MGE detailed information
MGE type: IScluster/Tn MGE length: 31346 bp
Accession: NZ_CP013782 Location: 54045..85390 Organism: Piscirickettsia salmonis strain PM49811B Replicon: plasmid p1PS6
Accession: NZ_CP013782 Location: 54045..85390 Organism: Piscirickettsia salmonis strain PM49811B Replicon: plasmid p1PS6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI53_RS16595 () | 49807..50037 | - | 231 | WP_144420845.1 | hypothetical protein | - |
| AVI53_RS16600 () | 50165..50617 | - | 453 | WP_027242936.1 | hypothetical protein | - |
| AVI53_RS16605 () | 50614..50832 | - | 219 | WP_027242937.1 | hypothetical protein | - |
| AVI53_RS16610 () | 51139..51348 | - | 210 | WP_017375841.1 | hypothetical protein | - |
| AVI53_RS16620 () | 51793..52101 | - | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| AVI53_RS16625 () | 52103..52471 | - | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVI53_RS16630 () | 52885..53856 | - | 972 | WP_048876229.1 | IS91 family transposase | - |
| AVI53_RS18665 () | 53775..53975 | - | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| AVI53_RS16635 () | 54045..54773 | - | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16640 () | 55133..55909 | + | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AVI53_RS20560 () | 56121..56288 | - | 168 | WP_169834792.1 | hypothetical protein | - |
| AVI53_RS16650 () | 56326..56862 | + | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| AVI53_RS16655 () | 57196..57807 | + | 612 | Protein_77 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS19830 () | 58069..58212 | + | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS19835 () | 58280..58456 | + | 177 | Protein_79 | IS30 family transposase ISAs2 | Transposase |
| AVI53_RS16660 () | 59105..59575 | + | 471 | WP_036771289.1 | hypothetical protein | - |
| AVI53_RS16665 () | 59657..60386 | + | 730 | Protein_81 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16670 () | 60429..61256 | - | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI53_RS20565 () | 61669..61848 | + | 180 | WP_157894752.1 | hypothetical protein | - |
| AVI53_RS16685 () | 62028..63092 | + | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI53_RS16690 () | 63661..64389 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16695 () | 64465..64737 | - | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVI53_RS16700 () | 64741..65001 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVI53_RS19840 () | 65341..65505 | + | 165 | Protein_88 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16710 () | 65791..66357 | + | 567 | Protein_89 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16715 () | 66423..67055 | - | 633 | Protein_90 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS19845 () | 67125..67292 | + | 168 | Protein_91 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16725 () | 67343..67549 | - | 207 | Protein_92 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16730 () | 67633..68283 | - | 651 | WP_155046631.1 | hypothetical protein | - |
| AVI53_RS16735 () | 68358..69335 | + | 978 | WP_036771347.1 | IS5 family transposase ISLlo3 | Transposase |
| AVI53_RS16740 () | 69463..70191 | - | 729 | WP_036771359.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16745 () | 70374..71660 | - | 1287 | WP_017375754.1 | hypothetical protein | - |
| AVI53_RS19850 () | 71681..71845 | - | 165 | WP_155046630.1 | hypothetical protein | - |
| AVI53_RS16750 () | 72262..72384 | - | 123 | WP_082884401.1 | IS3 family transposase | - |
| AVI53_RS16755 () | 72482..73210 | - | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16760 () | 73430..73552 | + | 123 | Protein_100 | IS6 family transposase ISSba18 | Transposase |
| AVI53_RS16765 () | 73632..75530 | + | 1899 | WP_036772437.1 | DUF1561 family protein | - |
| AVI53_RS16775 () | 75826..76092 | + | 267 | WP_036771293.1 | IS3 family transposase ISLpn8 | Transposase |
| AVI53_RS16785 () | 76638..77366 | - | 729 | WP_048876210.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16790 () | 77407..77577 | - | 171 | WP_081000019.1 | integrase core domain-containing protein | - |
| AVI53_RS16795 () | 77653..78630 | - | 978 | WP_036771347.1 | IS5 family transposase ISLlo3 | Transposase |
| AVI53_RS16800 () | 78712..79395 | + | 684 | WP_051929558.1 | IS5 family transposase ISLlo3 | Transposase |
| AVI53_RS19855 () | 79423..79575 | - | 153 | WP_155046629.1 | hypothetical protein | - |
| AVI53_RS16805 () | 79977..81716 | + | 1740 | WP_016212146.1 | Phospholipase D | VF |
| AVI53_RS16810 () | 81719..82081 | + | 363 | WP_082304501.1 | hypothetical protein | - |
| AVI53_RS16815 () | 82111..82836 | + | 726 | Protein_110 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16820 () | 82902..83027 | - | 126 | Protein_111 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| AVI53_RS16825 () | 83031..83717 | - | 687 | WP_017377658.1 | Fic family protein | - |
| AVI53_RS16830 () | 84063..84683 | - | 621 | WP_080963659.1 | ABC transporter permease | - |
| AVI53_RS16835 () | 84662..85390 | - | 729 | WP_036772434.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI53_RS16840 () | 85478..85864 | - | 387 | WP_017377656.1 | type II toxin-antitoxin system VapC family toxin | - |
| AVI53_RS16845 () | 85861..86106 | - | 246 | WP_017377655.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AVI53_RS16850 () | 86448..87542 | - | 1095 | WP_157894754.1 | replication initiation protein | - |
| AVI53_RS16855 () | 88529..88747 | + | 219 | WP_017375840.1 | hypothetical protein | - |
| AVI53_RS16860 () | 88792..89196 | + | 405 | WP_052133264.1 | hypothetical protein | - |
| AVI53_RS16865 () | 89210..89548 | + | 339 | WP_027243184.1 | hypothetical protein | - |
| AVI53_RS20570 () | 89541..89678 | - | 138 | WP_157894755.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|