MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 155682 bp
Accession: NZ_CP013185 Location: 715778..871459 Organism: Escherichia coli strain FORC_029 Replicon: chromosome
Accession: NZ_CP013185 Location: 715778..871459 Organism: Escherichia coli strain FORC_029 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC29_RS03695 () | 711764..713197 | + | 1434 | WP_000869178.1 | bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE | - |
| - () | 713277..713418 | + | 142 | NuclAT_6 | - | - |
| - () | 713277..713418 | + | 142 | NuclAT_6 | - | - |
| - () | 713277..713418 | + | 142 | NuclAT_6 | - | - |
| - () | 713277..713418 | + | 142 | NuclAT_6 | - | - |
| FORC29_RS03700 () | 713317..713376 | - | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - () | 713653..713794 | + | 142 | NuclAT_1 | - | - |
| - () | 713653..713794 | + | 142 | NuclAT_1 | - | - |
| - () | 713653..713794 | + | 142 | NuclAT_1 | - | - |
| - () | 713653..713794 | + | 142 | NuclAT_1 | - | - |
| - () | 713653..713794 | + | 142 | NuclAT_7 | - | - |
| - () | 713653..713794 | + | 142 | NuclAT_7 | - | - |
| - () | 713653..713794 | + | 142 | NuclAT_7 | - | - |
| - () | 713653..713794 | + | 142 | NuclAT_7 | - | - |
| FORC29_RS03710 () | 713693..713752 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| FORC29_RS03715 () | 713991..715652 | - | 1662 | WP_000341046.1 | flotillin family protein | - |
| FORC29_RS03720 () | 715679..716308 | - | 630 | WP_000599947.1 | DUF1449 family protein | - |
| FORC29_RS03725 () | 716577..716777 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| FORC29_RS03730 () | 716820..717884 | - | 1065 | WP_001269793.1 | fimbrial protein | - |
| FORC29_RS03735 () | 717886..718635 | - | 750 | WP_001387080.1 | hypothetical protein | VF |
| FORC29_RS03740 () | 718651..721155 | - | 2505 | WP_000277116.1 | Basal-body rod modification protein FlgD | VF |
| FORC29_RS03745 () | 721215..721766 | - | 552 | WP_001272149.1 | hypothetical protein | VF |
| FORC29_RS03750 () | 722049..722339 | - | 291 | WP_001297598.1 | IS1182 family transposase ISBusp4 | Transposase |
| FORC29_RS03755 () | 722713..723366 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| FORC29_RS03760 () | 723627..723797 | + | 171 | WP_000469266.1 | hypothetical protein | - |
| FORC29_RS03765 () | 723855..724628 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| FORC29_RS03770 () | 724771..725559 | + | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| FORC29_RS03775 () | 725597..726757 | - | 1161 | WP_000442859.1 | glutathionylspermidine synthase family protein | - |
| FORC29_RS03780 () | 726763..727434 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| FORC29_RS03790 () | 727582..729063 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| FORC29_RS03795 () | 729268..729897 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| FORC29_RS03800 () | 729898..730320 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| FORC29_RS03805 () | 730345..731172 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| FORC29_RS03810 () | 731172..731753 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| FORC29_RS03815 () | 731782..733674 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| FORC29_RS03820 () | 733722..734036 | - | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| FORC29_RS03825 () | 734067..734648 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| FORC29_RS03830 () | 734967..735299 | + | 333 | WP_000912120.1 | DUF2645 family protein | - |
| FORC29_RS03835 () | 735345..736694 | - | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| FORC29_RS03840 () | 736691..737350 | - | 660 | WP_001221502.1 | 6-phosphogluconolactonase | VF |
| FORC29_RS03845 () | 737502..737894 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| FORC29_RS03850 () | 737947..738429 | + | 483 | WP_000183494.1 | transcriptional regulator | - |
| FORC29_RS03860 () | 738975..741233 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| FORC29_RS03865 () | 741466..742203 | + | 738 | WP_000965703.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| FORC29_RS03870 () | 742278..743690 | + | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| FORC29_RS03875 () | 743801..746020 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| FORC29_RS03880 () | 746063..746320 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| FORC29_RS03885 () | 746371..747297 | - | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| FORC29_RS03890 () | 747497..748324 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| FORC29_RS03895 () | 748429..749592 | - | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| FORC29_RS03900 () | 749786..750685 | + | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| FORC29_RS03905 () | 750725..751384 | - | 660 | WP_000268419.1 | DedA family protein | - |
| FORC29_RS03910 () | 751524..752711 | - | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| FORC29_RS03920 () | 752963..753697 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| FORC29_RS03925 () | 753704..754129 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| FORC29_RS03930 () | 754168..755052 | - | 885 | WP_000018758.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| FORC29_RS03935 () | 755243..755737 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| FORC29_RS03940 () | 755777..756817 | - | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| FORC29_RS03945 () | 756974..757861 | + | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| FORC29_RS03950 () | 757980..758267 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| FORC29_RS03960 () | 758456..759574 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| FORC29_RS03965 () | 759577..760563 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| FORC29_RS03970 () | 760553..761731 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| FORC29_RS03975 () | 761728..763431 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| FORC29_RS03980 () | 763431..763925 | + | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| FORC29_RS03985 () | 763918..764406 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| FORC29_RS03990 () | 764399..764740 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| FORC29_RS03995 () | 764753..765001 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| FORC29_RS04000 () | 765125..765991 | - | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| FORC29_RS04005 () | 766196..768055 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| FORC29_RS04015 () | 768347..769846 | + | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| FORC29_RS04020 () | 769895..770587 | - | 693 | WP_110093079.1 | thymidylate kinase | - |
| FORC29_RS04025 () | 770761..771474 | + | 714 | WP_001076097.1 | thymidylate kinase | - |
| FORC29_RS04030 () | 771506..772264 | + | 759 | WP_000339532.1 | hypothetical protein | - |
| FORC29_RS04035 () | 772310..773659 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| FORC29_RS04040 () | 773659..774483 | + | 825 | WP_000984978.1 | hypothetical protein | - |
| FORC29_RS04045 () | 774495..775055 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| FORC29_RS04050 () | 775086..776156 | + | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| FORC29_RS04055 () | 776153..777232 | + | 1080 | WP_001307395.1 | LPS export ABC transporter permease LptG | - |
| FORC29_RS04060 () | 777267..778439 | - | 1173 | WP_000524972.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| FORC29_RS04065 () | 778439..778687 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| FORC29_RS04070 () | 778719..779633 | - | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| FORC29_RS04075 () | 779630..781351 | - | 1722 | WP_001390306.1 | N-acylneuraminate cytidylyltransferase | VF |
| FORC29_RS04085 () | 781722..782864 | + | 1143 | WP_000388786.1 | DNA-binding protein | - |
| FORC29_RS04090 () | 782871..783635 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| FORC29_RS04095 () | 783886..785385 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| FORC29_RS04100 () | 785385..786437 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| FORC29_RS04105 () | 786448..787671 | + | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| FORC29_RS04110 () | 787676..788080 | + | 405 | WP_000853256.1 | protein GlcG | - |
| FORC29_RS04115 () | 788102..790273 | + | 2172 | WP_000084080.1 | malate synthase G | - |
| FORC29_RS04120 () | 790629..792311 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| FORC29_RS04130 () | 792797..797362 | + | 4566 | WP_001034491.1 | hypothetical protein | VF |
| FORC29_RS04135 () | 797502..798311 | + | 810 | WP_001365924.1 | hypothetical protein | VF |
| FORC29_RS04140 () | 798377..798787 | + | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| FORC29_RS04145 () | 798805..799764 | + | 960 | WP_000135063.1 | hypothetical protein | VF |
| FORC29_RS04150 () | 799794..801854 | + | 2061 | WP_000498829.1 | hypothetical protein | VF |
| FORC29_RS04155 () | 801854..803347 | + | 1494 | WP_000249348.1 | hypothetical protein | VF |
| FORC29_RS04160 () | 803347..804570 | + | 1224 | WP_001173453.1 | HTH-type transcriptional regulator DmlR | VF |
| FORC29_RS04165 () | 804587..805042 | + | 456 | WP_001087296.1 | hypothetical protein | VF |
| FORC29_RS04170 () | 805046..805609 | + | 564 | WP_001115140.1 | Putative 3-oxopropanoate dehydrogenase | VF |
| FORC29_RS04175 () | 805606..805977 | + | 372 | WP_000820125.1 | HTH-type transcriptional repressor NsrR | VF |
| FORC29_RS04180 () | 805974..806573 | + | 600 | WP_001255040.1 | Periplasmic dipeptide transport protein | VF |
| FORC29_RS04185 () | 806576..807553 | + | 978 | WP_000633238.1 | Dipeptide transport system permease protein DppB | VF |
| FORC29_RS04190 () | 807550..808728 | + | 1179 | WP_000094962.1 | Dipeptide transport system permease protein DppC | VF |
| FORC29_RS04195 () | 808730..809266 | + | 537 | WP_000942795.1 | Dipeptide transport ATP-binding protein DppD | VF |
| FORC29_RS04200 () | 809547..810389 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| FORC29_RS04205 () | 810474..810671 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| FORC29_RS04210 () | 810699..810896 | - | 198 | Protein_766 | hypothetical protein | - |
| FORC29_RS04215 () | 810893..811270 | - | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| FORC29_RS04220 () | 811317..811694 | - | 378 | WP_001285617.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| FORC29_RS04225 () | 811774..811995 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| FORC29_RS04230 () | 812082..812558 | - | 477 | WP_001388380.1 | RadC family protein | - |
| FORC29_RS04235 () | 812574..813047 | - | 474 | WP_000855081.1 | antirestriction protein | - |
| FORC29_RS04245 () | 813349..814167 | - | 819 | WP_001234605.1 | DUF945 domain-containing protein | - |
| FORC29_RS04255 () | 814267..814500 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| FORC29_RS04260 () | 814579..815034 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| FORC29_RS04265 () | 815110..817626 | - | 2517 | WP_001387066.1 | membrane protein | - |
| FORC29_RS04270 () | 817747..820866 | - | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| FORC29_RS04275 () | 821200..822072 | - | 873 | WP_001069724.1 | GTPase family protein | - |
| FORC29_RS04280 () | 822182..823201 | - | 1020 | WP_001388379.1 | hypothetical protein | - |
| FORC29_RS04295 () | 824380..824487 | - | 108 | Protein_779 | IS1 family transposase | - |
| FORC29_RS04305 () | 824696..825268 | - | 573 | WP_001170560.1 | hypothetical protein | - |
| FORC29_RS04310 () | 825354..825560 | - | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| FORC29_RS04315 () | 826259..826471 | + | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| FORC29_RS28085 () | 826711..826884 | - | 174 | WP_001387062.1 | hypothetical protein | - |
| FORC29_RS04325 () | 827088..827657 | + | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| FORC29_RS27780 () | 827695..827853 | + | 159 | WP_000493525.1 | hypothetical protein | - |
| FORC29_RS04330 () | 827825..828208 | + | 384 | WP_000271022.1 | hypothetical protein | - |
| FORC29_RS04335 () | 828198..828617 | + | 420 | WP_001387059.1 | hypothetical protein | - |
| FORC29_RS04340 () | 828623..828805 | + | 183 | WP_001216313.1 | hypothetical protein | - |
| FORC29_RS04345 () | 828926..829549 | + | 624 | WP_001260266.1 | hypothetical protein | - |
| FORC29_RS04350 () | 829645..829878 | + | 234 | WP_000124181.1 | hypothetical protein | - |
| FORC29_RS04355 () | 829931..830122 | - | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| FORC29_RS04360 () | 830629..831126 | + | 498 | WP_000098939.1 | hypothetical protein | VF |
| FORC29_RS04365 () | 831148..832509 | + | 1362 | WP_000930193.1 | hypothetical protein | VF |
| FORC29_RS04370 () | 832611..833855 | + | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| FORC29_RS04375 () | 834091..835836 | + | 1746 | WP_001390303.1 | AAA family ATPase | - |
| FORC29_RS04380 () | 835901..836206 | + | 306 | WP_001420595.1 | hypothetical protein | - |
| FORC29_RS04385 () | 836321..836488 | + | 168 | Protein_797 | transcriptional regulator | - |
| FORC29_RS04390 () | 836567..836836 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| FORC29_RS04395 () | 836857..837501 | + | 645 | WP_001387055.1 | hypothetical protein | - |
| FORC29_RS04400 () | 837567..837890 | + | 324 | WP_001387054.1 | hypothetical protein | - |
| FORC29_RS04405 () | 837921..838500 | - | 580 | Protein_801 | transposase family protein | - |
| FORC29_RS04415 () | 838710..839096 | + | 387 | WP_014966195.1 | hypothetical protein | - |
| FORC29_RS04420 () | 839074..839199 | + | 126 | WP_001420591.1 | hypothetical protein | - |
| FORC29_RS04425 () | 839205..840221 | - | 1017 | Protein_804 | IS630 family transposase | - |
| FORC29_RS04430 () | 840617..841093 | + | 477 | WP_000072549.1 | hypothetical protein | VF |
| FORC29_RS04435 () | 841096..842574 | + | 1479 | WP_000215053.1 | putative transport protein HsrA | VF |
| FORC29_RS04440 () | 842584..843090 | + | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| FORC29_RS04445 () | 843100..843522 | + | 423 | WP_000555547.1 | hypothetical protein | - |
| FORC29_RS04450 () | 843515..845317 | + | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| FORC29_RS04455 () | 845308..846240 | + | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| FORC29_RS04460 () | 846253..848235 | + | 1983 | WP_000198270.1 | type VI secretion system tip protein VgrG | - |
| FORC29_RS04465 () | 848246..848713 | + | 468 | WP_000005080.1 | hypothetical protein | - |
| FORC29_RS04470 () | 848723..849022 | + | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| FORC29_RS04475 () | 849026..850102 | + | 1077 | WP_001033155.1 | HTH-type transcriptional regulator GltR | VF |
| FORC29_RS04480 () | 850110..850661 | + | 552 | WP_000152746.1 | type VI secretion lipoprotein TssJ | - |
| FORC29_RS04485 () | 850680..852092 | + | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| FORC29_RS04495 () | 852431..853021 | + | 591 | WP_001028113.1 | Ribosomal RNA small subunit methyltransferase E | VF |
| FORC29_RS04500 () | 853027..856431 | + | 3405 | WP_000914956.1 | type VI secretion protein | - |
| FORC29_RS04505 () | 856435..858984 | + | 2550 | WP_000029846.1 | hypothetical protein | VF |
| FORC29_RS04510 () | 859181..860392 | + | 1212 | Protein_820 | IS3 family transposase | - |
| FORC29_RS04525 () | 861529..862691 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| FORC29_RS28090 () | 863416..863982 | + | 567 | WP_000587872.1 | hypothetical protein | - |
| FORC29_RS04535 () | 864047..864327 | + | 281 | Protein_823 | transposase | - |
| FORC29_RS04540 () | 864461..865615 | + | 1155 | WP_000359994.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| FORC29_RS04550 () | 866481..866651 | - | 171 | Protein_825 | ATP-dependent helicase | - |
| FORC29_RS04555 () | 866681..866869 | - | 189 | Protein_826 | IS66 family transposase IS682 | Transposase |
| FORC29_RS04560 () | 866930..868063 | + | 1134 | WP_000555380.1 | IS110 family transposase ISEc45 | Transposase |
| FORC29_RS04565 () | 868103..868465 | + | 363 | WP_077577697.1 | IS3 family transposase | - |
| FORC29_RS04570 () | 868469..868612 | + | 144 | Protein_829 | IS3 family transposase | - |
| FORC29_RS04575 () | 868798..868986 | - | 189 | Protein_830 | IS66 family transposase | - |
| FORC29_RS04580 () | 869047..870180 | + | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| FORC29_RS04585 () | 870434..871858 | - | 1425 | Protein_832 | IS66-like element ISEc43 family transposase | - |
| FORC29_RS04590 () | 871889..872239 | - | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FORC29_RS04595 () | 872236..872670 | - | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| FORC29_RS04600 () | 872758..873210 | + | 453 | Protein_835 | transposase | - |
| FORC29_RS04605 () | 873249..873491 | + | 243 | Protein_836 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|