MGE detailed information
MGE type: Genomic_island MGE length: 34866 bp
Accession: NZ_CP013483 Location: 4168267..4203132 Organism: Escherichia coli strain Y5 Replicon: chromosome
Accession: NZ_CP013483 Location: 4168267..4203132 Organism: Escherichia coli strain Y5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATO45_RS20525 () | 4163290..4164597 | - | 1308 | WP_000022200.1 | sugar ABC transporter permease | - |
| ATO45_RS20530 () | 4164660..4165892 | - | 1233 | WP_000742442.1 | extracellular solute-binding protein | - |
| ATO45_RS20535 () | 4166249..4167358 | + | 1110 | WP_016243364.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| ATO45_RS20540 () | 4167502..4167732 | + | 231 | Protein_3889 | IS4/IS5 family transposase | - |
| ATO45_RS25960 () | 4167811..4167930 | + | 120 | Protein_3890 | IS481 family transposase | - |
| ATO45_RS20550 () | 4168424..4169758 | + | 1335 | Protein_3891 | group II intron reverse transcriptase/maturase | - |
| ATO45_RS20555 () | 4170084..4170647 | - | 564 | WP_000282099.1 | inovirus-type Gp2 protein | - |
| ATO45_RS20560 () | 4171506..4172939 | - | 1434 | WP_042047126.1 | DUF3987 domain-containing protein | - |
| ATO45_RS25965 () | 4173152..4173407 | - | 256 | Protein_3894 | DUF3987 domain-containing protein | - |
| ATO45_RS20565 () | 4173513..4173740 | - | 228 | WP_000270169.1 | AlpA family phage regulatory protein | - |
| ATO45_RS20570 () | 4174433..4176064 | + | 1632 | WP_001310566.1 | hypothetical protein | - |
| ATO45_RS20575 () | 4176151..4176732 | - | 582 | WP_001310565.1 | hypothetical protein | - |
| ATO45_RS20585 () | 4177248..4178501 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| ATO45_RS20590 () | 4178513..4179616 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| ATO45_RS20595 () | 4179904..4180959 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| ATO45_RS20600 () | 4180998..4181399 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| ATO45_RS20605 () | 4181457..4182701 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 4182117..4182197 | - | 81 | NuclAT_11 | - | - |
| - () | 4182117..4182197 | - | 81 | NuclAT_11 | - | - |
| - () | 4182117..4182197 | - | 81 | NuclAT_11 | - | - |
| - () | 4182117..4182197 | - | 81 | NuclAT_11 | - | - |
| ATO45_RS20610 () | 4182793..4183251 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| ATO45_RS20615 () | 4183512..4184969 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| ATO45_RS20620 () | 4185026..4185547 | - | 522 | Protein_3905 | peptide chain release factor H | - |
| ATO45_RS20625 () | 4185543..4185749 | - | 207 | Protein_3906 | RtcB family protein | - |
| ATO45_RS20630 () | 4186067..4186519 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| ATO45_RS20635 () | 4186529..4186927 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| ATO45_RS20640 () | 4186930..4187223 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| ATO45_RS20645 () | 4187275..4188330 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| ATO45_RS20650 () | 4188401..4189186 | - | 786 | WP_000207552.1 | putative lateral flagellar export/assembly protein LafU | - |
| ATO45_RS20655 () | 4189158..4190870 | + | 1713 | Protein_3912 | flagellar biosynthesis protein FlhA | - |
| ATO45_RS20660 () | 4191094..4191591 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| ATO45_RS20665 () | 4191767..4192516 | - | 750 | WP_000056849.1 | C40 family peptidase | - |
| ATO45_RS20670 () | 4192726..4192986 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| ATO45_RS20675 () | 4192989..4193267 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| ATO45_RS20680 () | 4193423..4194163 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| ATO45_RS20685 () | 4194134..4194901 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| ATO45_RS20690 () | 4195107..4195685 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| ATO45_RS20695 () | 4195925..4198369 | + | 2445 | WP_000973083.1 | acyl-CoA dehydrogenase FadE | - |
| ATO45_RS20700 () | 4198412..4198858 | - | 447 | WP_059328196.1 | Ivy family C-type lysozyme inhibitor | - |
| ATO45_RS20705 () | 4199039..4199809 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| ATO45_RS20710 () | 4199995..4201203 | + | 1209 | WP_000343717.1 | IS256 family transposase | - |
| ATO45_RS20715 () | 4201239..4202309 | - | 1071 | Protein_3924 | ISAs1 family transposase | - |
| ATO45_RS20720 () | 4202740..4203132 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| ATO45_RS20725 () | 4203110..4207342 | - | 4233 | WP_000508724.1 | RHS repeat protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|