MGE detailed information
MGE type: Prophage MGE length: 17151 bp
Accession: NZ_CP013124 Location: 3887628..3904778 Organism: Pseudomonas mendocina S5.2 Replicon: chromosome
Accession: NZ_CP013124 Location: 3887628..3904778 Organism: Pseudomonas mendocina S5.2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DW68_RS18105 () | 3882921..3883796 | + | 876 | WP_017361887.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| DW68_RS18120 () | 3884075..3885016 | + | 942 | WP_026041935.1 | ribose-phosphate pyrophosphokinase | - |
| DW68_RS18125 () | 3885124..3885738 | + | 615 | WP_013714251.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| DW68_RS18130 () | 3885799..3886389 | + | 591 | WP_013714250.1 | aminoacyl-tRNA hydrolase | - |
| DW68_RS18135 () | 3886415..3887515 | + | 1101 | WP_013714249.1 | redox-regulated ATPase YchF | - |
| DW68_RS25750 () | 3887637..3888692 | + | 1056 | WP_143498958.1 | hypothetical protein | - |
| DW68_RS18140 () | 3888952..3889935 | - | 984 | WP_017361238.1 | hypothetical protein | - |
| DW68_RS18145 () | 3889932..3891008 | - | 1077 | WP_081101719.1 | DUF262 domain-containing protein | - |
| DW68_RS25550 () | 3891019..3892356 | - | 1338 | WP_172825340.1 | N-6 DNA methylase | - |
| DW68_RS18155 () | 3892860..3893132 | + | 273 | WP_170965270.1 | helix-turn-helix domain-containing protein | - |
| DW68_RS18160 () | 3893125..3893346 | + | 222 | WP_017361242.1 | hypothetical protein | - |
| DW68_RS25930 () | 3893542..3893841 | + | 300 | WP_172825341.1 | DUF5447 family protein | - |
| DW68_RS25935 () | 3894112..3894429 | + | 318 | WP_017361244.1 | hypothetical protein | - |
| DW68_RS18175 () | 3894684..3895049 | + | 366 | WP_017361245.1 | hypothetical protein | - |
| DW68_RS18180 () | 3895065..3895244 | + | 180 | WP_017361246.1 | hypothetical protein | - |
| DW68_RS25760 () | 3895660..3897138 | + | 1479 | WP_155718709.1 | hypothetical protein | - |
| DW68_RS18190 () | 3897140..3897478 | + | 339 | WP_017361249.1 | DUF2523 domain-containing protein | - |
| DW68_RS18195 () | 3897480..3898571 | + | 1092 | WP_017361250.1 | hypothetical protein | - |
| DW68_RS18200 () | 3898581..3898865 | + | 285 | WP_017361251.1 | hypothetical protein | - |
| DW68_RS18205 () | 3899078..3900361 | + | 1284 | WP_017361252.1 | hypothetical protein | - |
| DW68_RS18210 () | 3900358..3901353 | + | 996 | WP_017361253.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DW68_RS18215 () | 3901406..3901648 | + | 243 | WP_017361254.1 | Arc family DNA-binding protein | Antitoxin Detail |
| DW68_RS18220 () | 3901648..3902067 | + | 420 | WP_017361255.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DW68_RS25765 () | 3902479..3902688 | + | 210 | WP_155718710.1 | hypothetical protein | - |
| DW68_RS18235 () | 3902685..3903041 | - | 357 | WP_013714231.1 | excalibur calcium-binding domain-containing protein | - |
| DW68_RS25940 () | 3903178..3903342 | + | 165 | WP_017361256.1 | hypothetical protein | - |
| DW68_RS18240 () | 3903368..3903814 | + | 447 | WP_017361257.1 | hypothetical protein | - |
| DW68_RS18245 () | 3903864..3904778 | - | 915 | WP_017361258.1 | DMT family transporter | - |
| DW68_RS18250 () | 3904985..3906901 | - | 1917 | WP_017361259.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| DW68_RS25945 () | 3907074..3907238 | + | 165 | WP_013714226.1 | hypothetical protein | - |
| DW68_RS18255 () | 3907460..3907909 | - | 450 | WP_017361260.1 | molybdopterin synthase catalytic subunit MoaE | - |
| DW68_RS18260 () | 3907999..3908241 | - | 243 | WP_017361261.1 | MoaD/ThiS family protein | - |
| DW68_RS18265 () | 3908238..3908714 | - | 477 | WP_013714224.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|