16570 () | 50620..50838 | - | 219 | WP_027242937.1 | hypothetical protein | - |
| AVI54_RS16575 () | 51145..51354 | - | 210 | WP_017375841.1 | hypothetical protein | - |
| AVI54_RS16585 () | 51799..52107 | - | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| AVI54_RS16590 () | 52109..52477 | - | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVI54_RS16595 () | 52891..53862 | - | 972 | WP_048876229.1 | IS91 family transposase | - |
| AVI54_RS18630 () | 53781..53981 | - | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| AVI54_RS16600 () | 54051..54779 | - | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16605 () | 55139..55915 | + | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AVI54_RS20505 () | 56127..56294 | - | 168 | WP_169834792.1 | hypothetical protein | - |
| AVI54_RS16615 () | 56332..56868 | + | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| AVI54_RS16620 () | 57202..57813 | + | 612 | Protein_76 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS19745 () | 58075..58218 | + | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS19750 () | 58286..58462 | + | 177 | Protein_78 | IS30 family transposase ISAs2 | Transposase |
| AVI54_RS16625 () | 59112..59582 | + | 471 | WP_036771289.1 | hypothetical protein | - |
| AVI54_RS16630 () | 59664..60393 | + | 730 | Protein_80 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16635 () | 60436..61263 | - | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS20510 () | 61676..61855 | + | 180 | WP_157894752.1 | hypothetical protein | - |
| AVI54_RS16650 () | 62035..63099 | + | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI54_RS16655 () | 63668..64396 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16660 () | 64472..64744 | - | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVI54_RS16665 () | 64748..65008 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVI54_RS19755 () | 65348..65512 | + | 165 | Protein_87 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16675 () | 65798..66364 | + | 567 | Protein_88 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16680 () | 66430..67062 | - | 633 | Protein_89 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS19760 () | 67132..67299 | + | 168 | Protein_90 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16690 () | 67350..67556 | - | 207 | Protein_91 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16695 () | 67640..68290 | - | 651 | WP_155046631.1 | hypothetical protein | - |
| AVI54_RS16700 () | 68365..69342 | + | 978 | WP_036771347.1 | IS5 family transposase ISLlo3 | Transposase |
| AVI54_RS16705 () | 69470..70198 | - | 729 | WP_036771359.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16710 () | 70381..71667 | - | 1287 | WP_017375754.1 | hypothetical protein | - |
| AVI54_RS19765 () | 71688..71852 | - | 165 | WP_155046630.1 | hypothetical protein | - |
| AVI54_RS16715 () | 72269..72421 | - | 153 | WP_080999960.1 | IS3 family transposase | - |
| AVI54_RS16720 () | 72489..73217 | - | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS20515 () | 73437..75536 | + | 2100 | WP_075278736.1 | IS6 family transposase ISSod8 | Transposase |
| AVI54_RS16735 () | 75832..76098 | + | 267 | WP_036771293.1 | IS3 family transposase ISLpn8 | Transposase |
| AVI54_RS16745 () | 76644..77372 | - | 729 | WP_048876210.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16750 () | 77413..77583 | - | 171 | WP_081000019.1 | integrase core domain-containing protein | - |
| AVI54_RS16755 () | 77659..78636 | - | 978 | WP_036771347.1 | IS5 family transposase ISLlo3 | Transposase |
| AVI54_RS16760 () | 78718..79401 | + | 684 | WP_051929558.1 | IS5 family transposase ISLlo3 | Transposase |
| AVI54_RS19775 () | 79429..79581 | - | 153 | WP_155046629.1 | hypothetical protein | - |
| AVI54_RS16765 () | 79983..81722 | + | 1740 | WP_016212146.1 | Phospholipase D | VF |
| AVI54_RS16770 () | 81725..82087 | + | 363 | WP_082304501.1 | hypothetical protein | - |
| AVI54_RS16775 () | 82117..82842 | + | 726 | Protein_108 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16780 () | 82908..83033 | - | 126 | Protein_109 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| AVI54_RS16785 () | 83037..83723 | - | 687 | WP_017377658.1 | Fic family protein | - |
| AVI54_RS16790 () | 84069..84689 | - | 621 | WP_080963659.1 | ABC transporter permease | - |
| AVI54_RS16795 () | 84668..85396 | - | 729 | WP_036772434.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI54_RS16800 () | 85484..85870 | - | 387 | WP_017377656.1 | type II toxin-antitoxin system VapC family toxin | - |
| AVI54_RS16805 () | 85867..86112 | - | 246 | WP_017377655.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AVI54_RS16810 () | 86454..87548 | - | 1095 | WP_157894754.1 | replication initiation protein | - |
| AVI54_RS16815 () | 88535..88753 | + | 219 | WP_017375840.1 | hypothetical protein | - |
| AVI54_RS16820 () | 88750..89202 | + | 453 | WP_017375839.1 | hypothetical protein | - |
| AVI54_RS16825 () | 89216..89554 | + | 339 | WP_027243184.1 | hypothetical protein | - |
| AVI54_RS20520 () | 89547..89684 | - | 138 | WP_157894755.1 | hypothetical protein | - |
| AVI54_RS20525 () | 89798..89962 | - | 165 | WP_155046641.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|