MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33546 bp
Accession: NZ_CP013785 Location: 1..33546 Organism: Piscirickettsia salmonis strain PM49811B Replicon: plasmid p4PS6
Accession: NZ_CP013785 Location: 1..33546 Organism: Piscirickettsia salmonis strain PM49811B Replicon: plasmid p4PS6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI53_RS20605 () | 779..934 | - | 156 | WP_168183246.1 | hypothetical protein | - |
| AVI53_RS18045 () | 1098..1577 | + | 480 | WP_075316673.1 | hypothetical protein | - |
| AVI53_RS18050 () | 1714..2046 | - | 333 | Protein_3 | phage major capsid protein | - |
| AVI53_RS19940 () | 2200..3178 | + | 979 | Protein_4 | IS30 family transposase | - |
| AVI53_RS18060 () | 3198..3383 | - | 186 | WP_027242948.1 | hypothetical protein | - |
| AVI53_RS19945 () | 3415..3615 | - | 201 | WP_155764745.1 | P27 family phage terminase small subunit | - |
| AVI53_RS18070 () | 3628..3864 | - | 237 | WP_075316674.1 | hypothetical protein | - |
| AVI53_RS18075 () | 3951..4334 | - | 384 | WP_027242950.1 | HNH endonuclease | - |
| AVI53_RS18080 () | 4547..5011 | - | 465 | WP_036774306.1 | hypothetical protein | - |
| AVI53_RS18085 () | 5011..5412 | - | 402 | WP_075316675.1 | hypothetical protein | - |
| AVI53_RS20610 () | 5660..5806 | + | 147 | WP_169834793.1 | hypothetical protein | - |
| AVI53_RS18090 () | 6038..7012 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI53_RS18095 () | 7110..7457 | - | 348 | WP_027242952.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI53_RS18100 () | 7450..7704 | - | 255 | WP_027242953.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI53_RS18105 () | 7849..8214 | - | 366 | WP_027242954.1 | hypothetical protein | - |
| AVI53_RS18110 () | 8411..8638 | - | 228 | Protein_16 | hypothetical protein | - |
| AVI53_RS18115 () | 8747..9721 | - | 975 | WP_069971681.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI53_RS18120 () | 9898..10251 | - | 354 | WP_016211078.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVI53_RS18125 () | 10244..10504 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVI53_RS18130 () | 10735..11325 | + | 591 | WP_016212329.1 | site-specific integrase | - |
| AVI53_RS18135 () | 11391..11747 | - | 357 | WP_075278739.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI53_RS18140 () | 11861..12835 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI53_RS18145 () | 12832..13275 | - | 444 | WP_178099494.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI53_RS20615 () | 13480..13755 | - | 276 | WP_171824216.1 | IS701 family transposase ISAba11 | Transposase |
| AVI53_RS18155 () | 14261..15244 | - | 984 | WP_016211499.1 | ParB/RepB/Spo0J family partition protein | - |
| AVI53_RS18160 () | 15260..16237 | - | 978 | WP_027242956.1 | Sporulation initiation inhibitor protein Soj | VF |
| AVI53_RS18165 () | 16467..17516 | + | 1050 | WP_027242957.1 | hypothetical protein | - |
| AVI53_RS18170 () | 17615..17845 | + | 231 | WP_027242958.1 | hypothetical protein | - |
| AVI53_RS18175 () | 18060..18929 | + | 870 | WP_027242959.1 | hypothetical protein | - |
| AVI53_RS18180 () | 19027..19878 | - | 852 | WP_051929859.1 | IS982 family transposase ISPsa1 | Transposase |
| AVI53_RS18185 () | 20271..20453 | - | 183 | WP_036771335.1 | hypothetical protein | - |
| AVI53_RS18190 () | 20496..21470 | - | 975 | WP_036771332.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI53_RS18195 () | 21564..21893 | - | 330 | Protein_33 | hypothetical protein | - |
| AVI53_RS19955 () | 22038..22178 | - | 141 | WP_144420852.1 | phosphatase | - |
| AVI53_RS18200 () | 22187..22483 | - | 297 | Protein_35 | hypothetical protein | - |
| AVI53_RS18205 () | 22569..23543 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI53_RS19960 () | 23563..23724 | - | 162 | WP_155046645.1 | hypothetical protein | - |
| AVI53_RS18210 () | 23724..24377 | - | 654 | WP_027242941.1 | DUF4376 domain-containing protein | - |
| AVI53_RS18215 () | 24389..24766 | - | 378 | WP_048876242.1 | hypothetical protein | - |
| AVI53_RS18220 () | 25251..26225 | + | 975 | WP_036773116.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI53_RS18225 () | 26245..26922 | - | 678 | WP_027242942.1 | hypothetical protein | - |
| AVI53_RS18230 () | 26922..27977 | - | 1056 | WP_062365785.1 | hypothetical protein | - |
| AVI53_RS18235 () | 28122..30098 | - | 1977 | WP_048876241.1 | host specificity protein J | - |
| AVI53_RS18240 () | 30369..30785 | - | 417 | WP_027242943.1 | hypothetical protein | - |
| AVI53_RS18245 () | 30782..31339 | - | 558 | WP_027242944.1 | tail assembly protein | - |
| AVI53_RS18250 () | 31685..32200 | + | 516 | WP_027242945.1 | hypothetical protein | - |
| AVI53_RS18255 () | 32222..32830 | - | 609 | Protein_47 | C40 family peptidase | - |
| AVI53_RS18260 () | 33004..33249 | - | 246 | WP_171824220.1 | phage head-tail connector protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|